Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00522 ATGGATTCTGCGAGGAATTGGTTTCAAAAGCTCCAACCACGAGATAAGTTAAGGACCTTATCAAAGAAAAGGGATCCCGATGGTGGAGATGACGAAGAGTCAAAGGTGTCAGCTGATGAGGAAGCTCTATCTAATACTACAAAACAGAAGGTTGCAGCAGCAAAGCAGTATATTGAGAATCACTACAAGGAGCAAATGAAGAACTTGCAGGAGAGAAAAGAACGACGAAATATCTTGGAAAAGAAGTTGGCAGATGCTGATGTTTCTGAGGAAGATCAGAACAATCTACTCAAATTTTTGGAGAAGAAGGAAACAGAATATATGAGGCTTCAAAGGCACAAAATGGGTGCAGATGATTTTGAGTTGTTGACAATGATTGGAAAAGGCGCTTTTGGAGAGGTTCGAGTTTGTAAGGAGAAAACAACGGGTCAAGTATATGCTATGAAAAAGCTAAAGAAATCAGAGATGCTTCGAAGGGGCCAGGTCGAGGCATATATGAGAAATTTGCTCGCTGAGGTGGAGAGTAACTGCATTGTCAAACTGTACTGTTCTTTTCAAGATGATGACTATCTTTATCTTATCATGGAATATCTACCTGGTGGAGATATGATGACTTTACTTATGAGGAAAGACACTTTGACTGAGGATGAAGCCAGATTTTACGTTGCACAAACAGTTTTAGCTATTGAATCTATCCATAAACGCAATTACATTCATAGAGATATCAAGCCTGACAACTTGCTGCTTGATCAATATGGACACTTGAGACTATCAGATTTTGGACTGTGTAAACCCTTGGACTGCAGCACGCTCCAAGAACAAGATTTTTCAGTTGGTAACAATTCTAAAGGGTCTGGACCAAATGACGAAGGCTCTGTGGCTTATTCTACTGTGGGCACACCAGATTATATAGCTCCTGAGGTTCTGTTGAAGAAGGGCTATGGATTGGAATGCGATTGGTGGTCACTTGGTGCTATAATGTATGAGATGCTTGTTGGCTATCCACCTTTTTATTCAGATGATCCAATGTCAACATGTAGGAAGATAGTTAACTGGAGGACTCATTTGAAGTTCCCTGAAGAAGCAAAGTTATCTCCAGAAGCAAAAGATCTTATTAGTAAGCTCTTGTGTAATGTTGGCCAGAGACTAGGGTCAAAAGGTGCATTTGAAATTAAGGCCCATACATGGTTTGAAGGTACCGAATGGGATAAGCTCTATCAAATGGAAGCTGCATTTATTCCTGCGGTAAATGATGAGCTGGATACCCAAAATTTTGAAAAGTTTGAAGAGCTTGACAACCAGAATCAGCCGTCATCCAAAACTGGTCCTTGGAGAAAGATGCTCTCATCTAAGGATATCAACTTTGTTGGCTACACATACAAGAACTTTGAGATTGTAAATGATTATCAATTGCCTGGGATGGCTGAGCTGAAGAAAAAAAGCACCAAACCGAGAAGACCATCCATCAAGTCACTTTTCGGTATGCACAAACTTGTTTCTCCTACAATAATCATTTTCCTTTTCCGGCCATTTTTGTATATGCCTGGCATTTTTATAGTCAACAAGATTAGTATTTCTCTCTCTCTCAATATAATTCTCATATTTGTGATATAA 1614 39.59 MDSARNWFQKLQPRDKLRTLSKKRDPDGGDDEESKVSADEEALSNTTKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGADDFELLTMIGKGAFGEVRVCKEKTTGQVYAMKKLKKSEMLRRGQVEAYMRNLLAEVESNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAQTVLAIESIHKRNYIHRDIKPDNLLLDQYGHLRLSDFGLCKPLDCSTLQEQDFSVGNNSKGSGPNDEGSVAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVGQRLGSKGAFEIKAHTWFEGTEWDKLYQMEAAFIPAVNDELDTQNFEKFEELDNQNQPSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKSTKPRRPSIKSLFGMHKLVSPTIIIFLFRPFLYMPGIFIVNKISISLSLNIILIFVI 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6002312 6010379 - Bma013488.1 Bma15g00522 96644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00522 537 Pfam Protein kinase domain 121 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00522 537 MobiDBLite consensus disorder prediction 9 31 - -
Bma15g00522 537 Coils Coil 62 82 - -
Bma15g00522 537 SMART pkinase_C_6 398 462 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma15g00522 537 SMART serkin_6 120 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00522 537 CDD STKc_NDR_like 118 461 - -
Bma15g00522 537 ProSiteProfiles Protein kinase domain profile. 120 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00522 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Bma15g00522 537 SUPERFAMILY Protein kinase-like (PK-like) 93 448 IPR011009 -
Bma15g00522 537 MobiDBLite consensus disorder prediction 1 48 - -
Bma15g00522 537 Gene3D Phosphorylase Kinase; domain 1 91 426 - -
Bma15g00522 537 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 24 499 - -
Bma15g00522 537 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Bma15g00522 537 ProSiteProfiles AGC-kinase C-terminal domain profile. 398 470 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma15g00522 537 Pfam Protein kinase C terminal domain 416 460 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bma15g00522 537 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 499 - -
Bma15g00522 537 Gene3D Transferase(Phosphotransferase) domain 1 202 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01065 Bma-Chr5:49339079 Bma15g00522 Bma-Chr15:6002312 0 dispersed
Bma11g00453 Bma-Chr11:5298690 Bma15g00522 Bma-Chr15:6002312 0 dispersed
Bma15g00522 Bma-Chr15:6002312 Bma10g00360 Bma-Chr10:3382980 2.44E-56 dispersed
Bma08g00193 Bma-Chr8:2310372 Bma15g00522 Bma-Chr15:6002312 3.19E-61 transposed
Bma15g00522 Bma-Chr15:6002312 Bma09g00765 Bma-Chr9:46175670 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66950 PF00069 Pkinase 1.50E-63 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00522 K08790 - jre:108982626 869.381