Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00732 GAAAAAATGGAGGCAAGGCCTGCTTTATTTATTCAAGGAAATGGTGCAAAGCAAATTAATAGAATTGGGGAATCTGTTGTTCTGCCTTCGTTTATACCAGTCCAAGAGACATATCCTAACTTGCTTGATTCTCATCATGTTTTGGTGGAAAGAGAACTTGTTACAAAGCCTCTCAACCATGCTTGTCACTTACCCACTGACAGTGGTATAATTGATGACATGTTTTCGCCATCCATGGGATTAACAACAAATCGGCAGGCTGTTTCACCTCAGAGACAGCACTCCAAAGTCTGTCCTCCTGTTTCAATGATATCAACAAATGGGGCACTTCTGCATTCTCATTCTGCACTACTTCCTTCTACTGCATCAGGTCATGATTGCGAAGAAAATAATGTGGCCTGGTCTGCAGATGCTTTGTCTAGTTTACTAGATCTTTCAGTAAATATCCCAGTTATTGGCAATAGTCAGATAGACAGCAGCAGATGTATTGATGTGATGCAATCTGAGGAATTTAGCAAACGAAATGATTGGCCAGACTGGGCAGACCAGCTAATGACTCCTAACTGGAATGACCTCTTAGCTGATACTAACATTGCAGAGATGGAATCAAAGATGGCATACCAGGTTTCTAATTCATCACCAAACCACCAACCTTGCTTACTGGTACTTTCTCCGCCAGGAGAAAGACAGACTGTTTTTCCTTTGAGTTCCATGGCAAATGCTGTATCAAACAAGTCACGCATGCGTTGGACACCTGAACTTCATGAGGCATTTGTGGAGGCTGTGAATCAACTTGGTGGCAGTGAAAGAGCGACGCCAAAGGGCATTCTAAAGCTCATGAAAGTTGAAGGTCTGACAATTTATCATGTGAAAAGCCATTTACAGGTATAG 891 42.2 EKMEARPALFIQGNGAKQINRIGESVVLPSFIPVQETYPNLLDSHHVLVERELVTKPLNHACHLPTDSGIIDDMFSPSMGLTTNRQAVSPQRQHSKVCPPVSMISTNGALLHSHSALLPSTASGHDCEENNVAWSADALSSLLDLSVNIPVIGNSQIDSSRCIDVMQSEEFSKRNDWPDWADQLMTPNWNDLLADTNIAEMESKMAYQVSNSSPNHQPCLLVLSPPGERQTVFPLSSMANAVSNKSRMRWTPELHEAFVEAVNQLGGSERATPKGILKLMKVEGLTIYHVKSHLQV 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 13582960 13584038 + Bma013786.1 Bma15g00732 96854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00732 296 SUPERFAMILY Homeodomain-like 243 295 IPR009057 -
Bma15g00732 296 Pfam Myb-like DNA-binding domain 247 295 IPR001005 -
Bma15g00732 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 244 296 IPR017930 -
Bma15g00732 296 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 245 296 IPR006447 GO:0003677
Bma15g00732 296 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 43 295 - -
Bma15g00732 296 Gene3D - 244 296 - -
Bma15g00732 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 43 295 IPR044848 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g00485 Bma15g00732 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00423 Bma-Chr13:7767665 Bma15g00732 Bma-Chr15:13582960 1.53E-41 dispersed
Bma15g00732 Bma-Chr15:13582960 Bma04g01422 Bma-Chr4:49129282 4.49E-20 dispersed
Bma15g00732 Bma-Chr15:13582960 Bma09g00485 Bma-Chr9:40226115 6.43E-143 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58506 PF00249 Myb_DNA-binding 8.10E-08 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00732 - - hbr:110657601 283.493