Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00650 ATGGATGAGGACTTTGATATTCCGGCGGCTGAGGAGATGAACGAGGATTTTGATTTTGCGGGCGAGAATCCTAGTCTTAAGGTTGGGGAAGAGAAGGAGATCGGAAATCAAGGGTTGAAGAAGAAGCTTCTTAAGGAAGGTGGAGGCTGGGATACTCCTGATAATGGCGACGAGGTTGAAGTTCATTACACCGGAACTTTGCTTGATGGGACTAAGTTTGACTCAAGTCGCGATCGAGATACAACCTTCAAATTCACTCTTGGGCAAGGTCAAGTGATCAAAGGATGGGACCTGGGAATCAAAACAATGAAGAAAAGTGAAAATGCTCTTTTCACCATTCCACCTGATCTAGCTTATGGAGCATCTGGATCCTCTCCAACTATTCCACCAAACGCTACACTTCAATTCGATGTTGAGTTGATATCCTGGACTAGTGTTAAGGACATATGCAAGGATGGTGGAATTTTCAAGAAAATTATTGTCCAAGGGGAGAATTGGGAGAACCCAAAAGACCCAGACGAAGTTCTCGTTAAGTTTGAAGCTCAGCTCGATGGTAGTGCAGTTGTTGCCAAGTCTGATGGAGTAGAGTTTACTGTTGGAGACGGATATTTTTGCCCTGCTTTATCAAAGGCTGTCAAAACAATGAAGAAGGGTGAGAAGGTCCTTCTGACGGTGAAGCCGCAATATGGGTTTGGGGAGAAAGGTAAGCCAGCCTCTGGTGGTGAGGGTGCTGTTCCACCAAATGCAACTCTTCAGATCACTCTGGAGTTGTTATCATGGAAAATCGTCTCAGAAGTTACGAATGACAGAAAGGTCATCAAGAAAATTCTTAAGGAAGGAGAGGGGTACGAGCGTCCAAGTGATGGATCTGTCGTAAAAATAAAGGTGATCGGGAAGCTGCACGATGGTACAATATTTATGAAGAAGGGCCATTGCGATGGGGAGGAGCTCTATGAATTTAAGACCGATGACGAGCAAGTAATTGATGGGCTTGATAGAGCTGTAATGACGATGAAAAAGGGGGAGGTGGCATTGTTGACTATTGCTCCCGAGTATGCACATGGTTCATCAGAGTCGTCACAGGAGTTAGCCATTGTTCCTCCCAACTCAACTGTGTTCTTTGAGGTTGAACTCGTCTCTTTTGTCAAGGAGAAGGAATCGTGGGACATGAATACGCAGGAGAAGATTGAAGCTGCTGGTAAGAAGAAGGAAGAAGGAAATGTTTTGTTTAAGGCTGGAAAATATGCCAGAGCTGCCAAGAGATACGAAAAAGCTGTGAAGTATATCGAGTTCGATTCTTCTTTCAGCGAGGAGGAAAAGAAGCAGGCCAAAGCACTGAAGGCGGCTTGCAGTCTGAACGATGCTGCTTGCAAGTTGAAGCTGAAATTGTTCAAGGAGGCAGAAAAATTGTGTACCAAGGTGTTAGAAGCTGAAAGTGGGAATGTGAAGGCCCTCTACAGAAGGGCACAGGCTTACATTCAAATGGCAGACTTAGACTTGGCAGAGGTTGATATTAAAAAGGCCTTGGAGATTGACCCGGACAATAGGGAAGTTAAACTAGAGTATAGAACTTTGAAGGAGAAGATGAAGGAATTGGACAAGAAGGAAGCTAAATTTTATGGCAACATGTTTGCCAAGATGAACAAGTTAGAGGCCCTTGATTCTAAAGTAAGTGTTATTCGAGGCCAATAA 1692 44.27 MDEDFDIPAAEEMNEDFDFAGENPSLKVGEEKEIGNQGLKKKLLKEGGGWDTPDNGDEVEVHYTGTLLDGTKFDSSRDRDTTFKFTLGQGQVIKGWDLGIKTMKKSENALFTIPPDLAYGASGSSPTIPPNATLQFDVELISWTSVKDICKDGGIFKKIIVQGENWENPKDPDEVLVKFEAQLDGSAVVAKSDGVEFTVGDGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGEKGKPASGGEGAVPPNATLQITLELLSWKIVSEVTNDRKVIKKILKEGEGYERPSDGSVVKIKVIGKLHDGTIFMKKGHCDGEELYEFKTDDEQVIDGLDRAVMTMKKGEVALLTIAPEYAHGSSESSQELAIVPPNSTVFFEVELVSFVKEKESWDMNTQEKIEAAGKKKEEGNVLFKAGKYARAAKRYEKAVKYIEFDSSFSEEEKKQAKALKAACSLNDAACKLKLKLFKEAEKLCTKVLEAESGNVKALYRRAQAYIQMADLDLAEVDIKKALEIDPDNREVKLEYRTLKEKMKELDKKEAKFYGNMFAKMNKLEALDSKVSVIRGQ 563
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 9407932 9411600 - Bma013652.1 Bma15g00650 96772
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00650 563 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 141 IPR001179 GO:0003755
Bma15g00650 563 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 258 IPR001179 GO:0003755
