Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma15g00650 | ATGGATGAGGACTTTGATATTCCGGCGGCTGAGGAGATGAACGAGGATTTTGATTTTGCGGGCGAGAATCCTAGTCTTAAGGTTGGGGAAGAGAAGGAGATCGGAAATCAAGGGTTGAAGAAGAAGCTTCTTAAGGAAGGTGGAGGCTGGGATACTCCTGATAATGGCGACGAGGTTGAAGTTCATTACACCGGAACTTTGCTTGATGGGACTAAGTTTGACTCAAGTCGCGATCGAGATACAACCTTCAAATTCACTCTTGGGCAAGGTCAAGTGATCAAAGGATGGGACCTGGGAATCAAAACAATGAAGAAAAGTGAAAATGCTCTTTTCACCATTCCACCTGATCTAGCTTATGGAGCATCTGGATCCTCTCCAACTATTCCACCAAACGCTACACTTCAATTCGATGTTGAGTTGATATCCTGGACTAGTGTTAAGGACATATGCAAGGATGGTGGAATTTTCAAGAAAATTATTGTCCAAGGGGAGAATTGGGAGAACCCAAAAGACCCAGACGAAGTTCTCGTTAAGTTTGAAGCTCAGCTCGATGGTAGTGCAGTTGTTGCCAAGTCTGATGGAGTAGAGTTTACTGTTGGAGACGGATATTTTTGCCCTGCTTTATCAAAGGCTGTCAAAACAATGAAGAAGGGTGAGAAGGTCCTTCTGACGGTGAAGCCGCAATATGGGTTTGGGGAGAAAGGTAAGCCAGCCTCTGGTGGTGAGGGTGCTGTTCCACCAAATGCAACTCTTCAGATCACTCTGGAGTTGTTATCATGGAAAATCGTCTCAGAAGTTACGAATGACAGAAAGGTCATCAAGAAAATTCTTAAGGAAGGAGAGGGGTACGAGCGTCCAAGTGATGGATCTGTCGTAAAAATAAAGGTGATCGGGAAGCTGCACGATGGTACAATATTTATGAAGAAGGGCCATTGCGATGGGGAGGAGCTCTATGAATTTAAGACCGATGACGAGCAAGTAATTGATGGGCTTGATAGAGCTGTAATGACGATGAAAAAGGGGGAGGTGGCATTGTTGACTATTGCTCCCGAGTATGCACATGGTTCATCAGAGTCGTCACAGGAGTTAGCCATTGTTCCTCCCAACTCAACTGTGTTCTTTGAGGTTGAACTCGTCTCTTTTGTCAAGGAGAAGGAATCGTGGGACATGAATACGCAGGAGAAGATTGAAGCTGCTGGTAAGAAGAAGGAAGAAGGAAATGTTTTGTTTAAGGCTGGAAAATATGCCAGAGCTGCCAAGAGATACGAAAAAGCTGTGAAGTATATCGAGTTCGATTCTTCTTTCAGCGAGGAGGAAAAGAAGCAGGCCAAAGCACTGAAGGCGGCTTGCAGTCTGAACGATGCTGCTTGCAAGTTGAAGCTGAAATTGTTCAAGGAGGCAGAAAAATTGTGTACCAAGGTGTTAGAAGCTGAAAGTGGGAATGTGAAGGCCCTCTACAGAAGGGCACAGGCTTACATTCAAATGGCAGACTTAGACTTGGCAGAGGTTGATATTAAAAAGGCCTTGGAGATTGACCCGGACAATAGGGAAGTTAAACTAGAGTATAGAACTTTGAAGGAGAAGATGAAGGAATTGGACAAGAAGGAAGCTAAATTTTATGGCAACATGTTTGCCAAGATGAACAAGTTAGAGGCCCTTGATTCTAAAGTAAGTGTTATTCGAGGCCAATAA | 1692 | 44.27 | MDEDFDIPAAEEMNEDFDFAGENPSLKVGEEKEIGNQGLKKKLLKEGGGWDTPDNGDEVEVHYTGTLLDGTKFDSSRDRDTTFKFTLGQGQVIKGWDLGIKTMKKSENALFTIPPDLAYGASGSSPTIPPNATLQFDVELISWTSVKDICKDGGIFKKIIVQGENWENPKDPDEVLVKFEAQLDGSAVVAKSDGVEFTVGDGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGEKGKPASGGEGAVPPNATLQITLELLSWKIVSEVTNDRKVIKKILKEGEGYERPSDGSVVKIKVIGKLHDGTIFMKKGHCDGEELYEFKTDDEQVIDGLDRAVMTMKKGEVALLTIAPEYAHGSSESSQELAIVPPNSTVFFEVELVSFVKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYARAAKRYEKAVKYIEFDSSFSEEEKKQAKALKAACSLNDAACKLKLKLFKEAEKLCTKVLEAESGNVKALYRRAQAYIQMADLDLAEVDIKKALEIDPDNREVKLEYRTLKEKMKELDKKEAKFYGNMFAKMNKLEALDSKVSVIRGQ | 563 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 9407932 | 9411600 | - | Bma013652.1 | Bma15g00650 | 96772 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma15g00650 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 52 | 141 | IPR001179 | GO:0003755 | |
| Bma15g00650 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 167 | 258 | IPR001179 | GO:0003755 | |
| Bma15g00650 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 283 | 379 | IPR001179 | GO:0003755 | |
| Bma15g00650 | 563 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 267 | - | - | |
| Bma15g00650 | 563 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 381 | 552 | - | - | |
| Bma15g00650 | 563 | Pfam | Tetratricopeptide repeat | 482 | 515 | IPR001440 | GO:0005515 | |
