Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00252 ATGAGAGAAATAAGCAACGCCATTGTCGTCATAAAGTGGAAGATAGCAGAGTTTCTTGCCTTCATCTTCAGCTATATTCATCTGTTTGTTGCCGGCACATCAGGCAATACATGGATACTTCATTTGTTAAGCTATATAATCTGGCTTACCTGTAGCCAGTTTCTCTCTCCCAAACAAACCTCTCCAATGGAACAGCAACTTCAAACCCTCTCTTCCAAACCCACTTGGCTTCTCTTCCTGTCCTCCATCGGCCTCGTCGTCTTCCTCAAACATTTTACCACTCTGCTCAAATGGGTTTTTCATTCTTTTTTCCGACCTCCAAAGAACCTCAGAAACTACGGCGGTTGGGCCTTAATAACCGGCGCTACTGATGGCATCGGCAAGTCGTTTGCCCACCAACTGGCCGGAGAAGGCCTCAACCTCATCCTCGTCAGCCGGAGCTTCGACAAGCTCCGAACAGTTTCCGACGAAATTCAAACTCACTTCCCCAACACCCGCGTAAAAACCATCGTCTTCGATTTCACACAAGACATCGCAGTCGGCGTTCAAAAGATAAAGGAAGTGACCAGAGATCTGGACGTCGGAATACTGATAAACAACGTCGGAATCACATACCGGAAAGCCAGTTTTTTCCACGAGGTGGATGAAACAGTTTGGATGAACGTCGTGAAAGTGAATTTGGCTGGAACCACCATTGTTACACGAGCTCTTCTCCCATTGATGCTAGCGAGGAAGAAAGGAGCGATCGTGAATATTGGATCGGGAGCAGGCAGTGTTCTTCCTTCTCACCCTCTCTACGCAGTTTATGCAGCCACAAAAGCATACGTCGACCAATTCTCGAGATGTTTGCACGTGGAGTACAAGAATCATGGAATAGATGTGCAGTGTCAGGTACCGTTGTATGTTGCCACGAAAATGGTGTCGAAAGTGGCATCAGTGGAAGGGCCATCGTTGTTCATCCCCACGGCAGACGCATATGCGAGATCTGCTATTCATCGAATCGGATTCGAATCCCACTGCATTCCTTATTGGTCTCACGCTCTTCAGTCCGTCTTCGTCGGCTTGCTTCCAGAGGCTATCTTGGATGCTTGTCGTTTAACAGTCGGACTCCAACGTAGGGAAAAACAAGTTACTTGA 1137 47.58 MREISNAIVVIKWKIAEFLAFIFSYIHLFVAGTSGNTWILHLLSYIIWLTCSQFLSPKQTSPMEQQLQTLSSKPTWLLFLSSIGLVVFLKHFTTLLKWVFHSFFRPPKNLRNYGGWALITGATDGIGKSFAHQLAGEGLNLILVSRSFDKLRTVSDEIQTHFPNTRVKTIVFDFTQDIAVGVQKIKEVTRDLDVGILINNVGITYRKASFFHEVDETVWMNVVKVNLAGTTIVTRALLPLMLARKKGAIVNIGSGAGSVLPSHPLYAVYAATKAYVDQFSRCLHVEYKNHGIDVQCQVPLYVATKMVSKVASVEGPSLFIPTADAYARSAIHRIGFESHCIPYWSHALQSVFVGLLPEAILDACRLTVGLQRREKQVT 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2515983 2517930 + Bma013237.1 Bma15g00252 96374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00252 378 Gene3D - 111 346 - -
Bma15g00252 378 PIRSF 11-beta-HSD1 66 378 - -
Bma15g00252 378 PRINTS Glucose/ribitol dehydrogenase family signature 192 203 IPR002347 -
Bma15g00252 378 PRINTS Glucose/ribitol dehydrogenase family signature 116 133 IPR002347 -
Bma15g00252 378 PRINTS Glucose/ribitol dehydrogenase family signature 269 288 IPR002347 -
Bma15g00252 378 PRINTS Glucose/ribitol dehydrogenase family signature 290 307 IPR002347 -
Bma15g00252 378 PRINTS Glucose/ribitol dehydrogenase family signature 241 257 IPR002347 -
Bma15g00252 378 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 192 203 IPR002347 -
Bma15g00252 378 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 247 255 IPR002347 -
Bma15g00252 378 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 269 288 IPR002347 -
Bma15g00252 378 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 76 377 - -
Bma15g00252 378 Pfam short chain dehydrogenase 116 311 IPR002347 -
Bma15g00252 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 368 IPR036291 -
Bma15g00252 378 PANTHER RH59310P 76 377 - -
Bma15g00252 378 CDD 17beta-HSD1_like_SDR_c 114 360 - -
Bma15g00252 378 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 256 284 IPR020904 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00029 Bma15g00252 CCT
Bma14g01626 Bma15g00252 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00029 Bma-Chr1:395317 Bma15g00252 Bma-Chr15:2515983 1.29E-125 dispersed
Bma03g01109 Bma-Chr3:14390742 Bma15g00252 Bma-Chr15:2515983 2.91E-19 dispersed
Bma12g00757 Bma-Chr12:34539762 Bma15g00252 Bma-Chr15:2515983 5.08E-106 dispersed
Bma15g00075 Bma-Chr15:867652 Bma15g00252 Bma-Chr15:2515983 4.49E-15 dispersed
Bma15g00252 Bma-Chr15:2515983 Bma07g01552 Bma-Chr7:50999186 1.23E-12 dispersed
Bma15g00252 Bma-Chr15:2515983 Bma05g01328 Bma-Chr5:52852573 1.45E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00252 K10251 - qsu:112015935 420.624