Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00346 ATGAAGGAGGGTTCGGAGTTGTTTACCATGGCTTCGCCGGTGATATTCCGGTGGCAGTGTGAAGATTCTCTCTACAATGTCCGCAAGAGGGTCAATCTTTTGATGAGAGTTCACCATAGGAACCTGACGAATCTTGTCGGGTACTTTAACGAAGGAACCAACGTTGGACTAATTTACGAGTACATGGTTAACGGTGACTTAGCCGAACATCTCTCAGAGAATTCAGTAAATTTCCTCAGTTGGGAAGACAGACTCCGAATCGCCATGGATGCAGCTCTAGGGTTGGAGTATTTGCACGATGGGTGTAAGCCGCCAATCATTCACAGAGATGTGAAAACGACGAACATATTGTTGGATGACAAATTTCAAGCAAAACTCTCAGATTTCTGTCTTTCAAGGGATATTCCCCTTGATGGGAGCACTCATGTCGCCACCACAACCTTTGCAGGAACTCCTGGCTACCTCGACCCCGAATATTACCAATCAAACCGTTTGACGGAAAAGAGCGACATCTACAGCTTCGGAGTGGTTCTTGTTAATGCAACGACTTGCATGTATTGGCATTCAATGTTTTTTGGCAATATATTTTTATTTAAGGAGATAATATGTTTTTCCAAAATCGATGATTTTATTCTTGGTAAGCAAGCAAAAGCCGATTCTGTTTATTGGATGGCGTCTGGTCAACATTAA 690 43.04 MKEGSELFTMASPVIFRWQCEDSLYNVRKRVNLLMRVHHRNLTNLVGYFNEGTNVGLIYEYMVNGDLAEHLSENSVNFLSWEDRLRIAMDAALGLEYLHDGCKPPIIHRDVKTTNILLDDKFQAKLSDFCLSRDIPLDGSTHVATTTFAGTPGYLDPEYYQSNRLTEKSDIYSFGVVLVNATTCMYWHSMFFGNIFLFKEIICFSKIDDFILGKQAKADSVYWMASGQH 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3440211 3441277 - Bma013326.1 Bma15g00346 96468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00346 229 SUPERFAMILY Protein kinase-like (PK-like) 23 190 IPR011009 -
Bma15g00346 229 ProSiteProfiles Protein kinase domain profile. 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00346 229 PANTHER PUTATIVE-RELATED 29 184 - -
Bma15g00346 229 Pfam Protein tyrosine and serine/threonine kinase 26 180 IPR001245 GO:0004672|GO:0006468
Bma15g00346 229 PANTHER OS07G0107800 PROTEIN-RELATED 29 184 - -
Bma15g00346 229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Bma15g00346 229 Gene3D Transferase(Phosphotransferase) domain 1 15 198 - -
Bma15g00346 229 SMART serkin_6 18 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00346 Bma-Chr15:3440211 Bma06g00842 Bma-Chr6:42734910 1.56E-56 dispersed
Bma10g00757 Bma-Chr10:12090492 Bma15g00346 Bma-Chr15:3440211 1.43E-54 wgd
Bma13g01242 Bma-Chr13:45752494 Bma15g00346 Bma-Chr15:3440211 1.04E-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66940 PF07714 PK_Tyr_Ser-Thr 3.00E-32 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00346 - - csv:101206211 241.506