| Bma15g00650 | 563 | ProSiteProfiles | TPR repeat profile. | 482 | 515 | IPR019734 | GO:0005515 | |
| Bma15g00650 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 172 | 261 | IPR001179 | GO:0003755 | |
| Bma15g00650 | 563 | SUPERFAMILY | TPR-like | 387 | 548 | IPR011990 | GO:0005515 | |
| Bma15g00650 | 563 | Gene3D | - | 262 | 384 | IPR046357 | GO:0003755 | |
| Bma15g00650 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 56 | 144 | IPR001179 | GO:0003755 | |
| Bma15g00650 | 563 | SUPERFAMILY | FKBP-like | 148 | 260 | - | - | |
| Bma15g00650 | 563 | Gene3D | - | 146 | 261 | IPR046357 | GO:0003755 | |
| Bma15g00650 | 563 | Gene3D | Tetratricopeptide repeat domain | 385 | 542 | IPR011990 | GO:0005515 | |
| Bma15g00650 | 563 | SUPERFAMILY | FKBP-like | 265 | 399 | - | - | |
| Bma15g00650 | 563 | SMART | tpr_5 | 399 | 432 | IPR019734 | GO:0005515 | |
| Bma15g00650 | 563 | SMART | tpr_5 | 482 | 515 | IPR019734 | GO:0005515 | |
| Bma15g00650 | 563 | SMART | tpr_5 | 448 | 481 | IPR019734 | GO:0005515 | |
| Bma15g00650 | 563 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 269 | 381 | - | - | |
| Bma15g00650 | 563 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 267 | - | - | |
| Bma15g00650 | 563 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 381 | 552 | - | - | |
| Bma15g00650 | 563 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 269 | 381 | - | - | |
| Bma15g00650 | 563 | Gene3D | - | 9 | 145 | IPR046357 | GO:0003755 | |
| Bma15g00650 | 563 | SUPERFAMILY | FKBP-like | 33 | 151 | - | - | |
| Bma15g00650 | 563 | Coils | Coil | 561 | 563 | - | - | |
| Bma15g00650 | 563 | Coils | Coil | 515 | 535 | - | - | |
| Bma15g00650 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 289 | 382 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma04g00694 | Bma-Chr4:7031982 | Bma15g00650 | Bma-Chr15:9407932 | 1.05E-48 | dispersed | |
| Bma09g00584 | Bma-Chr9:42927416 | Bma15g00650 | Bma-Chr15:9407932 | 0 | dispersed | |
| Bma15g00650 | Bma-Chr15:9407932 | Bma08g00849 | Bma-Chr8:46500040 | 2.25E-37 | dispersed | |
| Bma15g01007 | Bma-Chr15:39265554 | Bma15g00650 | Bma-Chr15:9407932 | 8.50E-14 | dispersed | |
| Bma15g01012 | Bma-Chr15:39777137 | Bma15g00650 | Bma-Chr15:9407932 | 3.43E-14 | dispersed | |
| Bma01g01567 | Bma-Chr1:37093734 | Bma15g00650 | Bma-Chr15:9407932 | 4.09E-10 | transposed | |
| Bma08g01112 | Bma-Chr8:50079267 | Bma15g00650 | Bma-Chr15:9407932 | 1.07E-10 | transposed | |
| Bma10g00065 | Bma-Chr10:611968 | Bma15g00650 | Bma-Chr15:9407932 | 8.99E-12 | transposed | |
| Bma11g00259 | Bma-Chr11:2277399 | Bma15g00650 | Bma-Chr15:9407932 | 6.46E-07 | transposed | |
| Bma12g00350 | Bma-Chr12:5877918 | Bma15g00650 | Bma-Chr15:9407932 | 1.00E-08 | transposed | |
| Bma14g00281 | Bma-Chr14:3545111 | Bma15g00650 | Bma-Chr15:9407932 | 2.69E-08 | transposed | |
| Bma15g00684 | Bma-Chr15:11413078 | Bma15g00650 | Bma-Chr15:9407932 | 1.59E-12 | transposed | |
| Bma15g00650 | Bma-Chr15:9407932 | Bma09g00583 | Bma-Chr9:42923024 | 4.54E-22 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma15g00650 | K09571 | - | zju:107426533 | 879.011 |