Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00469 ATGGATGATAGTTGTGCGGTGTGTGCTGACGTTCTGGAGTGGGTAGCCTATGGACCTTGTGGGCACAGGGATGTTTGCTCTACGTGTGTCACTCGTCTTCGATTCATCTGTGAAGATCGACGCTGCTGTATTTGTAAGTCGGAGTCGGACGTAGTTTTTGTCACCAAGGCTTTAGGAGATTATACACGTACAATTGGTGACTTTTCAGTCCTACCGTCCCAACCAAGGGAAGGTCGTGTGGGATCATATTGGTTCCATGAAGACACACAAGCATTTTTTGATGATGTGGACCATTACAAGATGATTAAGGCAATGTGTAGGCTGTCGTGCAGTGTTTGTGATAAGATGGAGGAGCAACCACTTGACGGCTCAAAGCGTCAAGTGAGGTTCAGGAATGTTGAACAGCTAAAGGGTCATTTGTTCCACCGACATAAGCTACTTATGTGCAGTCTATGTTTGGAAGGAAGAAAGGTTTTTATTTCTGAACAAAAGCTATATACTAGACCTCAACTGAATCAACATATTAGCACTGGTGACTCTGAGGTGGATGGGAGCGAGAGGGAGAGAGGTGGATTTGCAGGACATCCTACGTGTGAATATTGCCAAACTCCATTTTATGGGGATAATGAACTGTACTTGCACATGTCAACTGAACACTTTACTTGTCATATATGCCAAAGACTCCATCCTAGCCAATATGATTATTTCAGAAATTATGATGACCTAGAGATTCATTTCCGCCATGACCATTTCCTGTGTGAAGATGAGGCCTGCTTGGCTAAGAAGTTTATTGTCTTCCAGTCTGAAGTTGAAATGAAGAGGCATAACACTATTGAACATGGAGGCCGATTATCTCGTTCTAAGCGTAATGCTGCTCTCCAGATTCCTACTAGTTTCCGTTATAGACGAGGCAATGATCAAGATCATCGTCGAGGAGGTAGGACGTTTCGTCGTGATCCTTCTGACAACCAACTTTCCATGGCCATTCAAGCAAGTTTGGAGACAGCTAATTCAGAAGGATCAATGCATGATTTCTCAGGACCATCATTAGGTGGACAAATTGACTCTGAGAGCCGTATTGATCCTTTAATCCAACCACTTGAATTGTTGGACGTTGATCCTGAATCAGCTTCTCGCTATCTTCAAGCATTAGGACATGCTAGGAACGCAACTTTGGAAGAAGCATCTTTTCCACCTCTTTCTGTGGCGCCTAGCAGCAGTCATGCAAATACCAAACAAGATTCTGATAAATTGCCTAGCAATACTATGGCAGCACGTCTACGTCAGCAAAGGAAAGTAAACGTTGTAAATTCAGCTCAAGGATGGCCAGCAGCAAGACTTGGACCTTCTTTTCCATCTAAGAAGTCAGCTGAAGCTTGGCCAGCAATTAATGGTACACATACAGCATCACACAGTTCAGGGATGTCTAAAGTTGGTATTAGTAGTGGACCTTCACCATCGAGTTCTGCTGTAGCTCAGGTACAAGCTGGACCAAGGATGGTCCGTGGGGGTGGGCTACCTGCTAGCGGTTCTTCAGGGGAATCAACCAGTGGTAGCAGAATAACTCATTCTGCTTCAGCTCCCTGTCTCTCTGAAAAAGAATTTGTTGATCGTTCTGGCATCGATTTCCCTCCTGTTACTTCAGCACAAACACGAAAGGCGCCTCCTATGAGCCAGAATTTACTGAATGTGGAAGATGTTCAGACAGCCAATAAGTCCTTGGTTGAAAAGATACGCACTGCTCTAGAAAATGACCCAGACAGATATAATATTTTTAAAGATATATCTGGACAGTATCGCCAGGGTTTAATTGATACAGAAATATATCTGGATTTTGTGCAGCAGTTTGGCTTGTCACATCTTGTAATCGAGTTAGCTAGACTTTGCCCTGATGTGCTGAAGCAGAAAGAACTTCTTGAGATGTACAGTTTAAGGTCACAAAGTGTTGGATCAAGAGAAAACGGTCATAATCTGGAAGGCAACCAGTCGAAAGAAAAGAAAGGTGCCAAGAAAGGTAAAGGAAAGGCCATAGATCCAATGGACACCTTGGCGGATAATGTGATGAGCTCTTTGAGGAAATTGCAGGCTGACATCAAGCCTTCTGACATTGAGGTAGAGGTATTATTAAAGGATGGTTATCGGGCTGCAACAAAAGGGAAATCAAAGGTCATATCTGATGAGCCAAAACTGGTGTTGAGAAATCAAGATGAATTTCCACCTGCTGTCAGTGAAGTAAAACCAAATACTGGGGATGTGGTTGGTGGCAGCAAGCAGCGGAAAAAAACGTCGAAGTTCCACAGAGTTCGCCTAGGTGATGGCTCTTTCTCTGCCCTCCTGGATTCCAAAAATTCCAATCCCGTGTCAGACCCAGATCAAGAAAGTGGGAATTCAGATAGCAAAAAGAAAGTCGAAGGGGCATTGCCTGTGCGTGGAGTTTGGCGAAATGGCGGTGGTAATAAGCTATTTCCTTAG 