Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00435 TCTACAACTACCTCTCCTTTTCTGGATAATTTTTCTTCGTCAATGGCGACCCAAACGAAGCCGGGTGATTTCATCTTTAGGTCCAAGCTTCCCGATATTTCGGTCCCGAAGCATCTCCCTCTCCACGCGTATTGTTTCGAGAACATAGCCGAGTTTGGGTCTCGAACGTGTTTGATAAACGGCGCGACCGGAGAGAAATATACCTACGATGAAGTCAGGCGGACGTCGATCAAGGTCGCGAAGGGGCTGAGTAAACTCGGGTTCAGAAAAGGGGACGTGGCGATGCTCTTGGTACCCAATTCGCCGGAATTTATCTTCGTCTTTTTGGCTGCTTCGTTTCTCGGCGCGATCACGACCGCCGCGAACCCGTTCTTCACCCCTGCCGAGATCGAAAAGCAAGCGAAAGCTTCGAAAGCGAAAATCATCATAACTCAAGCTTCATTCTACCCCAAAGTAAAGCATTTGGCTCAAGAGTCTGAACCAAACAGTGTCAAGATAATCTGCACTGATTCAGCCATAGATGGCTGCCTGCATCTTTCTTCTGTAATCGAAGACGATGACGAAACAGCCATACCCGACGTCAAGATCAACCCAGATGACGTCGTTGCACTGCCATATTCGTCAGGCACAACAGGATTTCCAAAAGGAGTAATGTTAACCCACAAAGGGCTAGTAACAAGTGTCTCTCAGCAAGTAGACGGAGAGAATCCAAACCTGTACTACCACAAAGACGATGTCGTTCTCTGCGTGTTGCCTCTCTTTCATATTTACGCTCTGAACTCCGTGTTTCTCTGCTCTTTGAGAGTGGGAGCCGCAGTTCTGATCTTGCAGAAGTACGAAATAGTTTCGTTTCTGCAGATGATAGAGAAGTACAAGGTTTCCTCCGTGCCGGTGGTTCCGCCGATCGTGTTAGCCATGGCTAGGTCGCCGGAGGTTGATAAGTATGATCTTTCTTCTATTCGGGTGCTGAAATCTGGCGGGGCTCCTCTGGGGAAGGAGATCGAGGACTGCGTGAAATCCAAGTTTCCCATGGCCGTGTTTGGTCAGGGATACGGAATGACGGAGGCAGGCTCGGTTCTGACGATGAGTTTAGGATTTGCGAAGCGACCATGGAAAGTAAAAGCTGGCGCCTGTGGAACCGTCGTAAGAAATGCAGAGATGAAGATTGTTGATACTGAAACTGGAGCTTCATTGCCTTGTAATTCTCGTGGCGAAATTTGCATTAGAGGAGACCAAATCATGAAAGGTTGTTTATCTAGATCGTTGCAACACAGTCATGTCTTAAATTCTTCAGAGCTGAGATTAAAATGTTGGAACTCGGTTTTAGGTTATCTGGATGATCCGGAGGCGACGGCTAGGACGATAGACGAAGAAGGATGGCTGCACACCGGCGATATAGGCTTCATAGACGAAGACGACGAACTTTTCATCGTCGACAGGCTGAAGGAACTCATCAAATTCAGAGCGTTTCAGGTCGCTCCGGCTGAGCTGGAAGCCATTTTACTCACCCACCCCTCCATCTCCGACGCCGCCGTCGTCCCGATGAAAGACGATCAAGCCGGAGAAGTTCCCGTTGCATTTGTGGTTGCACCGGAAAATTCACAAATCACAGAGGACGAAATAAAGCAGTTCGTGTCAAAGCAGGTAAATTCGTTTTTTTCGATCTCCGATTTCCAGACTGTTTGGAAGGGAAGTTTACTGGCTGTTTTGACGCAGGTTGTGTTCTACAAAAGATTAAACCGAGTATTTTTCATCGACGCAGTACCAAAATCGCCGTCCGGCAAGATATTAAGGAAAGAATTGAGAGCGAAACTGGAGAATGGTCATTCCTAA 1833 47.95 STTTSPFLDNFSSSMATQTKPGDFIFRSKLPDISVPKHLPLHAYCFENIAEFGSRTCLINGATGEKYTYDEVRRTSIKVAKGLSKLGFRKGDVAMLLVPNSPEFIFVFLAASFLGAITTAANPFFTPAEIEKQAKASKAKIIITQASFYPKVKHLAQESEPNSVKIICTDSAIDGCLHLSSVIEDDDETAIPDVKINPDDVVALPYSSGTTGFPKGVMLTHKGLVTSVSQQVDGENPNLYYHKDDVVLCVLPLFHIYALNSVFLCSLRVGAAVLILQKYEIVSFLQMIEKYKVSSVPVVPPIVLAMARSPEVDKYDLSSIRVLKSGGAPLGKEIEDCVKSKFPMAVFGQGYGMTEAGSVLTMSLGFAKRPWKVKAGACGTVVRNAEMKIVDTETGASLPCNSRGEICIRGDQIMKGCLSRSLQHSHVLNSSELRLKCWNSVLGYLDDPEATARTIDEEGWLHTGDIGFIDEDDELFIVDRLKELIKFRAFQVAPAELEAILLTHPSISDAAVVPMKDDQAGEVPVAFVVAPENSQITEDEIKQFVSKQVNSFFSISDFQTVWKGSLLAVLTQVVFYKRLNRVFFIDAVPKSPSGKILRKELRAKLENGHS 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4732976 4735053 + Bma013409.1 Bma15g00435 96557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00435 610 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 571 606 - -
Bma15g00435 610 Pfam AMP-binding enzyme 47 487 IPR000873 -
Bma15g00435 610 Gene3D - 482 608 IPR045851 -
Bma15g00435 610 Gene3D - 16 481 IPR042099 -
Bma15g00435 610 Pfam AMP-binding enzyme C-terminal domain 496 595 IPR025110 -
Bma15g00435 610 SUPERFAMILY Acetyl-CoA synthetase-like 25 607 - -
Bma15g00435 610 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 432 552 - -
Bma15g00435 610 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 19 419 - -
Bma15g00435 610 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 419 - -
Bma15g00435 610 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 432 552 - -
Bma15g00435 610 CDD 4CL 35 601 - -
Bma15g00435 610 ProSitePatterns Putative AMP-binding domain signature. 204 215 IPR020845 -
Bma15g00435 610 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 571 606 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00368 Bma-Chr1:3042403 Bma15g00435 Bma-Chr15:4732976 0 dispersed
Bma12g00947 Bma-Chr12:41390616 Bma15g00435 Bma-Chr15:4732976 4.54E-11 dispersed
Bma13g00643 Bma-Chr13:15570133 Bma15g00435 Bma-Chr15:4732976 0 dispersed
Bma13g00646 Bma-Chr13:15816539 Bma15g00435 Bma-Chr15:4732976 6.43E-13 dispersed
Bma15g00260 Bma-Chr15:2567570 Bma15g00435 Bma-Chr15:4732976 1.28E-124 dispersed
Bma15g00435 Bma-Chr15:4732976 Bma14g00445 Bma-Chr14:5144008 3.88E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00435 K01904 - qsu:112001847 768.459