Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00479 GGGCATGACGGTGGTAACAGACACCATGAAGCTGTGCCTAAGCCCCCTCAAATCGTAAAACCTCAGCCTATTGAAGTTCCTGCCATACGAGCAGATGAACTGAAAGAAGTTACAAATAACTTTGGAACAGATTGTTTGATTGGAGAAGGGTCGTTTGGGAGAGTTTACCATGGTGTTCTGAAAAACGGTGAACAAGCAGCAATTAAAAAGCTAGATGCCAGTAAACAACCCAATGATGAATTCTTAGCTCAGGTTTCCTTGGTTTCAAGGCTGAAGCATGGAAATTTTGTTCAATTGCTCGGCTACTGTGTGGATGGAAATTCCCGAATTCTTGCCTATGAGTTTGCATCTAATGGATCTCTTCATGACATTTTACATGGTAGGAAAGGAGTGAAAGGGGCACAACCTGGTCCTGTTCTGACCTGGGCACAACGAGTTAAAATTGCTGTGGGAGCTGCTAAAGGGCTTGAATATTTGCATGAAAAAGCTGATCCTAGTGTCATTCATCGCGATATCAAATCTAGCAATGTGCTAATCTTTGATGATGATGTTGCTAAAATTGCTGACTTTGATTTATCTAATCAAGCTCCGGATATGGCAGCTCGCCTTCATTCTACCCGTGTTCTTGGGACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGACAGTTGAATGCCAAGAGTGATGTATACAGCTTTGGTGTTGTTTTGCTTGAACTTCTGACTGGAAGAAAGCCTGTTGATCCTACGTTACCTCGAGGGCAGCAAAGTCTCGTCACCTGGGCCACTCCAAAACTTAGTGAAGACAAAGTCAGGCAGTGTGTTGACGCAAGATTAGGAGGAGATTACCCTCCTAAGGCTGTTGCAAAGTTGGCTGCAGTAGCAGCCTTATGCGTGCAATACGAATCAGATTTCCGACCCAACATGACCATCGTCGTCAAAGCCCTTCAGCCGCTGTTAGTTGTACGAAGTGCTGGTCCTGCCGGTGATACATCAGGCCTG 1005 44.98 GHDGGNRHHEAVPKPPQIVKPQPIEVPAIRADELKEVTNNFGTDCLIGEGSFGRVYHGVLKNGEQAAIKKLDASKQPNDEFLAQVSLVSRLKHGNFVQLLGYCVDGNSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAAKGLEYLHEKADPSVIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDPTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPKAVAKLAAVAALCVQYESDFRPNMTIVVKALQPLLVVRSAGPAGDTSGL 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5510121 5512322 - Bma030809 Bma15g00479 96601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00479 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Bma15g00479 335 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 332 - -
Bma15g00479 335 Pfam Protein tyrosine and serine/threonine kinase 46 317 IPR001245 GO:0004672|GO:0006468
Bma15g00479 335 Gene3D Transferase(Phosphotransferase) domain 1 116 325 - -
Bma15g00479 335 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Bma15g00479 335 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 332 - -
Bma15g00479 335 MobiDBLite consensus disorder prediction 1 20 - -
Bma15g00479 335 SUPERFAMILY Protein kinase-like (PK-like) 19 317 IPR011009 -
Bma15g00479 335 ProSiteProfiles Protein kinase domain profile. 41 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00479 335 SMART serkin_6 41 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00479 335 Gene3D Phosphorylase Kinase; domain 1 8 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00479 Bma-Chr15:5510121 Bma10g00957 Bma-Chr10:20973031 1.82E-92 dispersed
Bma15g00479 Bma-Chr15:5510121 Bma09g00825 Bma-Chr9:47108775 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66949 PF07714 PK_Tyr_Ser-Thr 2.00E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00479 K13436 - tcc:18613791 568.926