Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00629 ATGGTGGTTGCAAATTTGTCAACTATATATCCTATAGATTTGGAAGCTCCCGAAGGTGGAGTTGATGACATGACTAAGCTATCATATTTACACGAGCCAGGAGTGTTGCATAATTTGGCTGTTAGATATGAGTTGAATGAAATTTATACTTATTCAGGAAACATTCTCATTGCCCTCAATCCATTCCAAAGTCTACCATATTTGTATAATTCTTATGTGATGGAGCAGTACAAGGGCGCAACATCTGGAGAACTGAGTCCTCATGTCTTTGCTATTGCTGATGTCGCATATAGGTCAATGATTAATGACGGGAAAAGCATCTCTATTCTAGTCAGTGGAGAAAGTGGAGCTGGAAAGACTGAAACTACCAAAATGCTTATGCGTTACCTTGCCTTTTTAGGTGGGAGAGCGGCAGCTGAAGGACGTACGGTTGAACAACAAGTTCTAGAATCAAATCCAGTTCTTGAAGCATTTGGCAACGCAAAAACAGTCAGAAATAGTAATTCAAGTCGTTTTGGAAAATTTGTTGAGATTCAGTTTGATAAAAATGGAAGAATATCAGGAGCTGCTATTAGAACTTATCTTCTTGAAAGATCTCGTGTTTGCCAAATATCGGATCCGGAAAGAAATTATCATTGCTTTTACCTTCTCTGCGCAGCACCACCTCAGGAGAGAGAGAAATACAAGTTAGGAAATCATAAATCATTTCACTACCTAAACCAATCAAGTTGTTATGAATTACCTGGTGTAAATGATGCTCATGATTATCTTGCCACAAAGAGAGCCATGGATATAGTTGGAATAGGTGAAAGAGAACAGGATGCGATTTTTAAAGTTGTGGCTGCAATTCTACATCTCGGTAACGTTGATTTTGCAAAGAGAGATGAAAGTGATTCAGCAGTTCTCAAGGATGAGGAATCAAACTTCCACCTTCATGTGGCAGCAGAACTTCTTGTGTGTGATCCTTATGCATTGGAAGAGGCATTGTGCAAGCGTCAAATGATAACTCCTGAGGAAATTATCATGAGAAGTCTCGATCCAGTTGGTGCGACAGTCAGCAGGGACAGCTTAGCGAAAACAATATATTCCCGTTTGTTTGATTGGTTGGTGGATAAAATCAACATCTCCATTGGGCAAGACCCTGGCTCAAATTGTCTGATTGGGGTCCTAGACATATATGGGTTTGAAAGCTTTAATACAAATAGCTTTGAGCAGTTCTGCATTAATTTAACAAACGAAAAGCTGCAACAACATTTCAACCAGCATGTATTCAAGATGGAACAAGAAGAATATACAAAAGAGGGTATTGATTGGAGTTACATAGAATTCATTGATAATCAAGATGTTCTAGATCTCATTGAGAAGAAACCAGGCGGAATAATTTCTCTGCTTGACGAGGCTTGTATGTTTCCAAAGTCAAATCATGAAACTTTTTCACAAAAACTTTACCAGACATTTAAGAACCACAAGCGTTTCTTGAAGCCAAAGTTGGCGCGCACAGACTTCACCATTGTTCATTATGCAGGAGATGTTCAATATCAGTCTGACCAATTTTTAGATAAAAACAAAGATTATGTTGTTCCCGAGCATCAAAATTTATTGAGTGCTTCAAAATGTCCTTTTGTGGCATCTCTTTTCCCTCCACTGACTGAGGAGTCAGCCAAATCATCAAAATTTTCTTCAATTGGATCCCGTTTTAAACTACAACTACATCAATTGATGGATACGCTAAAGGCAACCGAACCACATTACATTAGATGTGTAAAGCCAAATAATTTCTTAAAACCTGCCGTATTTGAGAATGCTGATGTCATTCAGCAGCTACGTTCGGGTGGTGTTCTAGAGGCTGTTAGAATCAAATGCGCAGGATATCCGACATGCAGGACTTTCTTTGAATTTTTAATTCGTTTTGGAATCCTTGCTCCAGAGATATTGGAAGGGGACTTTGAAGAAAAGACTGCATGTGAAATGATTCTGGAGAAGGTGGGAGTAAAAGGTTATCAGATCGGAAAATCTAAAGTCTTCTTAAGAGCTGGTCAGATGGCTGAGCTAGATGCACAGAGAGCAAAATATCTGGCCTTATCAGCTAAAATAATTCAAAAGCAGATTAGATCATGTCTTGTTCGTAAGAAGTTCATTGCTATGCGGAAGGCTTCTATTCGTATACAATCATATTGGAGAGGTGTTTTGGCTCGTGAAATATACGAGATATTGAGAAGGGAGAAAGCTGCTGTCAAAATACAGAAAAATATTCGAAGACAACTTGCAAGAGAAGCATACCTAAAAATTACATTCTCTGTAGTTTTGTTTCAGTCGGCCTTACGTGCGATGGCTGCTCGTGATAAATTTAAATTTAGAAGGAAAAACAGGGCAGCAACTGTTATTCAGGCCCATTGGCGATGTCATAGGACCTTTTCCGACTACAAAAAACTGAAGAAAGCATCAACCATTTCACAATGCAGATGGAGGGCGAAAACTGCTGCTGAGGGGCAAGGAAAGATGGTAAACAACTTAGAAGAAAGAAAAGAAGTGAAAGAAGAAGAAGCACTGCCACATTGTTTGCATAACATGCAAAGTGAAACAGATGAAATGATTGAAGTGATTGTCAAGGAGTGCCAAATTTCTCAGAAAGAAGAAGAAGCGCATTTTATCATTAAAGAGCCCGTAAGTCCTGACAAGGACAGCAAAAAGGTTGAGACTCTCAGGACTGAAGTGTCTAATTTAAAGGCCTTGCTTTTGAAAGAAAGACGAAGAGCCAATGAATGGGAAAGGAAATATGTCTCAGCGCAGGAAAAAAGTGAGGAAAGACGGGAAAAATTAGAAGAGACTGAAGAAAGGGTTCATCAACTTCAAGACTCTATAAATAGTATGTTTCAGGATGATATATTGCATGTCAAACCAAATTTCAGAGCTGAAAATGATCATGCATCCGTCATCAGATTTGAATGCTATTTGCAGACCCATTGCCAAGGATGTGTGCATTGA 2985 38.93 MVVANLSTIYPIDLEAPEGGVDDMTKLSYLHEPGVLHNLAVRYELNEIYTYSGNILIALNPFQSLPYLYNSYVMEQYKGATSGELSPHVFAIADVAYRSMINDGKSISILVSGESGAGKTETTKMLMRYLAFLGGRAAAEGRTVEQQVLESNPVLEAFGNAKTVRNSNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQEREKYKLGNHKSFHYLNQSSCYELPGVNDAHDYLATKRAMDIVGIGEREQDAIFKVVAAILHLGNVDFAKRDESDSAVLKDEESNFHLHVAAELLVCDPYALEEALCKRQMITPEEIIMRSLDPVGATVSRDSLAKTIYSRLFDWLVDKINISIGQDPGSNCLIGVLDIYGFESFNTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEGIDWSYIEFIDNQDVLDLIEKKPGGIISLLDEACMFPKSNHETFSQKLYQTFKNHKRFLKPKLARTDFTIVHYAGDVQYQSDQFLDKNKDYVVPEHQNLLSASKCPFVASLFPPLTEESAKSSKFSSIGSRFKLQLHQLMDTLKATEPHYIRCVKPNNFLKPAVFENADVIQQLRSGGVLEAVRIKCAGYPTCRTFFEFLIRFGILAPEILEGDFEEKTACEMILEKVGVKGYQIGKSKVFLRAGQMAELDAQRAKYLALSAKIIQKQIRSCLVRKKFIAMRKASIRIQSYWRGVLAREIYEILRREKAAVKIQKNIRRQLAREAYLKITFSVVLFQSALRAMAARDKFKFRRKNRAATVIQAHWRCHRTFSDYKKLKKASTISQCRWRAKTAAEGQGKMVNNLEERKEVKEEEALPHCLHNMQSETDEMIEVIVKECQISQKEEEAHFIIKEPVSPDKDSKKVETLRTEVSNLKALLLKERRRANEWERKYVSAQEKSEERREKLEETEERVHQLQDSINSMFQDDILHVKPNFRAENDHASVIRFECYLQTHCQGCVH 994
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8707061 8718973 + Bma013627.2 Bma15g00629 96751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00629 994 Pfam Myosin head (motor domain) 21 677 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma15g00629 994 Gene3D - 209 267 - -
Bma15g00629 994 Gene3D - 396 580 - -
Bma15g00629 994 SMART iq_5 714 736 IPR000048 GO:0005515
Bma15g00629 994 SMART iq_5 787 809 IPR000048 GO:0005515
Bma15g00629 994 SMART iq_5 691 713 IPR000048 GO:0005515
Bma15g00629 994 SMART iq_5 739 761 IPR000048 GO:0005515
Bma15g00629 994 SMART iq_5 762 784 IPR000048 GO:0005515
