Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00335 ATGTTGAAAGAATCAAGGTTGATTGACGGCTTGTTTCCGCTTTTATCGGAAGGTGGAAAGCCGAACTCAGAACTCAAACTTCGATTCATGTTATGGTTTAGGCCAGCAGAACATGATGTGAGCTGGAAGAAGATACTTGGCAATGGAGATTTCAAGGGCCTAAGAAATGCAACCTTTCCGCAAAGGTCAAACTGTCAGGTTGTCTTATATCAAGATGCTCATCACCTTTCTACATTTCAGCCTCCATTTCGGCAGTCCGGAGCTCCTAGAAGGCTTTGGGAAGATGTATACAAGGCCATTGACAATGCAAAAATTTTGATTTACATAGCAGGCTGGTCATTCAATCCCAATACAGTCTTGGTAAATCAACAAACTGTAACTCAAATTCTTCATTCTAACTTCTTAAGAAAGCTAATTACATTCTTTTCACAGGTTAGAGACTCTGATCATACTAATATTCCGTATGCAGTGGGAGTTACGCTTGGTGACTTGTTGAAGCTGAAAGCTGAGGAAGGAGTCGCCGTCAAAATCATGATTTGGGATGACGAAACGTCACTTCCATTCATCAAAAACGAAGGAATAATGAGAACTCATGAGCAAGATGCATTAACCTATTTCAAGAACACGAAAGTTGTCTGCAGATTGTGTCCAAAATTGCACCCTTTGTCTCTCCCACTCTTCTCTCACCACCAGAAGACAATTATTCTTGATACTCAATCTCACATTGAACCAAACCGCAGAGAAATTATGAGTTTTCTTGGCGGTTTGGATCTTTGTGATGGACGTTATGATACCGAGCAACACTCACTGTTCCACACTCTAAAAAAGCAATCCCATAATTTAGACTTCTATCAAACAAGCATAGCAGATGCCAAGATCAGCCATGGAGGGCCAAGGGAGCCTTGGCATGATGCTCATGCTTGTGTCACAGGCGAAGCTGCCTGTGATATCTTAACAAATTTTGAGCAGAGGTGGGCTAAGCAATGTGATGCATCTTCTCTAGTCCCCACTGCCACCCTTATGAATCTCACACTCAAACCAGAAATAAGTAGAAACAACTCTTCACAGAGGAATTGGAAAGCACAAGTTTTCAGATCAATCGATCATTTGTCTGTTACACAATTGTCAAAAACATCAACTGTAGAGAAAAGCATCCATGATGCTTACGTGGAAGCAATACGACGGGCAGAGATGTTCATATATATTGAAAACCAGTACTTCATTGGAGGGTGCCATATGTGGGAGAGAGATTTGCATTGTGGGTGCAGTAATTTGATACCTGTCGAGATAGCACTAAAGATTGTCAGCAAGATCAAGGCAAGAGAAAGATTCTCAGTCTACATAGTAATACCAATGTGGCCAGAGGGAGTGCCTGAGAGTGAAACAGTTCAGGACATTTTGCATTGGAGTAGAGAAACAATGGCAATGATGTATAGGTTGATCGGCGAAGCAATGCGAGAGTATGGCGATACTGGTCACCCGAGAGACTACCTGAACTTCTTCTGTCTTGCAAACAGGGAGGAGGGAGCCAATGAAGAGTTCGTTCCTCCATATTCTCCTCAACCGGCAACTCAATATTTCAATGCGCAAATCAATAGAAGGTTCATGATTTATGTCCACTCCAAACTCATGATAGTGGACGACCTGTACATTATAATAGGATCTGCAAATGTGAACCAGCGATCAATGGACGGGCAGAGAGACACAGAGATCGCCATCGGATGCTACCAAACAGAAAATGGCGGAGATACAAAGAGCCTTGGAGAAATTTTTTCATACAGGCTGTCTCTTTGGTATGAACATACTGGAGGTCTAGCCGAGGAGATTTTCCAAGAGCCACATAGTTTGGAATGTGTACAGAAAATGCGTAACATAGGAGACCAGATGTGGAAAATATACAGCGGAGAAGAGATTATCGACATGAAAGGCGTTCATCTTGTCACATACCCAATAATTGTCAAACAGGATGGTTCTCTTGAAGATCGAGCTGATTGTGGAGGTCTATTTCCAGATACAAAGTGCCAGGTAAAGGGCAAAAGATCGACATTAATGCCAACCATCTTTACCACATAG 2073 