Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00260 CTTCACTCCATGGGAACCTACCTGCAAATTCCGGCAGAAGCCGAGGACCAACACATATTCCGTAGCCATTTTCCGGCCGTTCAAGTGCCGGAAAACATCACGCTGCCAGAATTCGTGCTCCAAGATGCCGAATTATACGCAAACAAGGTCGCGTTAGTGGAGGCTTTAACGGGGAAGGAGATTACGTATGGAGAAGTTGTTCGAGACACGAAGAGGCTTTCAAAGGCCTTGAGATCTTTGGGTTTGAGAAAGGGTCAAGTTGTTATAGTTTTACTCCCAAATGTTGCAGAATACCCCATTGTTGTTCTTGGAATAATGAGCTCCGGCGGCGTGTTTTCCGGTGCGAACCCTTCTGCTCACTCTTCTGAAATCAAAAAGCAAGTTGAGGTTGCAGAGGCAAAACTTATTATCACCAATGGCTCAAACTATGAAAAGGTTAAGGGTCTTGATCTTCCAGTCATCATACTCGGCGAAGAACCGATTGAAGGGGCGATGAATTGGGACAAGCTGCTCGAGGCAGCAGATCGAGCCGGCACCGAAATAAGCTCGGTCGAATCCATACAACAGACCGATCTATGTGCATTGCCATTCTCATCAGGCACAACAGGAGTATCAAAAGGTGTAATGTTAAGTCATAGAAATCTGGTGGCTAATCTCTGCTCCACACTGTTTAACGTGCCGAAAGAAATGGTGGGTCAAGTCACAACGCTTGGTTTAATCCCATTATTTCACATTTATGGGATTACTGGAATTTGCTGTGCTACGCTTAGAAACAAGGGGAAAGTGGTGGTGATGGGGAGATTTGAGCTCAGAATGTTTCTCAATGCATTGATCACTCAGGAGGTCACTTTTGCTCCGATCGTGCCGCCGATTATCCTGGCTTTGGTCAAGAATCCAATTGTGGAGGAGTTTGATCTTACCAAGCTCAAACTCCAGGCCATTATGACCGCCGCTGCTCCCCTCGCACCGGAGCTTCTCTCGGCGTTTGAGAAAAAATTTCCCGGCGTCGATGTTCAGGAGGCGTATGGATTGACAGAGCACAGCTGCATCACGCTCAACTATGGCGGCATTGAAAGAGACAATGGCAGATTGAAGAAGAACACTGTGGGCCAAATTCTTCCCAATTTACTCGTCAAATTCATTGACCCTGAAACTGGTAGATCCTTACCCAAGAACACTCATGGTGAAATCTGCGTCAAAAGCCAGTGTGTGATGAAAGGGTATTTCAGAAACGAGGAGGAGACTTGCCGGACCATCAAGAATGGGTGGCTCCACACCGGCGACATTGGCTACATTGATGACGACGGGGATGTGTTCATCGTGGATCGCATCAAGGAATTAATCAAATACAAAGGCTTCCAAGTAGCTCCGGCCGAACTAGAAGCAATCTTACTCACTCACCCCTCCATTGAAGACGCAGCTGTAGTGCCGCTGCCGGACGAGGAGGCCGGAGAGATACCGGCGGCGAGCGTGGTGTTGGGTGCAAATGCAAAAGAGAGTGAAGAAGATATAATCAGATACGTCGCCTCCAACGTTGCCCATTACAGGAAAATCAGAGAGGTGCAATTTGTAGACAGCATTCCAAAATCTCCTTCTGGGAAAATAATGAGGAGGCTTATCAAGGACAGTACTGCAAAGGTGAAGGCCAAAGCTCATCCC 1659 47.92 LHSMGTYLQIPAEAEDQHIFRSHFPAVQVPENITLPEFVLQDAELYANKVALVEALTGKEITYGEVVRDTKRLSKALRSLGLRKGQVVIVLLPNVAEYPIVVLGIMSSGGVFSGANPSAHSSEIKKQVEVAEAKLIITNGSNYEKVKGLDLPVIILGEEPIEGAMNWDKLLEAADRAGTEISSVESIQQTDLCALPFSSGTTGVSKGVMLSHRNLVANLCSTLFNVPKEMVGQVTTLGLIPLFHIYGITGICCATLRNKGKVVVMGRFELRMFLNALITQEVTFAPIVPPIILALVKNPIVEEFDLTKLKLQAIMTAAAPLAPELLSAFEKKFPGVDVQEAYGLTEHSCITLNYGGIERDNGRLKKNTVGQILPNLLVKFIDPETGRSLPKNTHGEICVKSQCVMKGYFRNEEETCRTIKNGWLHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLTHPSIEDAAVVPLPDEEAGEIPAASVVLGANAKESEEDIIRYVASNVAHYRKIREVQFVDSIPKSPSGKIMRRLIKDSTAKVKAKAHP 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2567570 2569609 - Bma030774 Bma15g00260 96382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00260 553 CDD 4CL 29 538 - -
Bma15g00260 553 Pfam AMP-binding enzyme 42 450 IPR000873 -
Bma15g00260 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 546 - -
Bma15g00260 553 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Bma15g00260 553 Gene3D - 446 549 IPR045851 -
Bma15g00260 553 Gene3D - 17 445 IPR042099 -
Bma15g00260 553 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 12 546 - -
Bma15g00260 553 SUPERFAMILY Acetyl-CoA synthetase-like 17 545 - -
Bma15g00260 553 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00260 Bma-Chr15:2567570 Bma15g00435 Bma-Chr15:4732976 1.28E-124 dispersed
Bma15g00260 Bma-Chr15:2567570 Bma14g00445 Bma-Chr14:5144008 2.22E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00260 K01904 - qsu:112038127 838.565