Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00789 ATGATAAGTTGGTACAGCTACGTGGTGGCAAAAAGATGGTGGTGCGTGGTGGCAAAAAGATGCAAAAAAGAAGTGGAGACTAGAAGGGCACGGAGAATGTTGCTACGAGAGATTGGGGGTGATCGTCTACCCTCCTCCACCGAACGAAAGAAAGAAAACAAGACGCAGAGAGAACTGCATATATTCAGTTTCAAAACCATTGTTTCTGCCACCAACAACTTCTCCCATGAAAACCAGTTGGGAAAAGGAGGATATGGCCCGGTTTATAAGGGAAGGTTACTAGATGGTCAAGAAATTGCCATAAAAAAACTTTCAACCAGTTCAGGACAAGGACTTGTGGAGTTCAAGAAGGAAGCAATACTCATTGCTAAGCTCCAACATACTAATCTGGTTAGACTTTTAGGGTTTTGCGTTAAAGGAGAAGAGAAAGCCTTGGTATACGAGTACATGCCCAATAAAAGCTTAGATTTCTTCCTTTTTGATTCTACTAGAAAGAAGATACTGGACTGGAAGAAACGCTTCATCATCATCGAAGGCATTGCCCAAGGACTAGTTTACCTCCACAAGTATTCGAGATTGAAAATTATTCACAGAGATTTGAAAGCAAGCAACATTCTTCTCGATTTAGAAATGAATCCCAAAATATCAGATTTTGGGATGGCCAGATTGCTGGGTTCTGAAGACTCGGAAGAAAACACAAACAAAATTGTCGGCACATTTGGGTATATGCCTCCAGAATACGCTCTACAGGGAACCGTGTCCATCAAAACTGACGTGTTTAGTTTTGGAATTTTGTTGCTCGAGATTGTGAGCGGGAGGAAGAATAACAGTCACTACCATCCAGATCACCCCCTAAATCTTACAGGATATGCTTGGACTTTGTGGAAGGACGGCAAAGGGGTGGAGCTGATTGACCCTTCACTGGACGAATCAATTCCTCGTGATGAAGTTACGAAATGCATACAAGTCGGTCTGCTCTGTGTTCAAGATCAGGCGAGCAACAGACCCACCATGATTGACGTTGTTTTTATGCTCTCAACTGAAAGCGCCCAACTTCCATTACCGAGAAAGCCTGCGTTCTTCATTAGTAGCATTGCCGAAACGCCAGAGGAAGCCCATACGCGAGTTGAAATCTTTTCAATAAATGAAATGACCATGTCAAATATGGAGGTAAGGTGA 1179 42.92 MISWYSYVVAKRWWCVVAKRCKKEVETRRARRMLLREIGGDRLPSSTERKKENKTQRELHIFSFKTIVSATNNFSHENQLGKGGYGPVYKGRLLDGQEIAIKKLSTSSGQGLVEFKKEAILIAKLQHTNLVRLLGFCVKGEEKALVYEYMPNKSLDFFLFDSTRKKILDWKKRFIIIEGIAQGLVYLHKYSRLKIIHRDLKASNILLDLEMNPKISDFGMARLLGSEDSEENTNKIVGTFGYMPPEYALQGTVSIKTDVFSFGILLLEIVSGRKNNSHYHPDHPLNLTGYAWTLWKDGKGVELIDPSLDESIPRDEVTKCIQVGLLCVQDQASNRPTMIDVVFMLSTESAQLPLPRKPAFFISSIAETPEEAHTRVEIFSINEMTMSNMEVR 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16806892 16808454 - Bma013869.2 Bma15g00789 96911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00789 392 Pfam Protein tyrosine and serine/threonine kinase 77 342 IPR001245 GO:0004672|GO:0006468
Bma15g00789 392 ProSiteProfiles Protein kinase domain profile. 74 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00789 392 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 364 - -
Bma15g00789 392 Gene3D Transferase(Phosphotransferase) domain 1 150 353 - -
Bma15g00789 392 PANTHER OS01G0783800 PROTEIN 29 364 - -
Bma15g00789 392 SMART serkin_6 74 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00789 392 CDD STKc_IRAK 80 345 - -
Bma15g00789 392 Gene3D Phosphorylase Kinase; domain 1 41 149 - -
Bma15g00789 392 SUPERFAMILY Protein kinase-like (PK-like) 56 374 IPR011009 -
Bma15g00789 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00352 Bma-Chr11:3756533 Bma15g00789 Bma-Chr15:16806892 6.36E-116 dispersed
Bma15g00371 Bma-Chr15:3920919 Bma15g00789 Bma-Chr15:16806892 0 dispersed
Bma15g00372 Bma-Chr15:3971300 Bma15g00789 Bma-Chr15:16806892 3.90E-21 dispersed
Bma15g00789 Bma-Chr15:16806892 Bma07g00326 Bma-Chr7:4240191 2.42E-130 dispersed
Bma15g00789 Bma-Chr15:16806892 Bma07g00320 Bma-Chr7:3862097 2.39E-125 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66959 PF07714 PK_Tyr_Ser-Thr 9.00E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00789 - - qsu:112032008 509.99