42.26 MLKESRLIDGLFPLLSEGGKPNSELKLRFMLWFRPAEHDVSWKKILGNGDFKGLRNATFPQRSNCQVVLYQDAHHLSTFQPPFRQSGAPRRLWEDVYKAIDNAKILIYIAGWSFNPNTVLVNQQTVTQILHSNFLRKLITFFSQVRDSDHTNIPYAVGVTLGDLLKLKAEEGVAVKIMIWDDETSLPFIKNEGIMRTHEQDALTYFKNTKVVCRLCPKLHPLSLPLFSHHQKTIILDTQSHIEPNRREIMSFLGGLDLCDGRYDTEQHSLFHTLKKQSHNLDFYQTSIADAKISHGGPREPWHDAHACVTGEAACDILTNFEQRWAKQCDASSLVPTATLMNLTLKPEISRNNSSQRNWKAQVFRSIDHLSVTQLSKTSTVEKSIHDAYVEAIRRAEMFIYIENQYFIGGCHMWERDLHCGCSNLIPVEIALKIVSKIKARERFSVYIVIPMWPEGVPESETVQDILHWSRETMAMMYRLIGEAMREYGDTGHPRDYLNFFCLANREEGANEEFVPPYSPQPATQYFNAQINRRFMIYVHSKLMIVDDLYIIIGSANVNQRSMDGQRDTEIAIGCYQTENGGDTKSLGEIFSYRLSLWYEHTGGLAEEIFQEPHSLECVQKMRNIGDQMWKIYSGEEIIDMKGVHLVTYPIIVKQDGSLEDRADCGGLFPDTKCQVKGKRSTLMPTIFTT 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3307069 3309249 - Bma013315.1 Bma15g00335 96457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00335 690 Gene3D Endonuclease Chain A 374 584 - -
Bma15g00335 690 SUPERFAMILY Phospholipase D/nuclease 53 331 - -
Bma15g00335 690 SMART pld_4 535 562 IPR001736 GO:0003824
Bma15g00335 690 SMART pld_4 225 262 IPR001736 GO:0003824
Bma15g00335 690 Pfam Phospholipase D Active site motif 227 262 IPR001736 GO:0003824
Bma15g00335 690 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 535 562 IPR001736 GO:0003824
Bma15g00335 690 PANTHER PHOSPHOLIPASE D ALPHA 4 1 690 - -
Bma15g00335 690 Pfam PLD-like domain 455 573 IPR025202 -
Bma15g00335 690 PANTHER PHOSPHOLIPASE D 1 690 IPR015679 -
Bma15g00335 690 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 225 262 IPR001736 GO:0003824
Bma15g00335 690 SUPERFAMILY Phospholipase D/nuclease 361 608 - -
Bma15g00335 690 Pfam Phospholipase D C terminal 607 679 IPR024632 -
Bma15g00335 690 Gene3D Endonuclease Chain A 71 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00903 Bma-Chr9:48415787 Bma15g00335 Bma-Chr15:3307069 0 dispersed
Bma12g00109 Bma-Chr12:1720156 Bma15g00335 Bma-Chr15:3307069 6.58E-157 dispersed
Bma14g01317 Bma-Chr14:24301806 Bma15g00335 Bma-Chr15:3307069 3.25E-15 dispersed
Bma15g00335 Bma-Chr15:3307069 Bma10g00806 Bma-Chr10:13224797 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00335 K01115 - csv:101206396 998.038