Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00705 ATGCAATATGCCCGCTTAGTTTTTCGTCAAATCCAAGAACCAAATTGCTTTTCTTGGAACACCATTATAAGGGCTCTTGCTGAAAGCAACGAAAAGGAAGATCAGTTGGAGGCATTACTACTCTTCTGTGAATTGGTTTCTGATGATTTTGTAGATCCTAATAGATTCACATTTCCATCTGCGTTAAAAGCTTGTGCTAGAACTTCAAAGATTCAAGAAGGGAAACAAGTTCATGGGTTGGCCGTGAAATTCGGATTCGATTGCGATGAATATGTGATTAGCAATCTTGTACTAATGTACACGATGTGTGGGCTTATTGAGGACGCTCACGCATTATTTTTGCAAACATTAGTTAATTTTGATGATACGAATAAAGCAAATGTCGATAAGAGAAGACGGGAGGGCAATGTTGTTCTGTGGAATGTGTTGGTTGATGCGTATATCAGAGTTGGTGATTTTCAGGCAGCAAATCTTCTGTTTGATAAAATGTCTGAAAGAAGTATAATCTCATGGAATGTGATGATTTCTGCCTATGCACAAAATGGATTTTTTAAAGAGGCTATACAATTGTTTCATGAGATGCAGATTGGTGAAATCTCTCCAAATTATGTGACTCTTGTAAGCATTTTGCCTGCGATTTCTCGGCTGGGTGCACTCGAATTAGGGAAATGGGTCCATTTATATGCAGAAAAACACAAAATTGGTATTGATGATGTACTTGGTTCGGCTTTGGTCGACATGTATTCTAAGTGCGGAAGCATTGAGGAGGCGATTCAAATTTTCGAGAGGCTGCCTAAGAAAAATCCAATAACTTGGAACGCCATGATTGGTGGGTTCGCAATGCATGGCCGAGCGGTCGACGCCTTCGTTTATTTTTCAAGAATGGAAAGGTATGGCGTAACACCTAACGATGTCACTTATATCGGTCTTTTGAGTGCTTGCAGCTACGGAGGCTTCGTAATGGAAGGTAGATCATACTTCAACCATATGATAAGTGTCGTAAAATTAGAGCCTCGAATAGAGCATTATGGATCCTTGCTCGGGGCTTGTAAGAAATACCGAAATGATAAAATCGGAAAAAGGGTAGCTGAGATACTAATGGATTTGGCTCCTCATGATAGTGGATCATATGTGGCTCTGTCTAACATTTATGCATCTTCAGAATACTGGGATGGAGTTGCAGCGGTGAGGTTGAAGATGAAGGAAATGGAAATTCGAAAAGACCCAGGATGCTGTTGGATCGAAATCAATGGAATCATGCACGAGTTTCTCGTTGAAGACTCTTCCCATCCTCGAGCTGACGAAATCCACGAAAAGTTAGAAGAAATTTCAAGTAAATTGGCGTTAGCCGGCTACGAGCCGAACACGTCGCAGGTTTTGATCGAAGTGGATGAAGGAGAGAAGACCAGTTTGTTGAACTTTCACAGTGAGAAGATTGCTATTGCATTTGGATTGATCAGCATGAGTCCTCAAATTCCCCTTAGGATTGTGAAAAACTTGCGAATCTGCGAAGATTGTCACTCTTCGATCAAGAGCGGACAATATCTTGCTGGGAAAAAGGGTCGTTACAGCTCCAAAAAGCGTCTTGCTATCTTGGGAGGGTCTCTTTACATATATGTTCAACTTGTACTGGGAAAAATCAAAGCTTCGCTGCAAGGTAACTCCCAAAACCTCCTTTTGTCTTCATGGAATACTTCTGTTCCTCTCTGCCAATGGCGAGGACTCAAATGGGTTTTCTCCGATGGCTCCCCTCTTCTCTGCGACGGACCCTTCCCAACCCCAGGCGACCAACCTCACTCTCTTCAAGGACCCATCCGTTCATCTCCTTTCTCTGCGCTTCCTGCTGCCAACCTTACTGGCTCGCTTCCTCCTGAGGTCGGTGAGTTCTCTTTCCTCCACAGCCTCTTCCTCAGCATTAATTCTTTGACCGGAGCTATTCCTCTTGAAATTGGTTACGGCTCGTCTCTTTCTGAAATTGATTTGAGTAATAATTTGTTGAGTGAGGTTTTGCCTCCGTCAATTTGGAATCTCTGCGATAAGATTGTTTCGATTAGGGTTCATGGAAACTCGCTATCTGGAGACATTCCACAACCTGCATTGCCTAATTCTACTTGCGCTCGTCTTGAAGTATTGGACAGTTTTCAGGGTCTTAAACAACTTGATCTTAGTGGAAACATGTTTTCTGGTTCTATTCCTGAAGGTTTGTCCAAGTTAAGTCTTGAAAAAGTGAACCTCTCACACAATAATTTCACTGGAACTTTACCAGTTTTCGGTAGTTCCAAATTTGGAGCGGAAGCTTTCGAGGGAAACAATCCCGGGCTTTGTGGGTCGCCTTTGAGAAGTTGTATCGGAAGTTCAGGACTGAGCTCCGGCGCTATTGCCGGAATTGTAATCGGATTGATGACCGGAACCAGCAGATCTGAGAGCGAAGGCGAATTCGAGGAAGAAGAAGAAGGTGAAGAAGAAGACTTAGAAAACCAAAGCAACAGAGGCCGGGGAAATGACGGGAAGCTGATTCAGTTTCAGGGCGGGGAGCATTTGACATTAGAGGAGGTGTTGAACGCAACAGGGCAAGTAATGGAGAAAACCAGCTATGGAACTGTGTATAAAGCCAAGCTTGCAGATGGGGGAGTGATTGCTTTGAGATTGTTGAGAGAAGGGAAGAGAGGGGAGAAGCTTTTAATCTATGACTACCTTCCTCAGAGAAATCTGCATGATCTTTTACATGAATCTACAGCAGGGAAACCAGCACTGAATTGGGCTCGAAGACATAAAATAGCCTTAGGCGTAGCTCGAGGACTAGCATATCTTCACAGTCTTGAGACACCAGTTACTCATGGCAATGTGCGGTCTAAAAACGTGCTTGTGGACGAGTTTTTCGTTGCTCGGCTAACCGAGTTCGGCCTTGACAAGCTGATGATTCCTGCTGTTGCCGACGAAATCATCGCACTAGCAAAGACCGATGGACACAAGGCACCGGAGCTTCAAAAGATGAAGAAATGCAATTCAAGAACAGACGTACACGCGTTTGGAATATTCTTGTTGGAAATTTTGATAGGAAAAAAACCCGGAAAAGACGGGAGAAACGGGGAGTTTGTGGATTTGCCGTCGATGGTGAAAGTTGCAGTTCTAGAGGAGACGGCAATGGAGGTTTTTGACGTCGAGATTCTAAAGGGTATAAGAACTCCGATGGAAGACGGGTTGGTCCAGGCATTGAAGCTAGCGATGGGTTGTTGTGCTCCGGTTGCTTCAGTGAGGCCGGCAATGGATGAAGTCGTAAAGCAATTGGATGAGAATAGACCAAGGAATAGGTCGGCATTGTATAGCCCGACGGAAACGAGGAGCGAAATCGGTACGCCTTTTTAA 3366 43.97 MQYARLVFRQIQEPNCFSWNTIIRALAESNEKEDQLEALLLFCELVSDDFVDPNRFTFPSALKACARTSKIQEGKQVHGLAVKFGFDCDEYVISNLVLMYTMCGLIEDAHALFLQTLVNFDDTNKANVDKRRREGNVVLWNVLVDAYIRVGDFQAANLLFDKMSERSIISWNVMISAYAQNGFFKEAIQLFHEMQIGEISPNYVTLVSILPAISRLGALELGKWVHLYAEKHKIGIDDVLGSALVDMYSKCGSIEEAIQIFERLPKKNPITWNAMIGGFAMHGRAVDAFVYFSRMERYGVTPNDVTYIGLLSACSYGGFVMEGRSYFNHMISVVKLEPRIEHYGSLLGACKKYRNDKIGKRVAEILMDLAPHDSGSYVALSNIYASSEYWDGVAAVRLKMKEMEIRKDPGCCWIEINGIMHEFLVEDSSHPRADEIHEKLEEISSKLALAGYEPNTSQVLIEVDEGEKTSLLNFHSEKIAIAFGLISMSPQIPLRIVKNLRICEDCHSSIKSGQYLAGKKGRYSSKKRLAILGGSLYIYVQLVLGKIKASLQGNSQNLLLSSWNTSVPLCQWRGLKWVFSDGSPLLCDGPFPTPGDQPHSLQGPIRSSPFSALPAANLTGSLPPEVGEFSFLHSLFLSINSLTGAIPLEIGYGSSLSEIDLSNNLLSEVLPPSIWNLCDKIVSIRVHGNSLSGDIPQPALPNSTCARLEVLDSFQGLKQLDLSGNMFSGSIPEGLSKLSLEKVNLSHNNFTGTLPVFGSSKFGAEAFEGNNPGLCGSPLRSCIGSSGLSSGAIAGIVIGLMTGTSRSESEGEFEEEEEGEEEDLENQSNRGRGNDGKLIQFQGGEHLTLEEVLNATGQVMEKTSYGTVYKAKLADGGVIALRLLREGKRGEKLLIYDYLPQRNLHDLLHESTAGKPALNWARRHKIALGVARGLAYLHSLETPVTHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEIIALAKTDGHKAPELQKMKKCNSRTDVHAFGIFLLEILIGKKPGKDGRNGEFVDLPSMVKVAVLEETAMEVFDVEILKGIRTPMEDGLVQALKLAMGCCAPVASVRPAMDEVVKQLDENRPRNRSALYSPTETRSEIGTPF 1121
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 12837478 12847646 - Bma030825 Bma15g00705 96827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00705 1121 Gene3D Transferase(Phosphotransferase) domain 1 899 1113 - -
Bma15g00705 1121 MobiDBLite consensus disorder prediction 804 837 - -
Bma15g00705 1121 Gene3D Tetratricopeptide repeat domain 1 129 IPR011990 GO:0005515
Bma15g00705 1121 Gene3D Tetratricopeptide repeat domain 130 231 IPR011990 GO:0005515
Bma15g00705 1121 Pfam PPR repeat 138 167 IPR002885 -
