Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00491 ATGGCCTCGATTAATAAACAATCAAGCTCTGGATCCGATGGAGATCCGAGATTCCCTGGGATTGACGACAGGAAGAGGAAGAGAATGGAGTCGAATCGTGAATCGGCTCGACGATCGAGGATGAGAAAGCAGAAGCAGCTGGAAGATCTGACTGGGGAAATGAGCCGTTTGCAGATTGCGAGCAATCAGCTTTTGCAAAGCATCAATGCCAAGGAGCAGGCTTACCTTCAGGCAGAGTCTGCAAACAATGTTTTGAGGGTCCAAGTAATGGAACTCACTGATCGTTTACGCTCCTTGAACTCGGTTCTCCACATTGTTCAAGAGGTCAGCGGACTGGCAGTTGATATTCCTGAAATTCCCGATCCTCTGTTAAAGCCATGGCAACTTCAGCAGCCAATCCAGCCTATAATGGCGTCTGCGGACATGTTTTTGGTTTAA 438 47.95 MASINKQSSSGSDGDPRFPGIDDRKRKRMESNRESARRSRMRKQKQLEDLTGEMSRLQIASNQLLQSINAKEQAYLQAESANNVLRVQVMELTDRLRSLNSVLHIVQEVSGLAVDIPEIPDPLLKPWQLQQPIQPIMASADMFLV 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5686204 5686641 - Bma013460.1 Bma15g00491 96613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00491 145 Pfam bZIP transcription factor 24 71 IPR004827 GO:0003700|GO:0006355
Bma15g00491 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 143 - -
Bma15g00491 145 SUPERFAMILY Leucine zipper domain 24 76 IPR046347 GO:0003700|GO:0006355
Bma15g00491 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
Bma15g00491 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 69 IPR004827 GO:0003700|GO:0006355
Bma15g00491 145 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 143 - -
Bma15g00491 145 Coils Coil 26 60 - -
Bma15g00491 145 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Bma15g00491 145 Gene3D - 23 104 - -
Bma15g00491 145 MobiDBLite consensus disorder prediction 1 50 - -
Bma15g00491 145 MobiDBLite consensus disorder prediction 17 50 - -
Bma15g00491 145 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01473 Bma-Chr6:51355187 Bma15g00491 Bma-Chr15:5686204 1.46E-06 dispersed
Bma12g00501 Bma-Chr12:15596658 Bma15g00491 Bma-Chr15:5686204 1.47E-26 dispersed
Bma15g00491 Bma-Chr15:5686204 Bma15g01106 Bma-Chr15:43961526 4.02E-13 dispersed
Bma15g00491 Bma-Chr15:5686204 Bma09g00793 Bma-Chr9:46447026 1.12E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58487 PF00170 bZIP_1 9.90E-08 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00491 K25786 - mnt:21393070 215.698