Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00289 ATGCTCTCTTTCCGTCTGTTCTTGGTGGAACTTGTGCCATACCTGGAGCATTTGGTTGTGGAAAAACTGTCATTAGTCAAGCTCTTTCTAAGTACTCAAATTCTGACACTGTTGTTTACGTTGGTTGTGGGGAGAGAGGAAATGAAATGGCAGAAGGTTCTTATGGATTTTCCGCAATTGACAATGACATTACCCGATGGCCGTGAAGAATCTGTCATGAAACGTACTACACTTGTGGCAAACACTTCTAACATGCCTGTGGCTGCCCGTGAGGCTTCAATATATACTGGAATTACTATTGCTGAATACTTCAGAGATATGGGGTACAATGTCAGTATGATGGCAGATTCGACTTCTCGTTGGGCAGAAGCATTGCGCGAGATATCTGGACGACTGGCAGAAATGCCTGCAGATAGTGGCTATCCAGCTTATCTTGCGGCACGTTTAGCTTCTTTTTATGAGCGAGCGGGAAAAGTAAAATGTCTGGGAGGACCAGAACGTAATGGCAGTGTCACAATTGTTGGTGCTGTTTCACCTCCGGGAGGAGATTTTTCTGATCCTGTGACATCTGCAACCCTCAGCATTGTACAGGTTTTCTGGGGACTTGACAAAAAGCTTGCTCAGAGAAAGCATTTCCCATCTGTTAACTGGCTTATTTCTTACTCTAAATACTCAACTGCATTGGAATCCTTTTATGAGCAGTTTGACCAAGATTTTATTAGCATTAGGACGAAGGCCCGTGAGGTGCTACAAAGAGAAGATGACCTTAATGAGATTGTTCAACTTGTAGGAAAAGATGCCTTAGCTGAAGGAGATAAAATTACACTCGAGACTGCAAAACTTTTGAGAGAAGACTATCTAGCCCAGAATGCATTTACTCCATATGATAAATTCTGCCCATTCTATAAGTCTGTTTGGATGATGCGCAACATCATTCATTTCTATAATTTGGCCAATCAGGCAGTGGAGAGAGGCGCTGGTATGGATGGGCAGAAGATAACATACACTCTGATTAAGCATCGATTGGGAGATCTTTTTTATCGTCTGGTGTCTCAAAAATTTGAGGACCCAGCAGAAGGAGAGGAAGCTCTTGTTTCGAAATTTAAGAAGCTGCACGAAGATCTGACGAATGGCTTCTGGGCACTTGACGACGAAAGTCGATGA 1164 43.13 MLSFRLFLVELVPYLEHLVVEKLSLVKLFLSTQILTLLFTLVVGREEMKWQKVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERNGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDQDFISIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEEALVSKFKKLHEDLTNGFWALDDESR 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2842200 2845760 + Bma013267.1 Bma15g00289 96411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00289 387 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 47 386 IPR022878 GO:0046034|GO:0046961
Bma15g00289 387 CDD ATP-synt_V_A-type_alpha_C 239 345 - -
Bma15g00289 387 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 42 222 IPR000194 GO:0005524
Bma15g00289 387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 226 IPR027417 -
Bma15g00289 387 Gene3D - 226 374 IPR024034 -
Bma15g00289 387 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 47 386 - -
Bma15g00289 387 ProSitePatterns ATP synthase alpha and beta subunits signature. 213 222 IPR020003 GO:0005524
Bma15g00289 387 Gene3D - 31 225 IPR027417 -
Bma15g00289 387 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 235 317 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g01011 Bma15g00289 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00060 Bma-Chr15:740166 Bma15g00289 Bma-Chr15:2842200 1.30E-19 dispersed
Bma15g00289 Bma-Chr15:2842200 Bma14g01127 Bma-Chr14:14310993 2.24E-07 dispersed
Bma03g00617 Bma-Chr3:5093699 Bma15g00289 Bma-Chr15:2842200 3.89E-22 transposed
Bma08g00610 Bma-Chr8:38513192 Bma15g00289 Bma-Chr15:2842200 1.69E-23 transposed
Bma15g00289 Bma-Chr15:2842200 Bma09g01011 Bma-Chr9:49562592 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00289 K02145 - cit:102578066 650.588