Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00419 ATGGAGAAGTACGAGAAACTGGAGAAGGTGGGAGAGGGAACGTATGGGAAGGTGTACAAGGCGAAAGACAAGGAGTCCGGCCAGTTTGTGGCCCTCAAGAAAACTCGGCTGGAAATGGACGACGAGGGTATCCCGCCCACCGCTCTTCGCGAGGTTTCCCTTCTTCAATTGCTCTCTCAGTCCCTCTACGTCGTCCGTCTCCTCTGCGTCGAACATGTCCATAACCATAAGAACGGTAAACCCCTTCTTTACCTCGTCTTTGAGTACCTCGATACTGACCTTAAGAAGTTCGTCGACTCCCATCGTAAGGGCCCCAACCCTAGGCCTCTCCCTGCATCTCTCATTCAGAGCTTCCTGTTCCAACTTTGCAAGGGCGTCGCCCACTGTCACAGCCACGGCGTTCTCCATCGCGATCTGAAGCCCCAGAATCTCCTTCTTGATCAGAGTAAGGGTATTCTCAAAATTGCAGATCTCGGCCTTGGTCGCGCCTTCACTGTCCCCCTTAAAAGCTACACACACGAAGTTGTCACTCTCTGGTACAGAGCTCCAGAAGTCCTCCTTGGCTCCACTCATTACTCTACTGCGGTCGACATGTGGTCCGTTGGCTGCATATTTGCTGAGATGGTAAGACGGCAAGCTTTGTTCCCTGGAGATTCAGAGTTCCAACAATTACTCCACATTTTCAGGCTGCTGGGAACTCCCAATGAGAAGCAGTGGCTTGGAGTTTCCTCACTTCTGGATTGGCATGACTATCCTGAATGGAAGCCTCAAAACCTTGCTCGAGCTGTTCCTACTCTTGGATCTGATGGCGTTGACCTTCTTTCGAAAATGCTTCTATACGATCCGGCTGAGAGGATCTCGGCCAAAGCAGCGATGAATCATGCCTACTTCGACAGTCTTGATAAGTCTCAATTTTGA 918 50.98 MEKYEKLEKVGEGTYGKVYKAKDKESGQFVALKKTRLEMDDEGIPPTALREVSLLQLLSQSLYVVRLLCVEHVHNHKNGKPLLYLVFEYLDTDLKKFVDSHRKGPNPRPLPASLIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQSKGILKIADLGLGRAFTVPLKSYTHEVVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPNEKQWLGVSSLLDWHDYPEWKPQNLARAVPTLGSDGVDLLSKMLLYDPAERISAKAAMNHAYFDSLDKSQF 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4536492 4538913 - Bma013393.1 Bma15g00419 96541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00419 305 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bma15g00419 305 PANTHER CELL DIVISION PROTEIN KINASE 1 305 - -
Bma15g00419 305 Gene3D Transferase(Phosphotransferase) domain 1 93 304 - -
Bma15g00419 305 SMART serkin_6 4 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00419 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Bma15g00419 305 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Bma15g00419 305 ProSiteProfiles Protein kinase domain profile. 4 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00419 305 SUPERFAMILY Protein kinase-like (PK-like) 1 300 IPR011009 -
Bma15g00419 305 PANTHER - 1 305 - -
Bma15g00419 305 Pfam Protein kinase domain 4 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02422 Bma-Chr1:81851899 Bma15g00419 Bma-Chr15:4536492 1.94E-150 dispersed
Bma03g00379 Bma-Chr3:2882032 Bma15g00419 Bma-Chr15:4536492 1.29E-115 dispersed
Bma12g00321 Bma-Chr12:4829941 Bma15g00419 Bma-Chr15:4536492 0 dispersed
Bma15g00419 Bma-Chr15:4536492 Bma11g00324 Bma-Chr11:3049421 5.37E-70 dispersed
Bma15g00419 Bma-Chr15:4536492 Bma08g01208 Bma-Chr8:51074399 5.77E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66946 PF00069 Pkinase 4.80E-64 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00419 K07760 - csv:101204557 556.599