Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma15g00491 | ATGGCCTCGATTAATAAACAATCAAGCTCTGGATCCGATGGAGATCCGAGATTCCCTGGGATTGACGACAGGAAGAGGAAGAGAATGGAGTCGAATCGTGAATCGGCTCGACGATCGAGGATGAGAAAGCAGAAGCAGCTGGAAGATCTGACTGGGGAAATGAGCCGTTTGCAGATTGCGAGCAATCAGCTTTTGCAAAGCATCAATGCCAAGGAGCAGGCTTACCTTCAGGCAGAGTCTGCAAACAATGTTTTGAGGGTCCAAGTAATGGAACTCACTGATCGTTTACGCTCCTTGAACTCGGTTCTCCACATTGTTCAAGAGGTCAGCGGACTGGCAGTTGATATTCCTGAAATTCCCGATCCTCTGTTAAAGCCATGGCAACTTCAGCAGCCAATCCAGCCTATAATGGCGTCTGCGGACATGTTTTTGGTTTAA | 438 | 47.95 | MASINKQSSSGSDGDPRFPGIDDRKRKRMESNRESARRSRMRKQKQLEDLTGEMSRLQIASNQLLQSINAKEQAYLQAESANNVLRVQVMELTDRLRSLNSVLHIVQEVSGLAVDIPEIPDPLLKPWQLQQPIQPIMASADMFLV | 145 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 5686204 | 5686641 | - | Bma013460.1 | Bma15g00491 | 96613 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma15g00491 | 145 | Pfam | bZIP transcription factor | 24 | 71 | IPR004827 | GO:0003700|GO:0006355 | |
Bma15g00491 | 145 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 1 | 143 | - | - | |
Bma15g00491 | 145 | SUPERFAMILY | Leucine zipper domain | 24 | 76 | IPR046347 | GO:0003700|GO:0006355 | |
Bma15g00491 | 145 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 27 | 42 | IPR004827 | GO:0003700|GO:0006355 | |
Bma15g00491 | 145 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 22 | 69 | IPR004827 | GO:0003700|GO:0006355 | |
Bma15g00491 | 145 | PANTHER | BZIP TRANSCRIPTION FACTOR 53 | 1 | 143 | - | - | |
Bma15g00491 | 145 | Coils | Coil | 26 | 60 | - | - | |
Bma15g00491 | 145 | CDD | bZIP_plant_GBF1 | 25 | 75 | IPR045314 | GO:0003700|GO:0006355 | |
Bma15g00491 | 145 | Gene3D | - | 23 | 104 | - | - | |
Bma15g00491 | 145 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Bma15g00491 | 145 | MobiDBLite | consensus disorder prediction | 17 | 50 | - | - | |
Bma15g00491 | 145 | SMART | brlzneu | 20 | 84 | IPR004827 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01473 | Bma-Chr6:51355187 | Bma15g00491 | Bma-Chr15:5686204 | 1.46E-06 | dispersed | |
Bma12g00501 | Bma-Chr12:15596658 | Bma15g00491 | Bma-Chr15:5686204 | 1.47E-26 | dispersed | |
Bma15g00491 | Bma-Chr15:5686204 | Bma15g01106 | Bma-Chr15:43961526 | 4.02E-13 | dispersed | |
Bma15g00491 | Bma-Chr15:5686204 | Bma09g00793 | Bma-Chr9:46447026 | 1.12E-82 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58487 | PF00170 | bZIP_1 | 9.90E-08 | CL0018 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma15g00491 | K25786 | - | mnt:21393070 | 215.698 |