Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00623 ATGGGTAATTCTGATTTCGTCTACTCTTCTGCCATGAACGTCGAGTGTGCACATAGAGTGGCGGTTCCTCCGCCGCAGCCATTTGTCAAGTCTTTGAAGAACTCACTGAAAGAAACCTTTTTCCCCGACGACCCACTCAGACAGTTCAAAAACCAGCCTGTTTCGAGAAAATTACTTCTGGGTTTTCAGTATTTCTTTCCGATTCTCGAGTGGGCTCCGCGTTACACTTTCGACTTCTTCAAAGCTGATCTCATTTCTGGAATCACCATTGCCAGCCTTGCCATTCCTCAGGGCATAAGCTACGCCAAGCTAGCCAACTTACCGCCTATTCTCGGCCTATATTCGAGTTTTATTCCTCCTTTGGTGTATGCAATGATGGGTAGTTCGAGAGATTTAGCAGTTGGAACAGTGGCTGTTGCTTCTCTCCTCATAGCTTCCATGCTTGGACGTGAGGTTAATGCTATGGAGAATCCCAAGCTTTACCTCCATCTTGCTTTAACATCAACGTTTTTCTCAGGAGTTTTCCAGGCTTCATTGGGTTTATTAAGGCTAGGTTTTATAGTGGATTTTCTGTCACACGCGACGATAGTAGGGTTCATGGCAGGAGCAGCAACAGTTGTTTGCCTGCAACAGCTGAAAGGAGTTCTTGGGCTTGTACATTTCACCCATGGCACTGACCTTGTCTCTGTTATGCGTTCTGTCTTCTCCCAAGTTCATCAGTGGAGATGGGAAAGCGGCGTTCTGGGCTGCGGCTTCCTGTTCTTCCTCATCAGCACAAGATACTTAAGCAAGAAAAGGCCAAGATTCTTCTGGATATCGGCCATGGCTCCTCTGACGTCGGTGATCTTGGGAAGCCTCCTCGTCTACCTCACCCATGCAGAGAAACATGGAGTTCAAGTGATAGGGAACCTCAAGAAAGGGCTGAATCCACCGTCCGTCACGGATCTCATTTTCACTGGGCCTTATCTGACGATTGTGATTAAAACTGGAATCATCACTGGCGTCATTGCTCTAGCTGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTTCAAAAACTACAACATCGATGGGAACAAAGAGATGGTCGCCATTGGAACTATGAACATCGTTGGTTCCTTCACCTCTTGTTACCTCGCAACAGGCCCGTTTTCAAGGTCGGCGGTGAACTACAACGCCGGATGCAAGACGGCGGTTTCTAACATTGTAATGGCGATCGCGGTGATGTTTACGTTGTTGTTTTTAACGCCATTGTTCCATTATACTCCTCTGGTGGTTCTGTCCGCCATTATCATCTCTGCGATGCTGGGTCTCATCGATTATGAGGCCGCTATTCATCTCTGGAAAGTCGATAAGTTTGATTTCCTAGTTTGTATTGGTGCTTATCTTGGAGTAGTCTTTGGAAGCGTAGAAATGGGCTTGGTTATTGCGGTTTTCCTGTCTGTGCTTAGAGTATTACTTTTCATTGCCAGGCCAAGAACTCGTGTTCTTGGTAATATTCCCAATTCCATGATTTTCAGAAACGTTGAACAATATCCTAATTTAAGCAATGTTCCTGGAGTTCTTATCCTTGAAATTGATGCTCCAATTTACTTTGCAAATTCAAGCTACTTAAGAGAAAGGATTACAAGGTGGATCGATGAAGAAGAAGACAGGATAAAATCTTCCGGAGAAATTAGTTTGCAGTACGTTGTATTAGATATGAGCGCTGTTGGTAATATTGATACGAGTGGAATAAGCATGATGGAAGAGGTCAAGAAGTTTATTGATAGAAGAGGGATTAAGCTTGTTTTGGCCAATCCTGGAGGAGAGGTCATGAAGAAGCTCAACAAATCAAAGTTCTTAGACAACATAGGTCAAGAATGGATCTACCTCACTGTGGGGGAAGCCGTAGCAGCCTGCAATTACATGCTTCACACTTGCAAGCCGAATTCCGAGAAAGGCGAAGCCGAGGTCTGGAATAGCGTCTAA 1971 45.0 MGNSDFVYSSAMNVECAHRVAVPPPQPFVKSLKNSLKETFFPDDPLRQFKNQPVSRKLLLGFQYFFPILEWAPRYTFDFFKADLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLVYAMMGSSRDLAVGTVAVASLLIASMLGREVNAMENPKLYLHLALTSTFFSGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGVLGLVHFTHGTDLVSVMRSVFSQVHQWRWESGVLGCGFLFFLISTRYLSKKRPRFFWISAMAPLTSVILGSLLVYLTHAEKHGVQVIGNLKKGLNPPSVTDLIFTGPYLTIVIKTGIITGVIALAEGIAVGRSFAMFKNYNIDGNKEMVAIGTMNIVGSFTSCYLATGPFSRSAVNYNAGCKTAVSNIVMAIAVMFTLLFLTPLFHYTPLVVLSAIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYLGVVFGSVEMGLVIAVFLSVLRVLLFIARPRTRVLGNIPNSMIFRNVEQYPNLSNVPGVLILEIDAPIYFANSSYLRERITRWIDEEEDRIKSSGEISLQYVVLDMSAVGNIDTSGISMMEEVKKFIDRRGIKLVLANPGGEVMKKLNKSKFLDNIGQEWIYLTVGEAVAACNYMLHTCKPNSEKGEAEVWNSV 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 7974865 7980181 + Bma013618.1 Bma15g00623 96745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00623 656 Pfam STAS domain 512 630 IPR002645 -
Bma15g00623 656 SUPERFAMILY SpoIIaa-like 513 634 IPR036513 -
Bma15g00623 656 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma15g00623 656 Pfam Sulfate permease family 80 459 IPR011547 GO:0016021
Bma15g00623 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Bma15g00623 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 652 - -
Bma15g00623 656 Gene3D STAS domain 491 636 IPR036513 -
Bma15g00623 656 PANTHER SULFATE TRANSPORTER 2 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma15g00623 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Bma15g00623 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01775 Bma-Chr1:60482558 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma04g00769 Bma-Chr4:8332668 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma04g00771 Bma-Chr4:8406830 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma05g01398 Bma-Chr5:53381935 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma07g00479 Bma-Chr7:5799909 Bma15g00623 Bma-Chr15:7974865 1.57E-10 dispersed
Bma13g00014 Bma-Chr13:285982 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma15g00030 Bma-Chr15:327736 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma15g00384 Bma-Chr15:4273098 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma15g01025 Bma-Chr15:40744562 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma15g00623 Bma-Chr15:7974865 Bma01g02625 Bma-Chr1:83812419 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00623 K17471 - qsu:112027234 1131.7