Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00354 ATGCAGAGAGAAGCAGAGGAAAGAAGCGTCAAGACTTCAAGCTGTCAATCGAAGCTTACGGCAATGAATAAGCTCTTAATGGAGGAGAATGATCGGTTGCAGAAGCAGGTTTCGCAGCTGGTATATGAAAACGGCTACTTCCGTCAGCACACCCAGAGTGCGACGCTTGCTAACAAAGACACTGGTGAAGCTGTGATGACTGGCGGTCAGCACAATTTGACAACTCAGCATCCGCCAAGAGATGCTAGTCCTGCAGGGCTGTTGTCCATTGCAGAAGAAACTTTAACAGAGTTTCTTTCAAAGGCCACTGGAACTGCTGTAGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGTGCTGGAGTGGCAGCACGAGCCTGCGGTCTGGTCGGCCTGGAGCCTACTAGGGTTGCAGAAATCCTTAAGGATCGTCCATCTTGGTTTCGCGATTGTCGAGCTGTGGATGTACTTAATGTGCTGCCGACTGCAAATGGTGGAACCATTGAGTTGCTTTATTTGCAGATGTATGCCCCAACAACATTGGCACCAGCTCGTGATTTCTGGTTGCTTCGCTACACTTCTGTTTTAGAAGATGGCAGCCTTGTGATCTGTGAAAGATCACTTAAGAACACTCAGAATGGTCCAACTATGCCTTCAGTGCAGCATTTTGTCAGAGCGGAGATGCTCCCAAGTGGGTATCTGATTCGACCATGTGAAGGAGGCGGCTCAATTATACACATTGTGGATCATATAGATTTGGAGCCTTGGAGTGTACCAGAAGTGTTGAGACCATTGTATGAATCATCTACTATTCTTGCCCAAAAGACAACAATGGCGGCTCTGCGCCAGTTGAGGCAGATTGCCCATGAGGTTTCCCAGTCTAATGTAACAGGCTGGGGTAGACGACCCGCAGCTCTTCGCGCTCTTAGTCAGAGATTGACAAGGGGTTTTAATGAGGCACTTAATGGGTTTACTGATGAGGGATGGTCAGTGATCGGAAGTGATGGCATGGATGATGTTACTATCCTTGTGAACTCATCTCCTGATAAACTAATGGGTTTGAATCTTTCATTTGGAAATGGATTTTCTGCTGTGAGCAATGCTGTCTTATGTGCCAAAGCATCCATGTTATTGCAGAATGTACCTCCTGCAATCCTTCTTCGGTTTTTACGGGAGCACCGGTCAGAATGGGCAGACATCAATATGGATGCTTATTCGGCTGCAGCTATCAAGGTTGGTCCATGTAGTTTACCAGGGACTCGAGTTGGAAGTTTTGGAAGTCAAGTTATACTTCCATTGGCTCACACTATTGAACATGAAGAGTGCATGGAAGTCATTAAGCTTGAAGGTGTTGGCATTCTCCTGAAGAGGCGATGTTGCCCAGAGAAATGTTTCTCTTGCAACTGTGCAGTGGGATGGATGAAAGTGCTGTTGGCACGTGTGCAGAACTAA 1488 47.04 MQREAEERSVKTSSCQSKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQSATLANKDTGEAVMTGGQHNLTTQHPPRDASPAGLLSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCAGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYLQMYAPTTLAPARDFWLLRYTSVLEDGSLVICERSLKNTQNGPTMPSVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDLEPWSVPEVLRPLYESSTILAQKTTMAALRQLRQIAHEVSQSNVTGWGRRPAALRALSQRLTRGFNEALNGFTDEGWSVIGSDGMDDVTILVNSSPDKLMGLNLSFGNGFSAVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADINMDAYSAAAIKVGPCSLPGTRVGSFGSQVILPLAHTIEHEECMEVIKLEGVGILLKRRCCPEKCFSCNCAVGWMKVLLARVQN 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3785218 3789152 - Bma013333.1 Bma15g00354 96476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00354 495 PANTHER CLASS III HD-ZIP PROTEIN CNA1 11 475 - -
Bma15g00354 495 SUPERFAMILY Bet v1-like 89 300 - -
Bma15g00354 495 MobiDBLite consensus disorder prediction 65 84 - -
Bma15g00354 495 Coils Coil 16 43 - -
Bma15g00354 495 MobiDBLite consensus disorder prediction 65 79 - -
Bma15g00354 495 Gene3D - 125 308 IPR023393 -
Bma15g00354 495 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 11 475 IPR044830 GO:0003700
Bma15g00354 495 CDD START_ArGLABRA2_like 84 300 - -
Bma15g00354 495 SMART START_1 89 299 IPR002913 GO:0008289
Bma15g00354 495 Pfam START domain 90 298 IPR002913 GO:0008289
Bma15g00354 495 ProSiteProfiles START domain profile. 80 295 IPR002913 GO:0008289
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00774 Bma15g00354 CCT
Bma10g00774 Bma15g00354 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00456 Bma-Chr14:5244387 Bma15g00354 Bma-Chr15:3785218 3.51E-172 dispersed
Bma15g00354 Bma-Chr15:3785218 Bma12g00798 Bma-Chr12:37356095 5.53E-13 dispersed
Bma10g00774 Bma-Chr10:12466019 Bma15g00354 Bma-Chr15:3785218 2.97E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00354 K09338 - zju:107428556 838.18