Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00618 ATGAACGACACTTTCTTCTTCAAAAATACTTCTGCTAGGAAGAGGTGGCGATTGGCCTTTGCCGCAATCTATTGTCTTCGAGTCATACTGTCTATTGCCAAAGACACTAAATCCAAAAGAAATGACAATGGAGTTTCGAAGACATGTTCGTACACCATCCATGATTTTGAACCATCCTTGACTTTCGCTTGCGACACGGTATCTGGCATCCGAAAACCAGAAATCTGGAGTAATAGTCAAGCTCAAAGAAGATGGCGCATTGTCTATGTGACAATCTCATTTGTACAAATCATGGTCTCCCACGCCAGAAAGATCAAATCAGAAGAGGATGAGTATTACAACTCAGAGATTTTGGAGGAGAATCTTTCTATCATAGAAGGCTGGTATGAAGGAGGAAGCATAGCTGTTGCTGTCTTTTTAGTTGTTGTCGTCTCTGCAAGCAGTAACTTCAGACAGGAAAATCAATTCGACAAGTTGTCAAAAATAAGCAACAACATCAAAGTAGAAGTACTGAGAGACAGCCGACGTCAACAAATTTCTATATTTGATGTCGTAGTCGGAGACATAGCATTCCTCAAGATTGGAGATCAAATTCCAGCCGACGGGTTGTTCTTAGACGGCCACTCTTTGCAAGTGGACGAATCAAGCATGACAGGAGAGAGTGACCACGTGGAAATAAATTCCACTCTAGATCCATTCCTATTATCTGGTTCAAAGGCGGTAGATGGGTATGGTAGGATGTTAGTCACATCAGTGGGCATGAAAACGGCATGGGGGGAAATGATGAGCTCAATAACTCAGGAGAATGAAGAGCAAACACCCCTACAAGTTCGACTAAATACCTTAACATCTTCTATTGGAAAGGTTGGCCTCTCAGTAGCACTTTTAGTCCTCCTAGTTCTATTGGTACGCTATTTCACTGGGAATACAACAGACGAGAATGGGAATAAAGAGTATAATGGTAGCAAAACAGAAGTAAATGATGTATTCGATGCAATTATCCGCATTATTGCTGCTGCAGTCACCATTGTGGTGGTTGCAATCCCAGAAGGATTGCCGTTGGCCGTCACCCTCACACTTGCTTACTCCATGAAACGAATGATGGTGGATCAAGCAATGGTGAGAAAACTTTCAGCTTGTGAGACGATGGGATCCGCAACAGTTATTTGCACTGACAAAACAGGTACTCTGACATTGAATAAAATGAAGGTAACCAAGTTTTGGTTAGGCCAGTCTTTCCAACGAGATGATTCTTACCAAATAATGGCACAAAATATTTACGAGTTAATATATCAAGGAGTAAGCTTCAACACTACTGGAAGTGTTTACAAACCATTACCAGGATCCATACCTGAAATTTCTGGTAGTCCAACTGAAAAGGCGATCCTTTCTTGGGCTATTTTAGAGTTGGGAATGGACATGGAAAAGATGAAGAAATCTCATACCATCCTTCATGTGGAGACCTTCAACTCGGACACGAAAAGGAGTGGAGTTGCAATTAAAAAAGAGTCTGATGGAACCATCCATGTGCATTGGAAAGGAGCAGCAGAGATTGTACTAGCAATGTGTTCCGACTATTATGAAAGCGATGGAACCATAAAGCCTCTTGACAAGGATAAACGAAGCATAATCAATAAAATAATCCAAGGCATGGCAGCCAGTACTCTCCGATGCATTGCTTTTGCTCATAGACAAATTTCAGAGGACAAAATTTATTCCAACAAAGACGATGGTACCCGCCGAAGGCTCAAAGATGATGATTTTATGTTGCTGGGGATTATAGGATTAAAGGATCCATGTCGACCAGGGGTAAAGAAGGCAGTGCAAACATGCAAATCAGCAGGAGTTTCAATCAAAATGATTACTGGAGATAACATATTCACAGCAAAAGCCATAGCTACAGAATGTGGAATTCTAGATCCTGACTACGAAGTAAGCAATGAAGAAGTTATAGAAGGCACTGAATTTCGTAACTATACACATGAAGAGAGAATGCAAAAGGTTGACAAGATTCTTGTGATGGCCAGATCATCACCTCTTGACAAGCTTTTGATGGTTAGGTGCTTGAAACAGAAAGGTCACGTGGTTGCAGTCACCGGAGATGGCACTAATGACGCACCGGCACTAAAAGAAGCAGATGTAGGACTTTCTATGGGAGTGGAGGGCACAGAGGTGGCTAAGGAGAGCTCAGACATTGTCATCCTGGATGACAACTTCACTTCTGTTGCCACTGTTCTAAAGTGGGGGCGGTGTGTTTATAACAACATTCAGAAGTTTATCCAGTTTCAGTTGACCGTGAACGTGGCAGCTCTAGTAATCAACTTTATAGCAGCAGTTTCTGCTGGTGAGGTTCCTTTAACAACGGTCCAGCTACTGTGGGTAAATCTAATTATGGACACATTGGGGGCTCTTGCTCTTGCTACTGAGCGGCCTACTAATGAGTTGATGCATCATCCCCCAGTGGGTAGGACGGAGCCCCTTATAACAAATATTATGTGGAGAAACCTTTTATCTCAAGCATTATATCAGATAGCAATTCTCTTGATATTCCAATTTAAAGGTGAATCTCTACTCAATGTGGGAAATGAGGTGAAAAATACAGTTATTTTCAATACTTTTGTTTTCTGCCAAGTTTTTAATGAATTCAACTCGAGAAGATTGGAGAAGAAGAACATCTTTGAAGGCATTTCAAAGAATCATTTATTTCTGGGAATTGTGGGAATAACTATTCTTCTTCAAGTTATGATGGTAGAATTCATGGGAAAGTTTGCTAAGACGGTGAAGCTAAATAGCTTGCAGTGGGGAGTTTGTATTGCTATTGCAGCACTGACATGGCCGATTGGATGGCTAGTGAAGTCTGTTCCTGTTTCGGAAAAACCATTCCTCAGCTACCTCAGGAAAAGAAATTCACACCAGTAA 2919 41.49 MNDTFFFKNTSARKRWRLAFAAIYCLRVILSIAKDTKSKRNDNGVSKTCSYTIHDFEPSLTFACDTVSGIRKPEIWSNSQAQRRWRIVYVTISFVQIMVSHARKIKSEEDEYYNSEILEENLSIIEGWYEGGSIAVAVFLVVVVSASSNFRQENQFDKLSKISNNIKVEVLRDSRRQQISIFDVVVGDIAFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEINSTLDPFLLSGSKAVDGYGRMLVTSVGMKTAWGEMMSSITQENEEQTPLQVRLNTLTSSIGKVGLSVALLVLLVLLVRYFTGNTTDENGNKEYNGSKTEVNDVFDAIIRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMVDQAMVRKLSACETMGSATVICTDKTGTLTLNKMKVTKFWLGQSFQRDDSYQIMAQNIYELIYQGVSFNTTGSVYKPLPGSIPEISGSPTEKAILSWAILELGMDMEKMKKSHTILHVETFNSDTKRSGVAIKKESDGTIHVHWKGAAEIVLAMCSDYYESDGTIKPLDKDKRSIINKIIQGMAASTLRCIAFAHRQISEDKIYSNKDDGTRRRLKDDDFMLLGIIGLKDPCRPGVKKAVQTCKSAGVSIKMITGDNIFTAKAIATECGILDPDYEVSNEEVIEGTEFRNYTHEERMQKVDKILVMARSSPLDKLLMVRCLKQKGHVVAVTGDGTNDAPALKEADVGLSMGVEGTEVAKESSDIVILDDNFTSVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTTVQLLWVNLIMDTLGALALATERPTNELMHHPPVGRTEPLITNIMWRNLLSQALYQIAILLIFQFKGESLLNVGNEVKNTVIFNTFVFCQVFNEFNSRRLEKKNIFEGISKNHLFLGIVGITILLQVMMVEFMGKFAKTVKLNSLQWGVCIAIAALTWPIGWLVKSVPVSEKPFLSYLRKRNSHQ 972
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7843658 7846938 + Bma013610.1 Bma15g00618 96740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00618 972 PRINTS Sodium/potassium-transporting ATPase signature 510 528 - -
Bma15g00618 972 PRINTS Sodium/potassium-transporting ATPase signature 383 404 - -
Bma15g00618 972 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 332 431 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma15g00618 972 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 672 779 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma15g00618 972 PRINTS P-type cation-transporting ATPase superfamily signature 592 603 - -
