Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00387 ATGGCGGACGTGTTGCTGATGGAATCTGAACTTGCTAAGGAGAAAACAAATGGATACAAACTGGACAGAGCACACATATTTGCTGTTAGCATGTTTGATGATTTTGATAAATTCATGAAGGTTCTTGATGAGTGGGCTGCACCTGAAAGCATTCCATACTTTCCGGGGGAAAATCTTCAAAGTTGGCTTACAGATGAGAAAGCTCGCAATCAGTTTGTGATTCGTGCTGGTAATGATACCGAGATTTTATGGAATGATGCCAGACATATGAAGCCTGATCTTGTGTACAAGCATACAGTTAAACTTATTGATTTCTCACCTGGTGAGAAATATTTAGTAACTTACAGTTGTCATGAACCAAGCAATCCTCGAGACGTAAATAGGATTGTGATCAACATATTTGACATTAAAACTGGTAACGTAATGCGAGATTTCAAGGGAAGCCTGGATGAATTTGCTGTTGGAGGAACAGGAGCTGTTGCAGGAGTGTCTTGGCCAGTTTTTAGATGGGGTGGAAAGAGTGATAAATATTTTTCCAGGATTGGAAAAAACTTAATCTCTGTATATGAAACAGAAACATTTTCTCTGGTTGACAAGAGGTCTTTGAAGGTGGACAATGTTGTGGATTTTAGTTGGTCTCCTACAGACCCAATTCTTGCACTTTTTGTTCCTGAGCTAGGTGGCGGTAACCAACCTGCTAGGGTTAGTCTTGTCCAAATTCCGAGCAAAGAAGAAATTAGACAGAAAAATATTTTCAGTGCTAGTGATTGCAAAATGTATTGGCAAAGCAATGGGGATTATCTTGCTGTTAAGGTTGATCGTTATACAAAGACAAAAAAGAGCACATACAGTGGCTTTGAGCTTTTCCGCATCAAAGAACGTAATATTCCAATTGAGGTTTTGGAACTTGAAAACAAGAATGATAAAATTATTGCTTTTGCTTGGGAGCCCAAGGGCCATAAATATGCCATTATTCATGGTGATAACCCCCGGCCAGATATAAGTTTCTATTCAATGCGAACAGGACACAATACTGGTCGAGTTTCGAAGCTCACCACCCTCAAAGGGAAACAAGCAAATGCTCTTTTCTGGTCGCCAGCTGGCCGTTTTATTATTCTTGCTGGATTGAAGGGTTTCAATGGACAGCTTGAATTTTACAATGTTGATGAGCTTGAAACCATGCTTACAGCTGAGCATTTCATGGCAACAGACATTGAATGGGATCCTACTGGAAGGTATGTTGCAACTTCTGTGCATGAGATGAAAAATGGTTTCTACATATGGTCTTTTAAGGGAAAGCTACTGTATAGAATATTGAAGGATCATTTCTATCAGTTCTTGTGGCGGCCAAGGCCACCTTCATTGTTATCGCCTGAGAAAGAAGAGGAGATATCTAAAAACTTGAAAAAGTACAGTAAGAAGTACGAAGCAGAAGATCAAGACGGGTCAATGCTATTGAGTAAACAAGATCGAGAGAAACGAAAGATGTTGAAGGACGAATGGGATAAATGGTTGAGTGAGTGGAAGAGGATGCATGAAGAAGAAAAACTGTGGAGGCAGAAACTAAGAGATGGCGAAGCCAGTGATGAAGAAGAGGAATATGAAGCCAAAGAGGTTGAAGTTGAGGAGCTTCTCGATTACTTTGTCGCCTTTTACTGTCAATTGTACTTCAAAGCGGCATCTATGAAGTTCCAGGTAAGCGAGGCGTCTGGAAGTTGA 1719 40.37 MADVLLMESELAKEKTNGYKLDRAHIFAVSMFDDFDKFMKVLDEWAAPESIPYFPGENLQSWLTDEKARNQFVIRAGNDTEILWNDARHMKPDLVYKHTVKLIDFSPGEKYLVTYSCHEPSNPRDVNRIVINIFDIKTGNVMRDFKGSLDEFAVGGTGAVAGVSWPVFRWGGKSDKYFSRIGKNLISVYETETFSLVDKRSLKVDNVVDFSWSPTDPILALFVPELGGGNQPARVSLVQIPSKEEIRQKNIFSASDCKMYWQSNGDYLAVKVDRYTKTKKSTYSGFELFRIKERNIPIEVLELENKNDKIIAFAWEPKGHKYAIIHGDNPRPDISFYSMRTGHNTGRVSKLTTLKGKQANALFWSPAGRFIILAGLKGFNGQLEFYNVDELETMLTAEHFMATDIEWDPTGRYVATSVHEMKNGFYIWSFKGKLLYRILKDHFYQFLWRPRPPSLLSPEKEEEISKNLKKYSKKYEAEDQDGSMLLSKQDREKRKMLKDEWDKWLSEWKRMHEEEKLWRQKLRDGEASDEEEEYEAKEVEVEELLDYFVAFYCQLYFKAASMKFQVSEASGS 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4303546 4307562 - Bma013358.1 Bma15g00387 96509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00387 572 PANTHER BNACNNG51870D PROTEIN 8 98 - -
Bma15g00387 572 PANTHER BNACNNG51870D PROTEIN 97 546 - -
Bma15g00387 572 Gene3D - 297 509 IPR011042 -
Bma15g00387 572 Pfam Eukaryotic translation initiation factor eIF2A 249 446 IPR013979 -
Bma15g00387 572 Gene3D - 9 235 IPR015943 GO:0005515
Bma15g00387 572 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 13 546 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bma15g00387 572 SUPERFAMILY DPP6 N-terminal domain-like 72 440 - -
Bma15g00387 572 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 97 546 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bma15g00387 572 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 8 98 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bma15g00387 572 Coils Coil 527 547 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01260 Bma-Chr1:16779422 Bma15g00387 Bma-Chr15:4303546 0 dispersed
Bma02g01255 Bma-Chr2:54599625 Bma15g00387 Bma-Chr15:4303546 2.17E-16 dispersed
Bma10g00862 Bma-Chr10:15817581 Bma15g00387 Bma-Chr15:4303546 7.50E-124 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00387 K03253 - tcc:18607073 930.243