Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00327 ATGAACTTGGGTGCGGAGGAGGAAGAATCGACGCCAGAGATACATATTCCGGCGGACGTCGATTGGGAGATGCTTGACAAATCAAAGTTTTTCTTCCTCGGCGCCGCCTTATTTTCAGGTGTGTCTGCGTCTCTGTACCCTATTGTGGTGTTGAAAACCCGGCAACAAGTGGCTCAATCGCAGCTCTCTTGCATCAGAACGGCGTTCTCCATTGTTCGACACGAGGGAAAAATCCTCAACACAGATGGCCCGAGGGGTCTGTACAGGGGGTTTGGGATCTCAATTCTGACTTACGCCCCCTCAAATGCACTTTGGTGGGCATCATACTCGATGGCGCAGCGGCTGGTTTGGGGCGGAATCGGATGCTATTACTTGAAGAAAGACGAGGATGGTGATGGTAATAAGCCAAATGTTTTTCGGCCCGATTCGAAAACCGTAATGGCTGTTCAGGGACTCAGCGCAGCCATGGCTGCACAGGTTGTGTGGACTCCTGTGGATGTTGTGAGCCAGAGACTAATGGTTCAGAGTGGGTGTATTAGTAGCGGTGGTAGTAAAATTTCTAATGCATCGCCTTGTAGGTATCTTAATGGAATCGATGCATTTAGAAAAATCCTCAACACAGATGGCCCGAGGGGTCTGTACAGGGGGTTTGGGATCTCAATTCTGACTTACGCCCCCTCAAATGCACTTTGGTGGGCATCATACTCGATGGCGCAGCGGCTGGTTTGGGGCGGAATCGGATGCTATTACTTGAAGAAAGACGAGGATGACGAGGATGGTGATGGTAATAAGCCAAATGTTTTTCGGCCCGATTCGAAAACCGTAATGGCTGTTCAGGGACTCAGCGCAGCCATGGCTGGGGGCGTTTCGGCTTTAATAACTATGCCTCTCGACACAATCAAGACAAGATTGCAGGTTTTGGATGGCGAGGAAAACGGAAGACCGAGACCCTCAATCGGACAGACGGTGAGGAATTTGGTGAAGGAAGGCGGCTGGTCGGCCTGTTACAGAGGGTTGGGACCTCGGTGGGCTTCCATGTCAATGTCTGCTACGACCATGATCACTACCTATGAGTTTCTGAAGCGGCTCTCCACCAAAACTCAAGACGGGTTCCCTGGT 1119 51.03 MNLGAEEEESTPEIHIPADVDWEMLDKSKFFFLGAALFSGVSASLYPIVVLKTRQQVAQSQLSCIRTAFSIVRHEGKILNTDGPRGLYRGFGISILTYAPSNALWWASYSMAQRLVWGGIGCYYLKKDEDGDGNKPNVFRPDSKTVMAVQGLSAAMAAQVVWTPVDVVSQRLMVQSGCISSGGSKISNASPCRYLNGIDAFRKILNTDGPRGLYRGFGISILTYAPSNALWWASYSMAQRLVWGGIGCYYLKKDEDDEDGDGNKPNVFRPDSKTVMAVQGLSAAMAGGVSALITMPLDTIKTRLQVLDGEENGRPRPSIGQTVRNLVKEGGWSACYRGLGPRWASMSMSATTMITTYEFLKRLSTKTQDGFPG 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3196727 3198455 - Bma030785 Bma15g00327 96449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00327 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 142 241 IPR018108 -
Bma15g00327 373 SUPERFAMILY Mitochondrial carrier 23 360 IPR023395 -
Bma15g00327 373 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 76 - -
Bma15g00327 373 PANTHER SUBSTRATE CARRIER PROTEIN-RELATED 1 76 - -
Bma15g00327 373 PANTHER SUBSTRATE CARRIER PROTEIN-RELATED 151 370 - -
Bma15g00327 373 PANTHER SUBSTRATE CARRIER PROTEIN-RELATED 77 157 - -
Bma15g00327 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 274 363 IPR018108 -
Bma15g00327 373 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 151 370 - -
Bma15g00327 373 Gene3D Mitochondrial carrier domain 21 245 IPR023395 -
Bma15g00327 373 Gene3D Mitochondrial carrier domain 248 372 IPR023395 -
Bma15g00327 373 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 77 157 - -
Bma15g00327 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 115 IPR018108 -
Bma15g00327 373 Pfam Mitochondrial carrier protein 38 116 IPR018108 -
Bma15g00327 373 Pfam Mitochondrial carrier protein 149 242 IPR018108 -
Bma15g00327 373 Pfam Mitochondrial carrier protein 277 366 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00118 Bma-Chr4:954175 Bma15g00327 Bma-Chr15:3196727 4.11E-144 dispersed
Bma13g00190 Bma-Chr13:2235522 Bma15g00327 Bma-Chr15:3196727 1.62E-19 dispersed
Bma15g00327 Bma-Chr15:3196727 Bma07g00041 Bma-Chr7:1332196 1.74E-17 dispersed
Bma15g00327 Bma-Chr15:3196727 Bma07g01583 Bma-Chr7:51132075 1.61E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00327 K15121 - cpap:110818441 467.618