2472 44.01 MDDSCAVCADVLEWVAYGPCGHRDVCSTCVTRLRFICEDRRCCICKSESDVVFVTKALGDYTRTIGDFSVLPSQPREGRVGSYWFHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKMEEQPLDGSKRQVRFRNVEQLKGHLFHRHKLLMCSLCLEGRKVFISEQKLYTRPQLNQHISTGDSEVDGSERERGGFAGHPTCEYCQTPFYGDNELYLHMSTEHFTCHICQRLHPSQYDYFRNYDDLEIHFRHDHFLCEDEACLAKKFIVFQSEVEMKRHNTIEHGGRLSRSKRNAALQIPTSFRYRRGNDQDHRRGGRTFRRDPSDNQLSMAIQASLETANSEGSMHDFSGPSLGGQIDSESRIDPLIQPLELLDVDPESASRYLQALGHARNATLEEASFPPLSVAPSSSHANTKQDSDKLPSNTMAARLRQQRKVNVVNSAQGWPAARLGPSFPSKKSAEAWPAINGTHTASHSSGMSKVGISSGPSPSSSAVAQVQAGPRMVRGGGLPASGSSGESTSGSRITHSASAPCLSEKEFVDRSGIDFPPVTSAQTRKAPPMSQNLLNVEDVQTANKSLVEKIRTALENDPDRYNIFKDISGQYRQGLIDTEIYLDFVQQFGLSHLVIELARLCPDVLKQKELLEMYSLRSQSVGSRENGHNLEGNQSKEKKGAKKGKGKAIDPMDTLADNVMSSLRKLQADIKPSDIEVEVLLKDGYRAATKGKSKVISDEPKLVLRNQDEFPPAVSEVKPNTGDVVGGSKQRKKTSKFHRVRLGDGSFSALLDSKNSNPVSDPDQESGNSDSKKKVEGALPVRGVWRNGGGNKLFP 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5205147 5208683 - Bma013447.1 Bma15g00469 96591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00469 823 PANTHER EBR1 1 821 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 658 678 - -
Bma15g00469 823 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Bma15g00469 823 MobiDBLite consensus disorder prediction 303 318 - -
Bma15g00469 823 CDD RING-HC_ZNF598 5 46 IPR041888 -
Bma15g00469 823 MobiDBLite consensus disorder prediction 400 418 - -
Bma15g00469 823 ProSitePatterns Zinc finger C2H2 type domain signature. 198 219 IPR013087 -
Bma15g00469 823 MobiDBLite consensus disorder prediction 775 823 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 465 525 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 509 525 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 738 763 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 465 494 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 303 356 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 319 344 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 649 679 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 777 793 - -
Bma15g00469 823 MobiDBLite consensus disorder prediction 398 418 - -
Bma15g00469 823 PANTHER ZINC FINGER PROTEIN 598 1 821 IPR044288 GO:0061630|GO:0072344
Bma15g00469 823 SMART c2h2final6 220 250 IPR013087 -
Bma15g00469 823 SMART c2h2final6 108 144 IPR013087 -
Bma15g00469 823 SMART c2h2final6 251 280 IPR013087 -
Bma15g00469 823 SMART c2h2final6 196 219 IPR013087 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00469 K22381 - csv:101214376 1039.25