Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00679 ATGAGTTGTTTTTCTTGTTTTTCAACCCACGAGAAGAAAGCAGCTAAGAGAACAAATAGCAGAAGAAGGGGAAGATTGCCCCCTCCTATCCCTCATAAAGAACCAACTATTCCAACACAGCCACGGCCTGAAAATCCAAAATCAAGAACAGTCCCCGCAGAAAATACAGTTCAAAAATCCCCCAAAAAGGAAGAAAATACGAACAAGAAAAACATTGCTGCACAGACCTTCACTTTCAGAGAATTGGCCACAGCAACTAAAAATTTCCGGAAAGAATGTCTGATCGGCGAAGGCGGGTTTGGTCGAGTTTATAGAGGGAAACTCGAGAAAACTGGCCAGGTTGTGGCTGTAAAACAACTTGACAGAAATGGATTGCAGGGAAATAGAGAATTTCTTGTTGAAGTGTTAATGCTAAGTCTCTTACATCATCAAAATCTAGTGAATTTAATTGGATATTGTGCAGATGGAGATCAAAGGCTTTTGGTTTATGAGTACTTGTCGTTAGGATCTCTTGAAGACCATCTTCTATGTATTCCGAAAGAACAAACAGGTTTAGATTGGTTCAAAAGAATGAAAATAGCATTAGGGGCAGCAAAAGGGGTGGAGTATTTGCATGATAAAGCCAATCCACCCGTAATCTACCGCGATTTAAAGTCTTCAAACATCTTATTAGACAGTGAATTCAACGCAAAACTGTCCGACTTCGGCCTTGCCAAACTAGGTCCGATCGGGGACAAGACACACGTGTCGTCGAGGGTGATGGGAACATACGGATATTGTGCACCGGAATATCAAAGAACGGGACAACTAACCGTGAAGTCGGATGTGTATAGCTTTGGAGTTGTTTTGTTAGAATTGATCACTGGAAGAAGAGCCATTGACACAACTAGACCTTCTGAAGAGCAAAATCTGGTCACTTGGGCAAATCCAAGGTTCAAGGAACCAAGTAGATATACAGAGCTGGCGGATCCAATGCTCCAAGGAGAGTTTCCGGTGAGAGGATTGCATCAAGCGGTTGCAGTTGCAGCCATGTGTCTCTACGAGGAGCCATCGGTCCGACCGTCGATGAGCGATGTTGTTACGGCTCTCAACTTCCTAGGGACTGATATGGAATCGACTTCCAGTATGCCCTCTTCCCCATCGAACGAAATCCTAATTAAGTCAAATAAAAAATCGGACAACCAAGTTCATGATGAAAAAAATAGAAAAGAACGCCAAAAGGCAGTAGCGGAGGCGATTGAATGGGGTTCCGCTTCGAGGCACAATGCTAGATCAAGGCATGGAAGTGCTTCTTCATTATAA 1302 43.24 MSCFSCFSTHEKKAAKRTNSRRRGRLPPPIPHKEPTIPTQPRPENPKSRTVPAENTVQKSPKKEENTNKKNIAAQTFTFRELATATKNFRKECLIGEGGFGRVYRGKLEKTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYLSLGSLEDHLLCIPKEQTGLDWFKRMKIALGAAKGVEYLHDKANPPVIYRDLKSSNILLDSEFNAKLSDFGLAKLGPIGDKTHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDTTRPSEEQNLVTWANPRFKEPSRYTELADPMLQGEFPVRGLHQAVAVAAMCLYEEPSVRPSMSDVVTALNFLGTDMESTSSMPSSPSNEILIKSNKKSDNQVHDEKNRKERQKAVAEAIEWGSASRHNARSRHGSASSL 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 11162224 11164299 - Bma013696.1 Bma15g00679 96801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00679 433 MobiDBLite consensus disorder prediction 370 433 - -
Bma15g00679 433 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 2 425 - -
Bma15g00679 433 CDD STKc_IRAK 95 364 - -
Bma15g00679 433 Gene3D Phosphorylase Kinase; domain 1 58 165 - -
Bma15g00679 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Bma15g00679 433 SUPERFAMILY Protein kinase-like (PK-like) 75 387 IPR011009 -
Bma15g00679 433 MobiDBLite consensus disorder prediction 43 57 - -
Bma15g00679 433 Pfam Protein kinase domain 91 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00679 433 MobiDBLite consensus disorder prediction 390 410 - -
Bma15g00679 433 SMART serkin_6 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00679 433 Gene3D Transferase(Phosphotransferase) domain 1 166 391 - -
Bma15g00679 433 MobiDBLite consensus disorder prediction 370 389 - -
Bma15g00679 433 PANTHER OS07G0668900 PROTEIN 2 425 - -
Bma15g00679 433 MobiDBLite consensus disorder prediction 1 71 - -
Bma15g00679 433 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Bma15g00679 433 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01204 Bma-Chr1:13833637 Bma15g00679 Bma-Chr15:11162224 3.53E-178 dispersed
Bma06g00630 Bma-Chr6:33471897 Bma15g00679 Bma-Chr15:11162224 3.10E-83 dispersed
Bma10g00543 Bma-Chr10:6598170 Bma15g00679 Bma-Chr15:11162224 1.53E-166 dispersed
Bma11g00145 Bma-Chr11:1296638 Bma15g00679 Bma-Chr15:11162224 1.26E-148 dispersed
Bma15g00679 Bma-Chr15:11162224 Bma06g00669 Bma-Chr6:35919201 3.08E-117 dispersed
Bma15g00693 Bma-Chr15:12033701 Bma15g00679 Bma-Chr15:11162224 1.28E-22 dispersed
Bma15g00679 Bma-Chr15:11162224 Bma02g00609 Bma-Chr2:14042659 4.08E-177 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66953 PF00069 Pkinase 3.50E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00679 - - qsu:112027027 625.165