Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma15g00761 | ATGGGAGAAGGCGGATCCGCTACGAGCAGCGGAAACAGAGGTATTCCTGGGGGCAATAACTCCGCCCATTCCAACAAAAACAGCAACGATAATGGCAACAACAGCAACAAGCCCGAGTGGCTGCAACACTATGATCTGATCGGGAAGATCGGAGAGGGAACTTATGGTCTTGTATTCCTTGCGAGAATTAAAGCTCCCGCCGCAAGTCGGGGAAAGTCCATTGCCATTAAAAAGTTCAAGCAATCTAAGGACGGTGACTTGCTGCGGGAAATAACACATGAGAATGTTGTGAAGCTAGTGAACGTCCACATTAATCCCGCAGATATGTCCCTGTATCTGGCCTTTGATTACGCAGAACATGACCTCTATGAAATTATTAGACATCACAGGGACAAGGTCAACCATGCAATTAATCATTACACTGTCAAATCATTGTTGTGGCAGCTGCTTAATGGCCTGAACTATCTTCATAGTAATTGGATCATTCACCGTGATCTAAAGCCCTCAAATATTTTGGTTATGGGAGAGGGAGAAGAGCAGGGTATTGTTAAAATAGCTGATTTTGGCCTTGCAAGAATATACCAAGCCCCCCTTAAACCATTATCTGACAATGGGGTTGTTGTAACCATCTGGTATCGTGCTCCCGAGCTACTCCTAGGAGCGAAGCACTATACAAGTGCTGTTGATATGTGGGCTGTTGGGTGCATTTTTGCAGAGCTTTTGACACTGAAACCACTCTTTCAAGGATCAGAAGTTAAAGGGACACCAAATCCTTTCCAGATATTATCTAATAATACTATTTTCCACATTAATGTTGTAGGCCATCCCACAATCGAAAAGTGGCCAACACTTGCAAATCTTCCACATTGGCAACAAGATGTCCAACATATTCAAGGTCATAAGTATGATAATGCTGGACTTTATAGTGTTGTTCATCTTTCTCCTAAAAGTCCCGCGTACGATCTCCTATCAAAGATGTTAGAATATGATCCGAGAAAACGTATAACGGCAGCACAAGCTCTGGATCATGAGTACTTTCGGATTGAACCTCTACCAGGGTACAATGCCTTGGTGCCCAACCAACCTGGGGAGAAGATTGTGAATTACACTACTCGTCCTGTAGACACAACTGCTGATTTTGAGGGAACAACTAGCCTTCAACCCACACAATCGGTATCATCGGGAAATCAAGTTTCTGGGAATATGCAGGGTGCTCATGTAGTGGCAAACAGGTCTGTCCCTCGGGGTATGTCCATGGTTGCCATGCAGAGGATGCAATCTCAAGGCATGACGGCTTATAATCTTGCATCTCAAGCTGGGATGGGTGGTGGTATGAATCCTAGCAGCATTCCAATGCAGCGTGGTGTTTCTGCTCAGACCCACCAGCAACAACAGCAGTTGAGGCGCAAAGACCCCGGAATGGGGATGCCTGGATACCCACCACAGCAGAAATCAAGACGCATGTGA | 1467 | 45.47 | MGEGGSATSSGNRGIPGGNNSAHSNKNSNDNGNNSNKPEWLQHYDLIGKIGEGTYGLVFLARIKAPAASRGKSIAIKKFKQSKDGDLLREITHENVVKLVNVHINPADMSLYLAFDYAEHDLYEIIRHHRDKVNHAINHYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGIVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGSEVKGTPNPFQILSNNTIFHINVVGHPTIEKWPTLANLPHWQQDVQHIQGHKYDNAGLYSVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALDHEYFRIEPLPGYNALVPNQPGEKIVNYTTRPVDTTADFEGTTSLQPTQSVSSGNQVSGNMQGAHVVANRSVPRGMSMVAMQRMQSQGMTAYNLASQAGMGGGMNPSSIPMQRGVSAQTHQQQQQLRRKDPGMGMPGYPPQQKSRRM | 488 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 15730603 | 15744515 | + | Bma013830.2 | Bma15g00761 | 96883 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma15g00761 | 488 | Gene3D | Phosphorylase Kinase; domain 1 | 25 | 116 | - | - | |
Bma15g00761 | 488 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Bma15g00761 | 488 | CDD | STKc_CDK8_like | 44 | 346 | - | - | |
Bma15g00761 | 488 | MobiDBLite | consensus disorder prediction | 439 | 488 | - | - | |
Bma15g00761 | 488 | ProSitePatterns | Protein kinases ATP-binding region signature. | 50 | 78 | IPR017441 | GO:0005524 | |
Bma15g00761 | 488 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 161 | 173 | IPR008271 | GO:0004672|GO:0006468 | |
Bma15g00761 | 488 | PANTHER | CYCLIN-DEPENDENT KINASE E-1 | 32 | 487 | - | - | |
Bma15g00761 | 488 | SUPERFAMILY | Protein kinase-like (PK-like) | 39 | 347 | IPR011009 | - | |
Bma15g00761 | 488 | MobiDBLite | consensus disorder prediction | 450 | 469 | - | - | |
Bma15g00761 | 488 | PANTHER | CELL DIVISION PROTEIN KINASE | 32 | 487 | - | - | |
Bma15g00761 | 488 | ProSiteProfiles | Protein kinase domain profile. | 44 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma15g00761 | 488 | Gene3D | Transferase(Phosphotransferase) domain 1 | 117 | 356 | - | - | |
Bma15g00761 | 488 | Pfam | Protein kinase domain | 44 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma15g00761 | 488 | SMART | serkin_6 | 44 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma15g00761 | Bma-Chr15:15730603 | Bma01g00022 | Bma-Chr1:345531 | 3.68E-66 | dispersed | |
Bma15g00761 | Bma-Chr15:15730603 | Bma08g01208 | Bma-Chr8:51074399 | 2.12E-62 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66956 | PF00069 | Pkinase | 2.20E-59 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma15g00761 | K02208 | - | csv:101203984 | 764.222 |