Bma15g00705 1121 Pfam PPR repeat 169 195 IPR002885 -
Bma15g00705 1121 Pfam PPR repeat 242 267 IPR002885 -
Bma15g00705 1121 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 886 1121 - -
Bma15g00705 1121 MobiDBLite consensus disorder prediction 1101 1121 - -
Bma15g00705 1121 Gene3D Ribonuclease Inhibitor 541 710 IPR032675 -
Bma15g00705 1121 Pfam E motif 353 415 IPR046848 -
Bma15g00705 1121 SUPERFAMILY TPR-like 133 274 IPR011990 GO:0005515
Bma15g00705 1121 ProSiteProfiles Protein kinase domain profile. 824 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00705 1121 MobiDBLite consensus disorder prediction 1102 1121 - -
Bma15g00705 1121 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 540 887 - -
Bma15g00705 1121 TIGRFAM PPR: pentatricopeptide repeat domain 138 168 IPR002885 -
Bma15g00705 1121 TIGRFAM PPR: pentatricopeptide repeat domain 270 303 IPR002885 -
Bma15g00705 1121 TIGRFAM PPR: pentatricopeptide repeat domain 169 202 IPR002885 -
Bma15g00705 1121 Pfam PPR repeat family 268 314 IPR002885 -
Bma15g00705 1121 SUPERFAMILY L domain-like 617 780 - -
Bma15g00705 1121 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 268 302 IPR002885 -
Bma15g00705 1121 Pfam Protein tyrosine and serine/threonine kinase 888 1096 IPR001245 GO:0004672|GO:0006468
Bma15g00705 1121 SUPERFAMILY Protein kinase-like (PK-like) 859 1099 IPR011009 -
Bma15g00705 1121 Pfam DYW family of nucleic acid deaminases 451 512 IPR032867 GO:0008270
Bma15g00705 1121 Gene3D Tetratricopeptide repeat domain 232 419 IPR011990 GO:0005515
Bma15g00705 1121 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 167 201 IPR002885 -
Bma15g00705 1121 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 886 1121 - -
Bma15g00705 1121 Gene3D Ribonuclease Inhibitor 712 782 IPR032675 -
Bma15g00705 1121 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 136 166 IPR002885 -
Bma15g00705 1121 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 540 887 - -
Bma15g00705 1121 MobiDBLite consensus disorder prediction 810 824 - -
Bma15g00705 1121 Pfam E+ motif 421 447 IPR046849 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00260 Bma-Chr2:2738238 Bma15g00705 Bma-Chr15:12837478 8.15E-21 dispersed
Bma15g00705 Bma-Chr15:12837478 Bma15g00755 Bma-Chr15:15297967 6.04E-14 dispersed
Bma15g00705 Bma-Chr15:12837478 Bma05g00256 Bma-Chr5:7098122 2.67E-13 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66955 PF07714 PK_Tyr_Ser-Thr 6.10E-18 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00705 - - cmo:103497530 825.469