Bma15g00629 994 Gene3D - 743 789 - -
Bma15g00629 994 Gene3D - 692 742 - -
Bma15g00629 994 Gene3D - 790 839 - -
Bma15g00629 994 Coils Coil 898 960 - -
Bma15g00629 994 Gene3D - 624 690 - -
Bma15g00629 994 Gene3D Kinesin motor domain 22 619 IPR036961 -
Bma15g00629 994 ProSiteProfiles IQ motif profile. 715 744 IPR000048 GO:0005515
Bma15g00629 994 Gene3D Myosin VI head, motor domain, U50 subdomain 268 558 - -
Bma15g00629 994 Coils Coil 828 848 - -
Bma15g00629 994 Pfam IQ calmodulin-binding motif 790 809 IPR000048 GO:0005515
Bma15g00629 994 Pfam IQ calmodulin-binding motif 695 712 IPR000048 GO:0005515
Bma15g00629 994 Pfam IQ calmodulin-binding motif 741 760 IPR000048 GO:0005515
Bma15g00629 994 Pfam IQ calmodulin-binding motif 716 735 IPR000048 GO:0005515
Bma15g00629 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 740 IPR027417 -
Bma15g00629 994 ProSiteProfiles IQ motif profile. 766 792 IPR000048 GO:0005515
Bma15g00629 994 ProSiteProfiles IQ motif profile. 740 764 IPR000048 GO:0005515
Bma15g00629 994 ProSiteProfiles Myosin motor domain profile. 19 689 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma15g00629 994 SMART MYSc_2a 13 690 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma15g00629 994 PRINTS Myosin heavy chain signature 153 180 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma15g00629 994 PRINTS Myosin heavy chain signature 386 414 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma15g00629 994 PRINTS Myosin heavy chain signature 439 467 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma15g00629 994 PRINTS Myosin heavy chain signature 106 131 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma15g00629 994 PRINTS Myosin heavy chain signature 49 68 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma15g00629 994 PANTHER MYOSIN 1 966 - -
Bma15g00629 994 CDD MYSc_Myo11 33 677 IPR036018 -
Bma15g00629 994 ProSiteProfiles IQ motif profile. 788 816 IPR000048 GO:0005515
Bma15g00629 994 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 1 966 - -
Bma15g00629 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 741 827 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00629 Bma-Chr15:8707061 Bma15g00717 Bma-Chr15:13235584 0 dispersed
Bma15g00629 Bma-Chr15:8707061 Bma09g00523 Bma-Chr9:41799897 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00629 K10357 - csv:101220626 1390.17