Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma15g00684 | TTCTCCGGGACTTTGCTTGATGAGACTAAGTTTGACTCAAGTCGCGATCGAGATACAACCTTCAAATTCACTCTTGGACAAGGATATTTTTGCCCTGCTTTATCGAAGGATGTCAAAACAATGAAGAAGGGTGAGAAGGTCCTTCTGACGTTGAAGCGGCAGTGTAAGTTCCTTCCTAGAGGTGGAGAAGGATTCGAGCGTCCAAGTGATGAATCTGTCGTAAAAATAAAGGTGATCGGGAAGCTGGACGAAGGTACAATATTTATGAAGAAGGGCCATGGCGATGGGGAGGAGCTCTATGAATTTAAGACCGATCAAGTAATTGATGGGCTTGATAGAGCTTTAATGACAATGAAAAAGGGGTCGGAGGCATTGTTGACTATTGCTCCTGAGTATGCATATGGTTCATCAGAGTCGTCACAGGAGTTAGCCATTGTTCTTCCCAACTCAACTGTGTTCTTTGAGGTTGAACTCGTCTCTTTTGTCAAGGAGAAGGAATCGAGGGACATGAATACGCAGGAGAAGATTGAAGCTGCTGGTAAGAAGAAGGAAGAAGGAGCTGTGAAGTATATTGAGTACGATTCTTCTTTCAGTGAGGAGGAAAAAAAGCAGGCCAAAGCACTGAAGGTGGCTTACAATCTGAATGATGCTGCTTGCAAGTTGAAGCTTAAATTGTACAAGGGGGCAAAAAAATTGTGTACCAAGGGAGCCCTCTACAGAAGGGCGCAGGCTTACATTCAAATGGCAGACTTAGACTTGGCAGACGTTGATATTAAAAAGGCCTTGGAGATTGACCCGGATAATAGGTACAACTCAAACTCAGCTGATGTCTTAAAGCAAACAACCGATGCAGGTATTTGA | 861 | 43.79 | FSGTLLDETKFDSSRDRDTTFKFTLGQGYFCPALSKDVKTMKKGEKVLLTLKRQCKFLPRGGEGFERPSDESVVKIKVIGKLDEGTIFMKKGHGDGEELYEFKTDQVIDGLDRALMTMKKGSEALLTIAPEYAYGSSESSQELAIVLPNSTVFFEVELVSFVKEKESRDMNTQEKIEAAGKKKEEGAVKYIEYDSSFSEEEKKQAKALKVAYNLNDAACKLKLKLYKGAKKLCTKGALYRRAQAYIQMADLDLADVDIKKALEIDPDNRYNSNSADVLKQTTDAGI | 286 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 11413078 | 11416123 | + | Bma013705.1 | Bma15g00684 | 96806 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma15g00684 | 286 | Gene3D | Tetratricopeptide repeat domain | 165 | 284 | IPR011990 | GO:0005515 | |
| Bma15g00684 | 286 | SUPERFAMILY | FKBP-like | 61 | 179 | - | - | |
| Bma15g00684 | 286 | ProSiteProfiles | TPR repeat profile. | 235 | 268 | IPR019734 | GO:0005515 | |
| Bma15g00684 | 286 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 162 | 271 | - | - | |
| Bma15g00684 | 286 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 28 | 56 | - | - | |
| Bma15g00684 | 286 | SUPERFAMILY | TPR-like | 187 | 270 | IPR011990 | GO:0005515 | |
| Bma15g00684 | 286 | Gene3D | - | 59 | 164 | IPR046357 | GO:0003755 | |
| Bma15g00684 | 286 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 74 | IPR001179 | GO:0003755 | |
| Bma15g00684 | 286 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 58 | 161 | - | - | |
| Bma15g00684 | 286 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 28 | - | - | |
| Bma15g00684 | 286 | Gene3D | - | 1 | 58 | IPR046357 | GO:0003755 | |
| Bma15g00684 | 286 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 1 | 65 | IPR001179 | GO:0003755 | |
| Bma15g00684 | 286 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 67 | 159 | IPR001179 | GO:0003755 | |
| Bma15g00684 | 286 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 162 | 271 | - | - | |
| Bma15g00684 | 286 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 28 | 56 | - | - | |
| Bma15g00684 | 286 | SUPERFAMILY | FKBP-like | 1 | 61 | - | - | |
| Bma15g00684 | 286 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 58 | 161 | - | - | |
| Bma15g00684 | 286 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 28 | - | - | |
| Bma15g00684 | 286 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 71 | 162 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma15g00684 | Bma-Chr15:11413078 | Bma08g00849 | Bma-Chr8:46500040 | 4.01E-08 | dispersed | |
| Bma15g00684 | Bma-Chr15:11413078 | Bma15g00650 | Bma-Chr15:9407932 | 1.59E-12 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma15g00684 | K09571 | - | pvy:116144252 | 337.035 |