Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00424 ATGGCTGTCCCTGGGTCTACTCCTGGGCAGCAGCAATTCATTGCAAGCACTGGAAACAGAAGTTTTTCTAATGTGCCGTTGATTGAGAACTCAGATGCTGATCAGATTGTTGTTCCTGACAGGAAAAGCTGGAGAAATCTATTTGCTTACATGGGACCCGGATTTCTCGTTTCGATAGCCTATATCGACCCTGGAAATTTCGAAACTGATTTACAGTCGGGGGCACAATACAAATACGAGCTACTTTGGATCATTCTAGTGGCTTCATGTGCTGCTCTTGTAATCCAGTCATTGGCTGCCAATCTTGGAGTTGTTACAGGTACTTGGTTCATAGTCCTACTCCATGTTAGTATCCTTCTTTTTTATTTTTTTTATAAATTTTGTTTTGTGATTATAGGAAAGCATTTAGCAGAGCACTGCCGAGCTGAATACCCTCGCGTTCCCAACTTAATCCTATGGGTTCTGGCTGAAATTTCAATAGTTGCATGCGACATTCCAGAGGTTATAGGAACAGCTTTTGCTTTGAACATGCTCTTCAAAATTCCGGTTTGGTGCGGGGTTCTTCTCACTGGACTCAGTACATTGATGCTTCTAGCATTACAGCAATATGGGGTCAGGAAGCTCGAGTTCTTGATAGCATTTCTCGTCCTTACAATTGCTGTTTGCTTCTTTATCGAGCTTGGCTATGCCAAGCCAGTCGCTTCGGAAGTTCTGTATGGGCTTTTTGTCCCTCAGCTCAAAGGAAATGGCGCTACTGGTCTTGCCATTTCTCTTCTTGGTGCTATGGTTATGCCCCACAATCTCTTCCTTCACTCCGCATTGGTTCTGTCCCGAAAGATTCCACGATCTGTTCGTGGAATCAAGGAAGCTTGCCGATTTTACTTAATAGAGAGTGCCTTTGCTCTCACGATCGCCTTCCTTATAAACGTGTCGGTGATTTCCGTGAGTGGTGCAGTGTGCAATTCGCGAGATTTAAATGCAGAAGACGGGAAGAACTGCAAAGACTTGGACTTGAACTCAGCCTCCTTTTTACTGAGAAATGTGTTGGGTAGTTGGAGCTCGAAGCTTTTCGCAGTTGCTTTGTTGGCATCTGGCCAAAGTTCTACCATTACAGGCACTTATGCAGGCCAGTATGTAATGCAGGGATTTCTCGACTTAAGATTGAAGCCATGGCTCCGGAACTTTCTAACGCGATGTTTGGCAATAGTCCCTAGTTTGGTCGTTGCTCTCATTGGCGGCTCTGCCGGAGCTGGGAGGCTGATTATAATTGCATCGATGATTTTGTCGTTCGAACTACCCTTTGCTCTAGTTCCTCTTCTCAAATTCACTAGCAGCAAGGCCAAGATGGGGATGTATGCGAATTCGATCGGGGTAAAATTCCCTGTCTTTTCTTCTACCCCTGTTCTTAGTCAAGAATTTATTCATTTCACTCTCTGGGATTTGCAGATTTCAGCTCTTACCTGGATAGTCGGTTTCCTGATCATGGCCATCAACATATACTATCTAGTGTCAGGCTTTGTTGGTCTTCTTTTTCATAGAAATTTAGGTATTTTGGCTGTTGTCCCCCTCGGGATCACGGGATTTTCTGCTATCGGTCTGTATTTGGCCGGAATTGCTTATTTGGTTTTGCGAAAAAACAAAGGCAAAGAAGCTACTGATCTTCTATCCTTGACAATGCCGGAAGTAGCCGACGAAGCCAGCAATGGTGCAATCCATTGTCTCCCCCGAGAAGACATCGTCTCCATGCAATTGCCCCAGAGAGGCAGCACGGCCGATGTGGACTGA 1785 45.04 MAVPGSTPGQQQFIASTGNRSFSNVPLIENSDADQIVVPDRKSWRNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSLAANLGVVTGTWFIVLLHVSILLFYFFYKFCFVIIGKHLAEHCRAEYPRVPNLILWVLAEISIVACDIPEVIGTAFALNMLFKIPVWCGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVLTIAVCFFIELGYAKPVASEVLYGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYLIESAFALTIAFLINVSVISVSGAVCNSRDLNAEDGKNCKDLDLNSASFLLRNVLGSWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLVVALIGGSAGAGRLIIIASMILSFELPFALVPLLKFTSSKAKMGMYANSIGVKFPVFSSTPVLSQEFIHFTLWDLQISALTWIVGFLIMAINIYYLVSGFVGLLFHRNLGILAVVPLGITGFSAIGLYLAGIAYLVLRKNKGKEATDLLSLTMPEVADEASNGAIHCLPREDIVSMQLPQRGSTADVD 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4599585 4602926 - Bma013398.2 Bma15g00424 96546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00424 594 PRINTS Natural resistance-associated macrophage protein signature 180 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PRINTS Natural resistance-associated macrophage protein signature 425 444 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PRINTS Natural resistance-associated macrophage protein signature 152 178 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PRINTS Natural resistance-associated macrophage protein signature 255 278 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PRINTS Natural resistance-associated macrophage protein signature 205 226 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PRINTS Natural resistance-associated macrophage protein signature 365 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PRINTS Natural resistance-associated macrophage protein signature 393 410 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 Pfam Natural resistance-associated macrophage protein 111 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 Pfam Natural resistance-associated macrophage protein 67 108 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 109 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 480 594 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 109 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 PANTHER METAL TRANSPORTER NRAMP1 10 109 - -
Bma15g00424 594 PANTHER METAL TRANSPORTER NRAMP1 480 594 - -
Bma15g00424 594 PANTHER METAL TRANSPORTER NRAMP1 109 458 - -
Bma15g00424 594 Hamap Divalent metal cation transporter MntH [mntH]. 31 506 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bma15g00424 594 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 130 449 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02078 Bma-Chr1:76251511 Bma15g00424 Bma-Chr15:4599585 4.11E-38 dispersed
Bma06g00366 Bma-Chr6:9116207 Bma15g00424 Bma-Chr15:4599585 2.80E-98 dispersed
Bma06g00653 Bma-Chr6:35092702 Bma15g00424 Bma-Chr15:4599585 3.06E-180 dispersed
Bma10g00031 Bma-Chr10:380525 Bma15g00424 Bma-Chr15:4599585 4.32E-29 dispersed
Bma15g00424 Bma-Chr15:4599585 Bma03g01128 Bma-Chr3:14874165 3.70E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00424 K21398 - mnt:21396684 845.884