Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00371 ATGGGAATCAGAACAAGAAATCTCTTTCTTCTCATCATTGGGTGTTTCATGTTATGCCATAGCCGTTGTTCTTCCATACGAACCTTGTTGAGGCAAGGCGAATCTCTGCAAAATTCTGACCAACTTCTTTCGAAATCTCGAAAATTTCTGCTCTGTTTTTTCGACCCAATTGATGATTACTCTCAAAAACAAAACGTTTTCCTTGGATTATTTTACCATAAAAAGACATTCTCATCTTCCGACCCACTGTGGGTGGCAGACATAAACGCCAAATATCTCGACGGTTCTGCAAATCTTACGCTAGATAATGATGGAAGCTTGAAGCTTTTATATGAAAGAGGGCGTTCTTTTGTGTTATACTCATCTCAAGCGCCGAGTAATTCCAACGTCGTTCTTCAGGATGATGGAAACTTGGTACTGCGTGAATTCAATTCAGACGGGTCTTTAAGGCAAGACTTGTGGCAAAGCTTTGATCATCCCACAGACACGCTTTTACCAGGAATGAAACTGGGTTTTAACAACAGAACTGGAAAAAACTTGACTCTTGTATCGCAGAGGCTTCAAGGATATGATTATAAATCACCATCTTATACTTTTGGCGTAGACCCAGCAAAGATAAACCAATTGGTTATTCGGTGGGTGGGAGACTTATACTGGGCTAGTGGACCTTGGAAAAATGAGAATTTCACCACGGCAACTGCCTTGTCTAGGAATGAAAACTTGAAGTTCGACTACGTTTCAAATGAGAATGGAACGTATTTCACCTTTTCTGCCTTCGAAGACATTTTTAATCCGCGGTTGAAACTGGACATTCATGGTAGCCTCGCACTCATCACGAGTGATTCCACAGACATTCTTGTTGATTGCAATTATTATTATTATTATACTGAAAATGAGGGATGCGTGGAGAAGCTTCAAAAGTGCATAGAAAGAGAACTTAATAATTATGGGTATGACAATTTTACGGGGATCATGTCCAGTAGTGGCACGAAGATGAGTAAGAACTTAACTTTTGATGACTGCTTGAGCAAATGCTATAACAATTGTTCTTGTGTTGCCTTCGCTTCTGCAAACGACACAGAATGTGTGATTTGGAGCCAATGGAGTCCTTTTCGGGAGGCCTCTGTCGTAGATGGAGGCTACCTCATTCATAAACTTAAATCCCCAAATATAAAATGGTTGGCCTTGTATCTGATGCGGTTAGTGCTGCTTGTATTAGTATTGCCTATTATGATAAGTTCGTGCGGCTGCTGGGTGGTGGTAAAAAGATACAAAAGAAAAGCGGAGAAAAGGAGACTAAAAATGTTACTACAAGAGATCGGGGTTGATGCTCTGCACTTCTCCACCAAACCCAAGAAAGAAAAGAAGACGCAACAAAAGCTGCGCATATTCAGTTTCCGAACCATTGTTTATGCCACAAAAAATTTCTCTGATGAAAACCAGTTGGGAAAAGGAGGGTATGGGCCAGTTTATAAGGGAAGGTTACCAGATGGGCAAGAAATTGCCATAAAAAGACTTTCGAGCAGTTCAGGACAAGGATTTGTGGAGTTCAAGAATGAAGCCTTACTCGTCTCTCAGCTCCAACACACTAATCTGGTAAGACTTTTAGGATTCTGCGTTCAAGGACGAGAGAGAGCCTTGGTGTACGAGTACATGCCCAATAAAAGCTTAGATTTCTTCCTCTTCGATCCCACCAGAAAACAGATGCTTAATTGGGAGAAACGCTTCATAATCATCGAGGGCATTGCACAAGGACTGGTTTACCTCCATAAGTATTCGAGATTGAAAATTATTCACAGAGATTTGAAAGCCAGCAACGTACTACTCGATTTAGAAATGAATCCCAAAATATCAGATTTTGGAATGGCCAGACTGCTGGGTCATGGAGACTCAGTAGAAAATACAAACAGAATTGTTGGCACATTTGGGTACATGCCTCCAGAATACGCTCTGCAGGGAACCGTGTCCATAAAAACTGACGTGTTTAGTTTTGGAATTCTGTTACTCGAGATTGTGAGCGGGAGGAAGAATAACAGTCGCTACCATTCAGACCACCCCCTAAATCTTACAGGATATGCTTGGACTTTGTGGAAGGAGGGCAAAGGGGTGGAGCTGATCGACCCTTCACTGGAAGAATCAGTTCCTCGTGACGAAGTTACGAAATGCATACAAGTCGGTCTGCTCTGTGTTCAAGATCAGGCGAGCAGCAGACCCACCATGGTAGACGTTGTTTTTATGCTCTCAACTGAAAGCGCCCAACTTCCATTACCGAGAAAGCCTGCGTTCTTCATTAGTAGCATTGCCGAAACGCCAGAGGAAGCCGAGACGCGAGTTGAAATCTTTTCAATAAATGAAATGACCATGTCAAATATGGAGGTAAGGTGA 2385 42.1 