Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma15g00648 | ATGGACAATGAACTTTTTTTCAACGGACACCCACCGCCGTCCCCCATGACGTTTGAGTCAACTTCTAAAATGCCCGTTTGGCACCAGCTAGCTCCGCCGCCCGATTGCTCGCAGGAGAAATCCTTGGACTTCCTTTTCGATCCTTTCTCATCTGTCGTACCGTCGCCGGAGGCGTCCAATTCTCACGTTTCCGGCGAAGGGTTTAAGATTAGGGAGCTGATAGGGAAGCTCGGAGAATTTCCTAGTTACAACACTACTCCACTGAGCTCACCTCCGAAGCTTCATTCTCCAATAATGGCGGCGAATTCTAATGTAACGGAATTCTCAGGTGATCCTGGATTTGCAGAGAGGGCGGCGAGGTTTTCTTGCTTCGGAAGTAAGAGTTTCAATGGTCGAATCAGTCAGTTTCCTTCTTATAGACCTACTCCATCAATGGCGGACGGAAAGCTTTCTCGAGTTTCAAGCAGCCCCTCTCTCAAAGCATTTGGATCGAACTCTTCGTTGGAATCCACGGTTTCAGAGCAAATCTCAAACGAGTTAAATTGCAGGAAAAGAAAAGCGAATTCAAAGGGAAAACCGAAAGAACCCATTCAGTTTGACGAGAATTCAAATGGTAAGCGGAGCAAAGTGAGCGAAGAGAAGAGGTGTGGAAATGTCGGCGGGAAAACAGAGGAAGAAGACACTGGAAAAAGTTGCAGAAACGAAGAGAAACCAAGCAAGACGAAGAGCAACTCTAAACCTCCAGAGCCTCCAAAAGACTACATCCATGTGAGAGCCAGAAGAGGCCAAGCCACTGACAGCCATAGCCTTGCAGAAAGAGTAAGAAGAGAGAAGATAAGCGAAAGAATGAAGCTTCTTCAAGACCTCGTTCCAGGCTGCAACAAAGTCACCGGAAAATCGCTAATGCTCGACGAAATCATAAACTATGTTCAGTCATTACAGCGTCAAGTTCAGTTCCTTTCCATGAAGTTGGCTTCTGTCAACACCCGGACGGATTCCGCCATGGATTCTCTGATCTCCAAAGAAGTAAGTTTAAATTCTCGAATTGGGTATTCGAGATTTTTATGA | 1068 | 46.44 | MDNELFFNGHPPPSPMTFESTSKMPVWHQLAPPPDCSQEKSLDFLFDPFSSVVPSPEASNSHVSGEGFKIRELIGKLGEFPSYNTTPLSSPPKLHSPIMAANSNVTEFSGDPGFAERAARFSCFGSKSFNGRISQFPSYRPTPSMADGKLSRVSSSPSLKAFGSNSSLESTVSEQISNELNCRKRKANSKGKPKEPIQFDENSNGKRSKVSEEKRCGNVGGKTEEEDTGKSCRNEEKPSKTKSNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKSLMLDEIINYVQSLQRQVQFLSMKLASVNTRTDSAMDSLISKEVSLNSRIGYSRFL | 355 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 9352134 | 9353460 | + | Bma013650.1 | Bma15g00648 | 96770 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma15g00648 | 355 | CDD | bHLH_AtBPE_like | 253 | 338 | - | - | |
Bma15g00648 | 355 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 261 | 330 | IPR036638 | GO:0046983 | |
Bma15g00648 | 355 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 92 | 343 | IPR024097 | GO:0006355 | |
Bma15g00648 | 355 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 33 | 85 | IPR024097 | GO:0006355 | |
Bma15g00648 | 355 | SMART | finulus | 269 | 319 | IPR011598 | GO:0046983 | |
Bma15g00648 | 355 | MobiDBLite | consensus disorder prediction | 135 | 254 | - | - | |
Bma15g00648 | 355 | Gene3D | - | 260 | 336 | IPR036638 | GO:0046983 | |
Bma15g00648 | 355 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 263 | 313 | IPR011598 | GO:0046983 | |
Bma15g00648 | 355 | MobiDBLite | consensus disorder prediction | 179 | 254 | - | - | |
Bma15g00648 | 355 | MobiDBLite | consensus disorder prediction | 148 | 178 | - | - | |
Bma15g00648 | 355 | PANTHER | - | 92 | 343 | - | - | |
Bma15g00648 | 355 | PANTHER | - | 33 | 85 | - | - | |
Bma15g00648 | 355 | Pfam | Helix-loop-helix DNA-binding domain | 267 | 314 | IPR011598 | GO:0046983 | |
Bma15g00648 | 355 | Coils | Coil | 310 | 330 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00989 | Bma-Chr4:15919755 | Bma15g00648 | Bma-Chr15:9352134 | 3.02E-62 | dispersed | |
Bma10g00270 | Bma-Chr10:2454758 | Bma15g00648 | Bma-Chr15:9352134 | 3.01E-46 | dispersed | |
Bma12g00509 | Bma-Chr12:16505688 | Bma15g00648 | Bma-Chr15:9352134 | 6.18E-46 | dispersed | |
Bma14g01254 | Bma-Chr14:20440056 | Bma15g00648 | Bma-Chr15:9352134 | 3.82E-22 | dispersed | |
Bma14g01759 | Bma-Chr14:37842115 | Bma15g00648 | Bma-Chr15:9352134 | 1.44E-48 | dispersed | |
Bma14g01772 | Bma-Chr14:38098924 | Bma15g00648 | Bma-Chr15:9352134 | 1.26E-48 | dispersed | |
Bma15g00648 | Bma-Chr15:9352134 | Bma09g00586 | Bma-Chr9:42986767 | 4.33E-175 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58501 | PF00010 | HLH | 4.50E-06 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma15g00648 | - | - | hbr:110652595 | 351.673 |