Bma15g00650 563 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 379 IPR001179 GO:0003755
Bma15g00650 563 PANTHER PEPTIDYLPROLYL ISOMERASE 1 267 - -
Bma15g00650 563 PANTHER PEPTIDYLPROLYL ISOMERASE 381 552 - -
Bma15g00650 563 Pfam Tetratricopeptide repeat 482 515 IPR001440 GO:0005515
Bma15g00650 563 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515
Bma15g00650 563 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Bma15g00650 563 SUPERFAMILY TPR-like 387 548 IPR011990 GO:0005515
Bma15g00650 563 Gene3D - 262 384 IPR046357 GO:0003755
Bma15g00650 563 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
Bma15g00650 563 SUPERFAMILY FKBP-like 148 260 - -
Bma15g00650 563 Gene3D - 146 261 IPR046357 GO:0003755
Bma15g00650 563 Gene3D Tetratricopeptide repeat domain 385 542 IPR011990 GO:0005515
Bma15g00650 563 SUPERFAMILY FKBP-like 265 399 - -
Bma15g00650 563 SMART tpr_5 399 432 IPR019734 GO:0005515
Bma15g00650 563 SMART tpr_5 482 515 IPR019734 GO:0005515
Bma15g00650 563 SMART tpr_5 448 481 IPR019734 GO:0005515
Bma15g00650 563 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 269 381 - -
Bma15g00650 563 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 267 - -
Bma15g00650 563 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 381 552 - -
Bma15g00650 563 PANTHER PEPTIDYLPROLYL ISOMERASE 269 381 - -
Bma15g00650 563 Gene3D - 9 145 IPR046357 GO:0003755
Bma15g00650 563 SUPERFAMILY FKBP-like 33 151 - -
Bma15g00650 563 Coils Coil 561 563 - -
Bma15g00650 563 Coils Coil 515 535 - -
Bma15g00650 563 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 382 IPR001179 GO:0003755
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00694 Bma-Chr4:7031982 Bma15g00650 Bma-Chr15:9407932 1.05E-48 dispersed
Bma09g00584 Bma-Chr9:42927416 Bma15g00650 Bma-Chr15:9407932 0 dispersed
Bma15g00650 Bma-Chr15:9407932 Bma08g00849 Bma-Chr8:46500040 2.25E-37 dispersed
Bma15g01007 Bma-Chr15:39265554 Bma15g00650 Bma-Chr15:9407932 8.50E-14 dispersed
Bma15g01012 Bma-Chr15:39777137 Bma15g00650 Bma-Chr15:9407932 3.43E-14 dispersed
Bma01g01567 Bma-Chr1:37093734 Bma15g00650 Bma-Chr15:9407932 4.09E-10 transposed
Bma08g01112 Bma-Chr8:50079267 Bma15g00650 Bma-Chr15:9407932 1.07E-10 transposed
Bma10g00065 Bma-Chr10:611968 Bma15g00650 Bma-Chr15:9407932 8.99E-12 transposed
Bma11g00259 Bma-Chr11:2277399 Bma15g00650 Bma-Chr15:9407932 6.46E-07 transposed
Bma12g00350 Bma-Chr12:5877918 Bma15g00650 Bma-Chr15:9407932 1.00E-08 transposed
Bma14g00281 Bma-Chr14:3545111 Bma15g00650 Bma-Chr15:9407932 2.69E-08 transposed
Bma15g00684 Bma-Chr15:11413078 Bma15g00650 Bma-Chr15:9407932 1.59E-12 transposed
Bma15g00650 Bma-Chr15:9407932 Bma09g00583 Bma-Chr9:42923024 4.54E-22 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00650 K09571 - zju:107426533 879.011