MGIRTRNLFLLIIGCFMLCHSRCSSIRTLLRQGESLQNSDQLLSKSRKFLLCFFDPIDDYSQKQNVFLGLFYHKKTFSSSDPLWVADINAKYLDGSANLTLDNDGSLKLLYERGRSFVLYSSQAPSNSNVVLQDDGNLVLREFNSDGSLRQDLWQSFDHPTDTLLPGMKLGFNNRTGKNLTLVSQRLQGYDYKSPSYTFGVDPAKINQLVIRWVGDLYWASGPWKNENFTTATALSRNENLKFDYVSNENGTYFTFSAFEDIFNPRLKLDIHGSLALITSDSTDILVDCNYYYYYTENEGCVEKLQKCIERELNNYGYDNFTGIMSSSGTKMSKNLTFDDCLSKCYNNCSCVAFASANDTECVIWSQWSPFREASVVDGGYLIHKLKSPNIKWLALYLMRLVLLVLVLPIMISSCGCWVVVKRYKRKAEKRRLKMLLQEIGVDALHFSTKPKKEKKTQQKLRIFSFRTIVYATKNFSDENQLGKGGYGPVYKGRLPDGQEIAIKRLSSSSGQGFVEFKNEALLVSQLQHTNLVRLLGFCVQGRERALVYEYMPNKSLDFFLFDPTRKQMLNWEKRFIIIEGIAQGLVYLHKYSRLKIIHRDLKASNVLLDLEMNPKISDFGMARLLGHGDSVENTNRIVGTFGYMPPEYALQGTVSIKTDVFSFGILLLEIVSGRKNNSRYHSDHPLNLTGYAWTLWKEGKGVELIDPSLEESVPRDEVTKCIQVGLLCVQDQASSRPTMVDVVFMLSTESAQLPLPRKPAFFISSIAETPEEAETRVEIFSINEMTMSNMEVR 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3920919 3924181 - Bma013343.7 Bma15g00371 96493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00371 794 Gene3D Phosphorylase Kinase; domain 1 438 551 - -
Bma15g00371 794 CDD STKc_IRAK 482 747 - -
Bma15g00371 794 ProSiteProfiles PAN/Apple domain profile. 308 388 IPR003609 -
Bma15g00371 794 PIRSF SRK 2 293 IPR024171 GO:0004674
Bma15g00371 794 PIRSF SRK 293 794 IPR024171 GO:0004674
Bma15g00371 794 Pfam D-mannose binding lectin 83 186 IPR001480 -
Bma15g00371 794 Pfam PAN-like domain 330 367 IPR003609 -
Bma15g00371 794 SMART ntp_6 313 387 IPR003609 -
Bma15g00371 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 183 IPR036426 -
Bma15g00371 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Bma15g00371 794 CDD B_lectin 29 160 IPR001480 -
Bma15g00371 794 ProSiteProfiles Bulb-type lectin domain profile. 27 153 IPR001480 -
Bma15g00371 794 Gene3D Transferase(Phosphotransferase) domain 1 552 755 - -
Bma15g00371 794 ProSiteProfiles Protein kinase domain profile. 476 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00371 794 SUPERFAMILY Protein kinase-like (PK-like) 459 774 IPR011009 -
Bma15g00371 794 SMART blect_4 33 160 IPR001480 -
Bma15g00371 794 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 80 788 - -
Bma15g00371 794 Pfam Protein tyrosine and serine/threonine kinase 479 744 IPR001245 GO:0004672|GO:0006468
Bma15g00371 794 SMART serkin_6 476 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00371 794 Gene3D - 22 157 IPR036426 -
Bma15g00371 794 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 80 788 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g01034 Bma-Chr14:12137319 Bma15g00371 Bma-Chr15:3920919 1.93E-132 dispersed
Bma15g00371 Bma-Chr15:3920919 Bma15g00789 Bma-Chr15:16806892 0 dispersed
Bma15g00371 Bma-Chr15:3920919 Bma15g00372 Bma-Chr15:3971300 2.35E-19 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66943 PF07714 PK_Tyr_Ser-Thr 4.80E-43 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00371 - - fve:101309951 704.516