Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00411 ATGGCTCATATTTTGCTTCACGGTACGCTTCATGTCACCATCTACGAAGTCGATCATCTGAAAACTGGCGGTGGACACAATGTCTTCAGCAAACTTATGGCGAATGTTGAAGAGACTGTTGGGTTTGGCAAAGGAGTTACAAAGCTGTATGCCACTATCGATCTGGAGAAGGCTAGAGTGGGGAGGACTCGAATATTAGAAAACGATTACTCAAATCCCAAGTGGTACGAGTCTTTTCACATCTACTGTGCGCACATGGCTGCCGATGTTATTTTCACCGTCAAGGACGATAATCCGATCGGGGCAAGTCTGATCGGAAGACCAGTCAGGGGAAACTCTAAGATTCATATTAAGCTTCAATATTTCGATGTCACAAAGGATCGTTGTTGGAGTCGAGGAATTCGGAGCGCGAAATTTCCCGGAGTTCCTTATACGTTCTACTCGCAGAGACAAGGGTGTAAGGTCTCTTTGTACCAAGATGCACATATCCCCAATGGTTTCATCCCGAAAATCCCGCTCGCCGGAGGGAAGTTCTTCGAGCCTCACCGGTGTTGGGAAGATGTTTTCGATGCTATAACCAATGCGAAGCACCTGATTTACATAACGGGTTGGTCTGTTTACACTGAAATTTCGCTTATAAGGGACTCGAGGAGGCCTAAAGCCGGTGGGGATATCCTACTCGGTGAGCTGCTTAAGAAAAAAGCAAGTGAAGGTGTTAGAGTTCTTATGCTTGTCTGGGATGATAGAACATCTGTTGGTGTGGAAACCCTCGAGCATGACTTGCCCGGTCACTTGCTTCGCTATCCGGTTGGAATTGCGAGCGAAGGTGCAGTCACGGAGCTGCCCGGGTTCGAGCATTTTCCGGACACAAAAGCTCGTGTGCTCGGAACCAAATCTGACTACCTCCCTCCCATTCTGACCACTTACAGTGGCTGTTTTGGAAAGCCAAAACTGAAAACTACGCTGGATGAATCATCTAAAAAAATATCGATTCAAAGCCGGAGAGTAAAGAAATCTTGCAAATCGGAGGATTTTTGGACAACAAGCACATGTGATATGGACAACAGTGCTGGTCAGTCACAGGCAAGCATGTCTTCAATCAGCACAGCCAACCATATGCTTGATCCTCATGGTGCCTCCTCCATTTCCAACGCCCCTTTTGAATACGTAAATCATGGAAATTGTTCTATGTCGGTTTGGGTTGTAGGTCTTCTTCTCTGGAACCAAACCCGGTTACGATGGCTGGGAAATAAAAGTAAAGTAATCTCCGAGAATCGAGCACAGCTAATTCGCGAACCCAAATTGAACTGGAATGCGACGTATGAAAGTTTACTAGGAACGAATAAACCTCTCCCTCAGCCGGTTCCGCTGAGCGAAATGGTAGATTTTCTGGTGGATGTATGGGAGCAAGAGGGAATGTATGATTGA 1428 46.43 MAHILLHGTLHVTIYEVDHLKTGGGHNVFSKLMANVEETVGFGKGVTKLYATIDLEKARVGRTRILENDYSNPKWYESFHIYCAHMAADVIFTVKDDNPIGASLIGRPVRGNSKIHIKLQYFDVTKDRCWSRGIRSAKFPGVPYTFYSQRQGCKVSLYQDAHIPNGFIPKIPLAGGKFFEPHRCWEDVFDAITNAKHLIYITGWSVYTEISLIRDSRRPKAGGDILLGELLKKKASEGVRVLMLVWDDRTSVGVETLEHDLPGHLLRYPVGIASEGAVTELPGFEHFPDTKARVLGTKSDYLPPILTTYSGCFGKPKLKTTLDESSKKISIQSRRVKKSCKSEDFWTTSTCDMDNSAGQSQASMSSISTANHMLDPHGASSISNAPFEYVNHGNCSMSVWVVGLLLWNQTRLRWLGNKSKVISENRAQLIREPKLNWNATYESLLGTNKPLPQPVPLSEMVDFLVDVWEQEGMYD 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4461030 4467219 + Bma013385.2 Bma15g00411 96533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00411 475 Pfam Protein of unknown function (DUF4050) 434 475 IPR025124 -
Bma15g00411 475 Pfam Protein of unknown function (DUF4050) 349 426 IPR025124 -
Bma15g00411 475 PANTHER PHOSPHOLIPASE D 108 254 - -
Bma15g00411 475 PANTHER PHOSPHOLIPASE D 2 107 - -
Bma15g00411 475 PANTHER PHOSPHOLIPASE D 255 308 - -
Bma15g00411 475 PANTHER PHOSPHOLIPASE D 108 254 IPR015679 -
Bma15g00411 475 PANTHER PHOSPHOLIPASE D 2 107 IPR015679 -
Bma15g00411 475 PANTHER PHOSPHOLIPASE D 255 308 IPR015679 -
Bma15g00411 475 Pfam C2 domain 8 107 IPR000008 -
Bma15g00411 475 SUPERFAMILY Phospholipase D/nuclease 126 252 - -
Bma15g00411 475 CDD C2_plant_PLD 2 122 - -
Bma15g00411 475 Pfam Phospholipase D C terminal 255 298 IPR024632 -
Bma15g00411 475 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 121 IPR035892 -
Bma15g00411 475 SMART C2_3c 9 129 IPR000008 -
Bma15g00411 475 Gene3D C2 domain 4 127 IPR035892 -
Bma15g00411 475 ProSiteProfiles C2 domain profile. 1 131 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00440 Bma-Chr1:3656997 Bma15g00411 Bma-Chr15:4461030 6.25E-34 dispersed
Bma06g01083 Bma-Chr6:47657430 Bma15g00411 Bma-Chr15:4461030 1.21E-39 dispersed
Bma10g00806 Bma-Chr10:13224797 Bma15g00411 Bma-Chr15:4461030 3.61E-14 wgd
Bma15g00411 Bma-Chr15:4461030 Bma09g00903 Bma-Chr9:48415787 1.77E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00411 K01115 - jre:109013124 441.425