Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00676 ATGAACCTTCAGCAGTGTTTGTGGGGTGGCTTTGTCTTCTTCTGTATCTCCTGGGCTGTTTCTCTCTGCGATGAAGATGGTTTTTTGAGCTTATCCTGTGGTGGAACAACCATCTACGTCGATTCCTTCAACATTTCATGGCTTCCGGACTATGACTTCATATCGACGGGAAACATATCCGCCGTTGATTATGCAGAGACCACTCCTTCTTCCAGGGTTCCGATTCGTTTCTTCCCCAATCCACACTCTCGAAATTGTTACAAATTACCCCTCAAAATGGACTCGTCGTCAGTTCTCATTAGAACCAAATTTCTTTACAAAAACTACGATCGACTCCAGAAGCCGCCATTATTCTCCATTTCTCTCGGGACTGCCATTTTCAGCACAGTTGATCTCAGTGCTAACGATCCATGGACGGAAGAATTCGTCTGGCCGGTTAAAAAGGACACCGTGTCACTGTGTTTCCATGCTATTCCTGGCGGTGGGGCTCCTCTTCTTTCCTCCATTGAAGTCAGGCCGCTTCCTTATGGAGCTTACAAAGCCGGTTTGAGTTCAATTCAGTCTTTGAGGAAGAAATACAGAATCAACTGTGGTTATAATGACGGCTCCATTCGGTACCCTTTTGATCGATATGATCGGATATGGGATGCTGATACCAGATTTACGCCTTTTCATGTATCATCGGGATTTAAGGTTCATCATGTCTTCAATTCTTCCGGTCTAATGGAAAGTCCTCCTTCAGATGTTCTTCAAACTGCAAGAATTTTAGCTAGAAAGGATCTGTTAACTTACTATTTTCCTCTCGACGAAACCGGAGACTATTTCATCGTCCTATATTTTGCTGGAATTCTTCCTGTTTATCCTTCATTTGATGTGTTCATCAATGGAAAATCTCAGAAATCTAATTATTTGGTAAAAACATCAGATGTGAGTGCTCTGTATTTTACTCAGAAGGAAATCAAGAGCCTAAATATCACTCTTAAGACAGTCAAGTTCAATTCTCAGATCAACGCAATCGCAGTTTATCAGATCATCATCTTACCATCGGAAGTTTCTTCGACCACAGTTTCTGCTCTTCAGGTTATTCAGCAATCTACCGGCTTAGATCTCGGGTGGGAAGACGATCCGTGCTCTCCAAAAACATGGAATCATGTAGGATGTGAAGGAAGCCTTGTCACTGCACTAGAGCTTTCCAACATCAATTTGAGGTCCATCAATCCAACATTTAGTGACTTATTGGATCTTAAAACACTGGATTTGCACAACACATCGCTTAGGGGTGCAACAGAGAATTTGGATAGCTTACGAAATCTCGAAAAACTGAATCTGAGCTTCAACCAGCTAACATACTTTGATTCAGATTTGGGTAACCTACTCAGCCTTCAAATTCTGGACTTGAAGAACAATTCTCTAGCTGGAGTAGTTCCTGAAAGCTTAGGACAACTAGAGGATCTTCACCTATTGAATTTGGAGAATAACAAGCTTCAAGGAACTCTCCCACAGTCTCTGAATAAAGACAGTTTGGAAGTCAGAACATCTGGAAATCTTTGTCTTTCCTTCACGGAAGTGTCATGCAATGACGCCTCTTCAAACCCATCAATCGAGACCCCACTAGTAACTGTGATTCCCGCTAAGAAGCACAAAGCACTTAGTCGTCTACCGATTATTCTCGGAGCAGTTTCAGGGGCTTTTCTCGCAGTTATTACAATTTCTCTCTTCATATTCGTACAAACGAGGAAAGATAGAACTGAAATTGCTAACTCAACAAAGGCAGCCATGACACTTCGGAGCTGGAATTCAGCAAAAGTTTTTTCCTACAAAGATATCAAAGCAGCAACAAAGAACTTCAAGGAGGTGATTGGGCGAGGAAGTTTTGGATCTGTTTATCTCGGAAAGCTTACAGATGGGAGATCAGTAGCCGTGAAAGTGCGTTCAGATAAAAGCCAAATTGGCGCTGAATCATTTATCAATGAGGTGCATCTATTGTCGAGAATTCACCACCAGAATCTTGTTCGTTTGGAAGGATTTTGCCAGGAATCAAAGCAGCAAATACTAGTTTATGAGTATCTGCCTGGTGGATCCTTGGCTGACAACCTTTATGGAACCAAAAGCAACAAGATTTCTCTGAGTTGGGTCCGTAGACTCAAAATTGCTGTTGATGCTGCAAAAGGATTGGATTATTTGCATAATGGAAGTGAACCAAGAATAATACATCGTGATGTCAAGTGCAGCAACATCCTCTTCGACGTCGAAATGAATGCAAAACTCTGCGACTTTGGTTTGTCTAAGCAAGTCATCCGATCTGATGCAACACACGTTACAACCGTTGTTAAAGGAACGACCGGTTATCTCGATCCCGAATACTATTCCACTCGACAGCTGAGTGAAAAGAGTGATGTTTACAGCTTCGGAGTTGTTCTTCTGGAGCTCATCTGTGGAAGAGAACCATTGATTCATCATGGAAGTCCAGACTCCTTCAATTTGGTGTTATGGGCAAAGCCGTACTTACAGGCGGGTGCATTGGAGATTGTGGATGAGAGTTTAAGGGGAAGGTTTGATGTGGAGAGCATGAAAAAGGCAGCTTTAATTGCTGTGAAGTGTGTTGAAAGAGATGCTTCTCAGAGACCAACCATAGCTCAGGTTTTGACTCACCTCCAAGAAGCTTACACTATTCAGATTGCTACTTGTGAACGCCCCTAG 2700 42.52 