Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00313 ATGGACTCACCGTCGAAAGCGGCTGAGGAGATTGTCTTGCGCTGGGACTCCACGGCGTCCGAGGAAGCCCGTGACAAGATGATTTTTGAGAGCGATAGGGAGGAGATTGATCGCTACTTAGAGGCCGTGGATGAGATTCAACGCTCTGTGTCGTCTGTTTCCTTATCCGATGACCAATCTAAAGTCAACTCCACCATCCAGATCGTCATGGCTCGCCTCGAGGACGAGCTCCGTAATATCCTCATCACCCACACCAACCCCATCGAGGCTGAATCCCTCACCGATCCGACCCCTTCCACTCCCTCCGCCTCCGTCCACAGTTGCAATTTTAAGGATGAAAATGAAGACGAGGCTGTTATTTCCGTCGAAGATGACCTCAGTTTCAGTGAAAGTCCAAGTTACCGCTCCAGCTGTCGATCCAGCTACCGATCGACAAGTAGTATTCACGAGATCGATCTGATACCTTCCGATGCCGTCTTCGATCTCAGAAGCATCGCTGAGCGAATGATTGCGGCTGGCTACTTGCGAGAGTGTATCCAAGTGTACGCGAACGTGCGAAAGTCTACCTTCGACGCGAGCTTTCGGACGCTCGGCGTCGAAAGATTAAGCATCGGAGATATACAGAAGCTGGACTGGTCCGAGCTGGAGACGAAGATCAGAAGGTGGATAAGGGCCGCAAGAGTTTGTGTTAGGATTCTTTTTGCGAGCGAGAAGAAGCTCTGCGAGCAGATCTTCTATGGTATAGGTACCGCCATTGACGATGCTTGTTTTATGGAGACAGTAAAGGGCCCGGCCTTCCAGCTATTTAATTTTGCAGAGGCGATTAGCATAAGTGGCAGGTCACCTGAAAAGTTGTTTAAGATTTTAGACCTGCATGATGCGTTATTGAATATGATACCTGACATTGAAGAAGTATTCGAATCCAAATCGGCGGAATCAATTAGGGTTCAGGCATCAGAGATTCTGTCTCGGTTGGGGGAGGCAGCCAGGGGCATTATCTCAGAATTCGAGCATGCTGTGCTCAGCGAACCCTCATTGTTGCCGGTGCCAGGCGGGACAATGCACCCTTTGACGAGGTACGTGATGAACTACGTTGGTTTGATTTCTGATTACAAGCGAACCTTAAGTGAGCTTATAGTTTCAAATCCCTCTCCGGGGTCGAGATACTCTGGCGAAGCTGTGAACCCTCCTGATTTGGAGTTTGCAGAAATAGAAGGGAAATCCCCATTAGAGCTCCATTTGATTTGGATGATTGTGCTTCTGCTTTTTAATTTGGAGGGGAAGTCCAGGCACTACAAAGATATTTCGTTGGCACACTTGTTTATCATGAACAATGCTCACTACATTGTTCAGAAAATAAAAAGATCATCCGATCTGAGAGAAATGATAGGGGATGTTTATCTGAAGAAATGGACCGGCAAATATCGACAGGCTGCAACCTGCTACCAGAGAGCAACCTGGGTGAAGGTGTTATTGTGCTTAAGGGACGAGGGGTTGCATGTAAGTGGGAGTTTCTCTTCAGGGGTCTCAAAGAGTGCTTTGAGAGAGAGGTTTAAGACCTTTAATGCTATGTTTGATGAGGTTCATAGGACTCAAGCCAGTTGGTTTATCCCAGATGCTCAGCTCAGAGAGGAGCTACGCATATCTATAGCAGAAAAGTTGATCCCTGCTTATAGAGCATTTCTTGGGCGGTTCAGGCAGTATATCGAGAGCGGAAAGCACCCAGAAAACTACATCAAGTACTCGGAGGAGGATTTGGAGAATGCTGTCTTGGATTTCTTCGAGGGTTGCCCAGTATCCCAGCATTTTAGGAGGAGATCTTGA 1824 48.08 MDSPSKAAEEIVLRWDSTASEEARDKMIFESDREEIDRYLEAVDEIQRSVSSVSLSDDQSKVNSTIQIVMARLEDELRNILITHTNPIEAESLTDPTPSTPSASVHSCNFKDENEDEAVISVEDDLSFSESPSYRSSCRSSYRSTSSIHEIDLIPSDAVFDLRSIAERMIAAGYLRECIQVYANVRKSTFDASFRTLGVERLSIGDIQKLDWSELETKIRRWIRAARVCVRILFASEKKLCEQIFYGIGTAIDDACFMETVKGPAFQLFNFAEAISISGRSPEKLFKILDLHDALLNMIPDIEEVFESKSAESIRVQASEILSRLGEAARGIISEFEHAVLSEPSLLPVPGGTMHPLTRYVMNYVGLISDYKRTLSELIVSNPSPGSRYSGEAVNPPDLEFAEIEGKSPLELHLIWMIVLLLFNLEGKSRHYKDISLAHLFIMNNAHYIVQKIKRSSDLREMIGDVYLKKWTGKYRQAATCYQRATWVKVLLCLRDEGLHVSGSFSSGVSKSALRERFKTFNAMFDEVHRTQASWFIPDAQLREELRISIAEKLIPAYRAFLGRFRQYIESGKHPENYIKYSEEDLENAVLDFFEGCPVSQHFRRRS 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3022118 3023941 + Bma013289.1 Bma15g00313 96435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00313 607 Gene3D Exocyst complex component Exo70 11 604 - -
Bma15g00313 607 SUPERFAMILY Cullin repeat-like 21 595 IPR016159 -
Bma15g00313 607 Coils Coil 607 607 - -
Bma15g00313 607 Pfam Exo70 exocyst complex subunit 221 590 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bma15g00313 607 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 607 - -
Bma15g00313 607 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 607 IPR004140 GO:0000145|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g00990 Bma15g00313 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00137 Bma-Chr11:1219355 Bma15g00313 Bma-Chr15:3022118 7.56E-107 dispersed
Bma12g01079 Bma-Chr12:43094469 Bma15g00313 Bma-Chr15:3022118 5.88E-125 dispersed
Bma01g02005 Bma-Chr1:74410799 Bma15g00313 Bma-Chr15:3022118 4.43E-116 transposed
Bma08g00906 Bma-Chr8:47947222 Bma15g00313 Bma-Chr15:3022118 3.87E-114 transposed
Bma15g00313 Bma-Chr15:3022118 Bma09g00990 Bma-Chr9:49401086 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00313 K07195 - mnt:21391539 898.271