Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma15g00419 | ATGGAGAAGTACGAGAAACTGGAGAAGGTGGGAGAGGGAACGTATGGGAAGGTGTACAAGGCGAAAGACAAGGAGTCCGGCCAGTTTGTGGCCCTCAAGAAAACTCGGCTGGAAATGGACGACGAGGGTATCCCGCCCACCGCTCTTCGCGAGGTTTCCCTTCTTCAATTGCTCTCTCAGTCCCTCTACGTCGTCCGTCTCCTCTGCGTCGAACATGTCCATAACCATAAGAACGGTAAACCCCTTCTTTACCTCGTCTTTGAGTACCTCGATACTGACCTTAAGAAGTTCGTCGACTCCCATCGTAAGGGCCCCAACCCTAGGCCTCTCCCTGCATCTCTCATTCAGAGCTTCCTGTTCCAACTTTGCAAGGGCGTCGCCCACTGTCACAGCCACGGCGTTCTCCATCGCGATCTGAAGCCCCAGAATCTCCTTCTTGATCAGAGTAAGGGTATTCTCAAAATTGCAGATCTCGGCCTTGGTCGCGCCTTCACTGTCCCCCTTAAAAGCTACACACACGAAGTTGTCACTCTCTGGTACAGAGCTCCAGAAGTCCTCCTTGGCTCCACTCATTACTCTACTGCGGTCGACATGTGGTCCGTTGGCTGCATATTTGCTGAGATGGTAAGACGGCAAGCTTTGTTCCCTGGAGATTCAGAGTTCCAACAATTACTCCACATTTTCAGGCTGCTGGGAACTCCCAATGAGAAGCAGTGGCTTGGAGTTTCCTCACTTCTGGATTGGCATGACTATCCTGAATGGAAGCCTCAAAACCTTGCTCGAGCTGTTCCTACTCTTGGATCTGATGGCGTTGACCTTCTTTCGAAAATGCTTCTATACGATCCGGCTGAGAGGATCTCGGCCAAAGCAGCGATGAATCATGCCTACTTCGACAGTCTTGATAAGTCTCAATTTTGA | 918 | 50.98 | MEKYEKLEKVGEGTYGKVYKAKDKESGQFVALKKTRLEMDDEGIPPTALREVSLLQLLSQSLYVVRLLCVEHVHNHKNGKPLLYLVFEYLDTDLKKFVDSHRKGPNPRPLPASLIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQSKGILKIADLGLGRAFTVPLKSYTHEVVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPNEKQWLGVSSLLDWHDYPEWKPQNLARAVPTLGSDGVDLLSKMLLYDPAERISAKAAMNHAYFDSLDKSQF | 305 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 4536492 | 4538913 | - | Bma013393.1 | Bma15g00419 | 96541 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma15g00419 | 305 | ProSitePatterns | Protein kinases ATP-binding region signature. | 10 | 33 | IPR017441 | GO:0005524 | |
Bma15g00419 | 305 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 305 | - | - | |
Bma15g00419 | 305 | Gene3D | Transferase(Phosphotransferase) domain 1 | 93 | 304 | - | - | |
Bma15g00419 | 305 | SMART | serkin_6 | 4 | 297 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma15g00419 | 305 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 134 | 146 | IPR008271 | GO:0004672|GO:0006468 | |
Bma15g00419 | 305 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 91 | - | - | |
Bma15g00419 | 305 | ProSiteProfiles | Protein kinase domain profile. | 4 | 297 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma15g00419 | 305 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 300 | IPR011009 | - | |
Bma15g00419 | 305 | PANTHER | - | 1 | 305 | - | - | |
Bma15g00419 | 305 | Pfam | Protein kinase domain | 4 | 297 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02422 | Bma-Chr1:81851899 | Bma15g00419 | Bma-Chr15:4536492 | 1.94E-150 | dispersed | |
Bma03g00379 | Bma-Chr3:2882032 | Bma15g00419 | Bma-Chr15:4536492 | 1.29E-115 | dispersed | |
Bma12g00321 | Bma-Chr12:4829941 | Bma15g00419 | Bma-Chr15:4536492 | 0 | dispersed | |
Bma15g00419 | Bma-Chr15:4536492 | Bma11g00324 | Bma-Chr11:3049421 | 5.37E-70 | dispersed | |
Bma15g00419 | Bma-Chr15:4536492 | Bma08g01208 | Bma-Chr8:51074399 | 5.77E-120 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66946 | PF00069 | Pkinase | 4.80E-64 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma15g00419 | K07760 | - | csv:101204557 | 556.599 |