MNLQQCLWGGFVFFCISWAVSLCDEDGFLSLSCGGTTIYVDSFNISWLPDYDFISTGNISAVDYAETTPSSRVPIRFFPNPHSRNCYKLPLKMDSSSVLIRTKFLYKNYDRLQKPPLFSISLGTAIFSTVDLSANDPWTEEFVWPVKKDTVSLCFHAIPGGGAPLLSSIEVRPLPYGAYKAGLSSIQSLRKKYRINCGYNDGSIRYPFDRYDRIWDADTRFTPFHVSSGFKVHHVFNSSGLMESPPSDVLQTARILARKDLLTYYFPLDETGDYFIVLYFAGILPVYPSFDVFINGKSQKSNYLVKTSDVSALYFTQKEIKSLNITLKTVKFNSQINAIAVYQIIILPSEVSSTTVSALQVIQQSTGLDLGWEDDPCSPKTWNHVGCEGSLVTALELSNINLRSINPTFSDLLDLKTLDLHNTSLRGATENLDSLRNLEKLNLSFNQLTYFDSDLGNLLSLQILDLKNNSLAGVVPESLGQLEDLHLLNLENNKLQGTLPQSLNKDSLEVRTSGNLCLSFTEVSCNDASSNPSIETPLVTVIPAKKHKALSRLPIILGAVSGAFLAVITISLFIFVQTRKDRTEIANSTKAAMTLRSWNSAKVFSYKDIKAATKNFKEVIGRGSFGSVYLGKLTDGRSVAVKVRSDKSQIGAESFINEVHLLSRIHHQNLVRLEGFCQESKQQILVYEYLPGGSLADNLYGTKSNKISLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILFDVEMNAKLCDFGLSKQVIRSDATHVTTVVKGTTGYLDPEYYSTRQLSEKSDVYSFGVVLLELICGREPLIHHGSPDSFNLVLWAKPYLQAGALEIVDESLRGRFDVESMKKAALIAVKCVERDASQRPTIAQVLTHLQEAYTIQIATCERP 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10975454 10980218 - Bma013693.1 Bma15g00676 96798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00676 899 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 894 - -
Bma15g00676 899 CDD STKc_IRAK 620 887 - -
Bma15g00676 899 SMART LRR_typ_2 482 506 IPR003591 -
Bma15g00676 899 SMART LRR_typ_2 458 481 IPR003591 -
Bma15g00676 899 SMART LRR_typ_2 435 457 IPR003591 -
Bma15g00676 899 Gene3D Transferase(Phosphotransferase) domain 1 690 896 - -
Bma15g00676 899 Pfam Malectin-like domain 31 342 IPR024788 -
Bma15g00676 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Bma15g00676 899 Gene3D Ribonuclease Inhibitor 360 527 IPR032675 -
Bma15g00676 899 Gene3D - 191 359 - -
Bma15g00676 899 SUPERFAMILY Protein kinase-like (PK-like) 594 885 IPR011009 -
Bma15g00676 899 SMART serkin_6 614 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00676 899 Gene3D Phosphorylase Kinase; domain 1 586 689 - -
Bma15g00676 899 ProSiteProfiles Protein kinase domain profile. 614 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00676 899 ProSiteProfiles Leucine-rich repeat profile. 437 459 IPR001611 GO:0005515
Bma15g00676 899 PANTHER OS07G0107800 PROTEIN-RELATED 13 894 - -
Bma15g00676 899 SUPERFAMILY L domain-like 359 505 - -
Bma15g00676 899 Pfam Protein kinase domain 617 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00676 899 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00156 Bma-Chr1:1456898 Bma15g00676 Bma-Chr15:10975454 3.81E-34 dispersed
Bma15g00250 Bma-Chr15:2494171 Bma15g00676 Bma-Chr15:10975454 5.97E-139 dispersed
Bma15g00676 Bma-Chr15:10975454 Bma09g00253 Bma-Chr9:13010364 1.79E-75 dispersed
Bma15g00676 Bma-Chr15:10975454 Bma13g01242 Bma-Chr13:45752494 3.07E-113 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66952 PF12819 Malectin_like 1.90E-51 CL0202 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00676 - - jre:108989040 1272.69