Bma15g00618 972 PRINTS P-type cation-transporting ATPase superfamily signature 723 735 - -
Bma15g00618 972 PRINTS P-type cation-transporting ATPase superfamily signature 390 404 - -
Bma15g00618 972 PRINTS P-type cation-transporting ATPase superfamily signature 213 227 - -
Bma15g00618 972 PRINTS P-type cation-transporting ATPase superfamily signature 614 624 - -
Bma15g00618 972 PRINTS P-type cation-transporting ATPase superfamily signature 699 718 - -
Bma15g00618 972 PANTHER CALCIUM-TRANSPORTING ATPASE 125 943 - -
Bma15g00618 972 SUPERFAMILY Calcium ATPase, transduction domain A 165 264 IPR008250 -
Bma15g00618 972 Gene3D - 600 716 IPR023214 -
Bma15g00618 972 SFLD p-type atpase 372 752 IPR044492 -
Bma15g00618 972 SUPERFAMILY Calcium ATPase, transmembrane domain M 125 956 IPR023298 -
Bma15g00618 972 PANTHER CATION TRANSPORTING ATPASE 125 943 - -
Bma15g00618 972 Pfam haloacid dehalogenase-like hydrolase 388 713 - -
Bma15g00618 972 Gene3D - 446 599 IPR023299 GO:0000166
Bma15g00618 972 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 125 956 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bma15g00618 972 Gene3D - 717 958 - -
Bma15g00618 972 Gene3D - 141 243 - -
Bma15g00618 972 SFLD Haloacid Dehalogenase 372 752 - -
Bma15g00618 972 SUPERFAMILY HAD-like 388 804 IPR036412 -
Bma15g00618 972 ProSitePatterns E1-E2 ATPases phosphorylation site. 392 398 IPR018303 -
Bma15g00618 972 Pfam Cation transporting ATPase, C-terminus 784 953 IPR006068 -
Bma15g00618 972 Gene3D - 244 414 - -
Bma15g00618 972 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 397 596 IPR023299 GO:0000166
Bma15g00618 972 Pfam E1-E2 ATPase 166 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma08g00675 Bma-Chr8:41787877 Bma15g00618 Bma-Chr15:7843658 1.22E-65 dispersed
Bma13g00451 Bma-Chr13:8513273 Bma15g00618 Bma-Chr15:7843658 0 dispersed
Bma13g00456 Bma-Chr13:8604370 Bma15g00618 Bma-Chr15:7843658 0 dispersed
Bma13g01184 Bma-Chr13:45120643 Bma15g00618 Bma-Chr15:7843658 0 dispersed
Bma15g00618 Bma-Chr15:7843658 Bma06g00346 Bma-Chr6:7696879 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00618 K01537 - tcc:18613267 1277.31