Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00761 ATGGGAGAAGGCGGATCCGCTACGAGCAGCGGAAACAGAGGTATTCCTGGGGGCAATAACTCCGCCCATTCCAACAAAAACAGCAACGATAATGGCAACAACAGCAACAAGCCCGAGTGGCTGCAACACTATGATCTGATCGGGAAGATCGGAGAGGGAACTTATGGTCTTGTATTCCTTGCGAGAATTAAAGCTCCCGCCGCAAGTCGGGGAAAGTCCATTGCCATTAAAAAGTTCAAGCAATCTAAGGACGGTGACTTGCTGCGGGAAATAACACATGAGAATGTTGTGAAGCTAGTGAACGTCCACATTAATCCCGCAGATATGTCCCTGTATCTGGCCTTTGATTACGCAGAACATGACCTCTATGAAATTATTAGACATCACAGGGACAAGGTCAACCATGCAATTAATCATTACACTGTCAAATCATTGTTGTGGCAGCTGCTTAATGGCCTGAACTATCTTCATAGTAATTGGATCATTCACCGTGATCTAAAGCCCTCAAATATTTTGGTTATGGGAGAGGGAGAAGAGCAGGGTATTGTTAAAATAGCTGATTTTGGCCTTGCAAGAATATACCAAGCCCCCCTTAAACCATTATCTGACAATGGGGTTGTTGTAACCATCTGGTATCGTGCTCCCGAGCTACTCCTAGGAGCGAAGCACTATACAAGTGCTGTTGATATGTGGGCTGTTGGGTGCATTTTTGCAGAGCTTTTGACACTGAAACCACTCTTTCAAGGATCAGAAGTTAAAGGGACACCAAATCCTTTCCAGATATTATCTAATAATACTATTTTCCACATTAATGTTGTAGGCCATCCCACAATCGAAAAGTGGCCAACACTTGCAAATCTTCCACATTGGCAACAAGATGTCCAACATATTCAAGGTCATAAGTATGATAATGCTGGACTTTATAGTGTTGTTCATCTTTCTCCTAAAAGTCCCGCGTACGATCTCCTATCAAAGATGTTAGAATATGATCCGAGAAAACGTATAACGGCAGCACAAGCTCTGGATCATGAGTACTTTCGGATTGAACCTCTACCAGGGTACAATGCCTTGGTGCCCAACCAACCTGGGGAGAAGATTGTGAATTACACTACTCGTCCTGTAGACACAACTGCTGATTTTGAGGGAACAACTAGCCTTCAACCCACACAATCGGTATCATCGGGAAATCAAGTTTCTGGGAATATGCAGGGTGCTCATGTAGTGGCAAACAGGTCTGTCCCTCGGGGTATGTCCATGGTTGCCATGCAGAGGATGCAATCTCAAGGCATGACGGCTTATAATCTTGCATCTCAAGCTGGGATGGGTGGTGGTATGAATCCTAGCAGCATTCCAATGCAGCGTGGTGTTTCTGCTCAGACCCACCAGCAACAACAGCAGTTGAGGCGCAAAGACCCCGGAATGGGGATGCCTGGATACCCACCACAGCAGAAATCAAGACGCATGTGA 1467 45.47 MGEGGSATSSGNRGIPGGNNSAHSNKNSNDNGNNSNKPEWLQHYDLIGKIGEGTYGLVFLARIKAPAASRGKSIAIKKFKQSKDGDLLREITHENVVKLVNVHINPADMSLYLAFDYAEHDLYEIIRHHRDKVNHAINHYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGIVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGSEVKGTPNPFQILSNNTIFHINVVGHPTIEKWPTLANLPHWQQDVQHIQGHKYDNAGLYSVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALDHEYFRIEPLPGYNALVPNQPGEKIVNYTTRPVDTTADFEGTTSLQPTQSVSSGNQVSGNMQGAHVVANRSVPRGMSMVAMQRMQSQGMTAYNLASQAGMGGGMNPSSIPMQRGVSAQTHQQQQQLRRKDPGMGMPGYPPQQKSRRM 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15730603 15744515 + Bma013830.2 Bma15g00761 96883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00761 488 Gene3D Phosphorylase Kinase; domain 1 25 116 - -
Bma15g00761 488 MobiDBLite consensus disorder prediction 1 37 - -
Bma15g00761 488 CDD STKc_CDK8_like 44 346 - -
Bma15g00761 488 MobiDBLite consensus disorder prediction 439 488 - -
Bma15g00761 488 ProSitePatterns Protein kinases ATP-binding region signature. 50 78 IPR017441 GO:0005524
Bma15g00761 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bma15g00761 488 PANTHER CYCLIN-DEPENDENT KINASE E-1 32 487 - -
Bma15g00761 488 SUPERFAMILY Protein kinase-like (PK-like) 39 347 IPR011009 -
Bma15g00761 488 MobiDBLite consensus disorder prediction 450 469 - -
Bma15g00761 488 PANTHER CELL DIVISION PROTEIN KINASE 32 487 - -
Bma15g00761 488 ProSiteProfiles Protein kinase domain profile. 44 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00761 488 Gene3D Transferase(Phosphotransferase) domain 1 117 356 - -
Bma15g00761 488 Pfam Protein kinase domain 44 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00761 488 SMART serkin_6 44 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00761 Bma-Chr15:15730603 Bma01g00022 Bma-Chr1:345531 3.68E-66 dispersed
Bma15g00761 Bma-Chr15:15730603 Bma08g01208 Bma-Chr8:51074399 2.12E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66956 PF00069 Pkinase 2.20E-59 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00761 K02208 - csv:101203984 764.222