Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00611 ATGGCGAATAATCCGTCCGAGGCTGCAACCGACGATTTCTTAGAGCAAATTCTAACTATTCCTGCTTTCGGTTCGGCTGACTCAGGCCTGACTGGAAATGATGGCGGCTTGTCCGCTGCTCACGGTTCGATGATGCTGCAGCTCAGCTCTGGCGATGGCTCTGGCCATATGGCCTCCGTTGGTGGCGGGGGGTTTCATAGTCCTGGCTTTCCCTTGGGGTTGAGCTTGGAGCAGGGAAAGTGTGGGTTTCTGAAGCCTGAAGAGGCATCCGGAAGCGGCAAGCGGTTCTGCGGCGAGGTCGTCGATGGCCGAGGTTCATCCGTGAAAACTGTTTTCCAAGGCCAGCCAATTACCAGCAATGTTGCTGGAGCACCACATCCTCCAGCAATGCGACCAAGAGTAAGAGCAAGACGAGGACAAGCTACAGATCCCCATAGTATAGCTGAAAGGTTGCGCAGAGAAAGAATTGCAGAGAGGATCAGGGCATTGCAGGAACTGGTTCCTAGTGTCAACAAGACAGATAGAGCTGCCATGCTTGATGAAATAGTAGATTATGTAAAGTTTCTGCGACTCCAAGTGAAGGTTTTAAGCATAAGTAGATTGGGAGGTGCTGGGGCAGTAGCACCTCTTGTAACTGATATTCCATTATCATCACTGGAGGACGATGGAAGTGAAGGTGGAAGAAATCAACCAGCCTGGGAAAAGTTGTCAAATGATGGCACAGAAAGACAAGTAGCTAAGCTTATGGAAGAAAATGTTGGCGCTGCCATGCAATTTCTTCAGTCCAAGGCTCTTTGCATCATGCCCATCTCCTTAGCCTCAGCAATCTACCACACCCAACCAGCCGACACATCTAGTGTCGTCAAGCCTGAAACAAACCCACCTTCCTAG 891 50.39 MANNPSEAATDDFLEQILTIPAFGSADSGLTGNDGGLSAAHGSMMLQLSSGDGSGHMASVGGGGFHSPGFPLGLSLEQGKCGFLKPEEASGSGKRFCGEVVDGRGSSVKTVFQGQPITSNVAGAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSISRLGGAGAVAPLVTDIPLSSLEDDGSEGGRNQPAWEKLSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPADTSSVVKPETNPPS 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7800367 7804279 - Bma013603.1 Bma15g00611 96733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00611 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 198 IPR036638 GO:0046983
Bma15g00611 296 Gene3D - 135 196 IPR036638 GO:0046983
Bma15g00611 296 SMART finulus 146 195 IPR011598 GO:0046983
Bma15g00611 296 PANTHER TRANSCRIPTION FACTOR UNE12 ISOFORM X1 7 286 - -
Bma15g00611 296 MobiDBLite consensus disorder prediction 117 144 - -
Bma15g00611 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
Bma15g00611 296 MobiDBLite consensus disorder prediction 219 239 - -
Bma15g00611 296 Pfam Helix-loop-helix DNA-binding domain 145 189 IPR011598 GO:0046983
Bma15g00611 296 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 286 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma09g00617 Bma-Chr9:43393282 Bma15g00611 Bma-Chr15:7800367 1.66E-163 dispersed
Bma13g00449 Bma-Chr13:8475439 Bma15g00611 Bma-Chr15:7800367 1.89E-71 dispersed
Bma13g00455 Bma-Chr13:8578593 Bma15g00611 Bma-Chr15:7800367 2.19E-80 dispersed
Bma15g00611 Bma-Chr15:7800367 Bma06g01401 Bma-Chr6:50785189 2.69E-21 dispersed
Bma15g00611 Bma-Chr15:7800367 Bma14g01254 Bma-Chr14:20440056 5.84E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58495 PF00010 HLH 1.10E-07 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00611 - - zju:107425922 447.973