Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00328 ATGTTTCCTGCAGTTTCCATGACTCTTAGATTAGGTGATTCAAAGTCTGATATCTCTGAAAGCACAAACCATATGGAAATCACATGGCTCAAGCTGGTAACAGACAAAGCAAATTTGCCTGTGAAAAGTGGAAAAGAAATTTTTCAAGGTGGCCGGCCTGAGTTTAATCAGGCGACGGCACCAGAAACAGATCAGGGGATTGTTGATTTGCTAGAGAGCGGAAAGATTTCAACCGCTTCCGGTGGTATGATTGTAGAAAACAAAGACGATCAAACTTTATCCGTGGTGGAGGTCGCAAATGGAGTTATTGGGAAGGATGGAATGTTATCTGACGTTGGATCCGAAATTAAGCTGCCGGGTGTAGCAGAAATTAAGGATGTCAGTATTGATATTGGCCATTTTGTTACCAAAGCTATGATTCTGGTGAAACCAGTACAAGTGCCATCTATGGAGTTTATCGTGGCTTCAGTGAGCTCGGATTCGGATATAGTTCAGAATTCGGAGCTTAAATCCTCCAAAGTCGTTTACGAATTGAACGGAGAGAAGAACGTAGGAAGCCTCATACGTGCTGTGTTTGAGCTGAATTGTCTTCCTCTGTGGGGCTCAGTATCGATCAGTGGAAGACGACCTGAAATGGAAGATGAAATTGCTACTATTCCTAATTTTCTGAACATTCCTGCCAAATTGCTTATCTGCAAGAACACAAGTAAGGGACATAGCCAAAATTTGACCCATTTTCAAAGTCACTTTTATGGCGTTTATGATGGCCACGGTGGATCTCAGGTTGCTAATTACTGTCGTGAGCAACTTCATTTGGCTTTAGCTGACGAGATCGGAGCCATTGAGGACGGTTTAATCGATGCAGACATGGAGGAGAACACGGAGGAGCAATGGAAAGGAATATTCACCAATTGCTTTCTGAAGGTTGACGATCAAATCGGAGGAATCGTCGGGAACGAAGTATCCAAACCAATCGTCCCCGAAACTGTGGGATCCACTGCCGTGGTGGCATTAGTCTGTCCAACGCATATCATAGTGGCAAACTGTGGGGATTCAAGAGCAGTCCTCTGCCGTGGCAAAAAACCAATCCCATTATCCATTGATCACAAACCAAATAGAGAAGATGAGTTCACGAGGATCGAAGAGTTGGGTGGAAAGGTCATCCAATGGAACGGTCATCGTGTTTTTGGAGTTCTCGCGATGTCGAGGGCCATTGGTGATCGATATTTGAAGCCATGGATTATTCCGGACCCAGAAATCACAATGACGCCTCGGACTCGAGAGGACGACTTGCTTATTTTGGCAAGTGATGGGCTATGGGACGTTGTGACAAACGAGGAAGCATATGAAGCTGCTCGAAGGCGGATTATGCTATGGCACAAGAAAAACGAGTCGAACAACATCACGGAAAAAAGAGGGTCAGGGGTCGATCCGGCTGCGCAGGCGGCTGCCGATTACCTAGCAAGCCTTGCACTTCAGAGGGGAAGCAGAGACAACATCTCTGTGATTGTGGTGGACTTGAAAGCCAGAAGAAAGGTCAAGGCCAAAACTTGA 1554 45.62 MFPAVSMTLRLGDSKSDISESTNHMEITWLKLVTDKANLPVKSGKEIFQGGRPEFNQATAPETDQGIVDLLESGKISTASGGMIVENKDDQTLSVVEVANGVIGKDGMLSDVGSEIKLPGVAEIKDVSIDIGHFVTKAMILVKPVQVPSMEFIVASVSSDSDIVQNSELKSSKVVYELNGEKNVGSLIRAVFELNCLPLWGSVSISGRRPEMEDEIATIPNFLNIPAKLLICKNTSKGHSQNLTHFQSHFYGVYDGHGGSQVANYCREQLHLALADEIGAIEDGLIDADMEENTEEQWKGIFTNCFLKVDDQIGGIVGNEVSKPIVPETVGSTAVVALVCPTHIIVANCGDSRAVLCRGKKPIPLSIDHKPNREDEFTRIEELGGKVIQWNGHRVFGVLAMSRAIGDRYLKPWIIPDPEITMTPRTREDDLLILASDGLWDVVTNEEAYEAARRRIMLWHKKNESNNITEKRGSGVDPAAQAAADYLASLALQRGSRDNISVIVVDLKARRKVKAKT 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3199290 3201208 - Bma013306.2 Bma15g00328 96450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00328 517 PANTHER PROTEIN PHOSPHATASE 2C 16 101 517 - -
Bma15g00328 517 ProSitePatterns PPM-type phosphatase domain signature. 250 258 IPR000222 GO:0043169
Bma15g00328 517 SUPERFAMILY PP2C-like 192 508 IPR036457 -
Bma15g00328 517 PANTHER ALPHABET, ISOFORM E-RELATED 101 517 - -
Bma15g00328 517 ProSiteProfiles PPM-type phosphatase domain profile. 199 507 IPR001932 -
Bma15g00328 517 Pfam Protein phosphatase 2C 243 500 IPR001932 -
Bma15g00328 517 CDD PP2Cc 201 507 IPR001932 -
Bma15g00328 517 SMART PP2C_4 189 505 IPR001932 -
Bma15g00328 517 Gene3D - 186 517 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00345 Bma-Chr2:5551512 Bma15g00328 Bma-Chr15:3199290 1.36E-153 dispersed
Bma02g00536 Bma-Chr2:10564858 Bma15g00328 Bma-Chr15:3199290 2.02E-151 dispersed
Bma04g00120 Bma-Chr4:963819 Bma15g00328 Bma-Chr15:3199290 9.44E-44 dispersed
Bma07g00517 Bma-Chr7:6448042 Bma15g00328 Bma-Chr15:3199290 5.02E-88 dispersed
Bma14g00520 Bma-Chr14:5779888 Bma15g00328 Bma-Chr15:3199290 1.49E-74 dispersed
Bma15g00328 Bma-Chr15:3199290 Bma03g00142 Bma-Chr3:1069355 4.07E-76 dispersed
Bma15g00328 Bma-Chr15:3199290 Bma01g00916 Bma-Chr1:8903840 8.91E-166 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00328 K14497 - jre:109011728 564.688