Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00813 TACAAAGCATTTGATGAAGTAAATGGACTTGAAGTGGCATGGAACCAAGTTCAAATCGATGAGGTGCTACAGTCTCCAGATGACTTGGAAAGGCTATACTCAGAAGTGCACCTTTTAAAGTCACTGAAACATAACAACATTGTGAGGTTCTACAATTCATGGATTGATGATAAGAACAAAACCGTTAATATCATTACTGAGTTGTTTACTTCTGGAAGCCTCAGACAGTATTGTAAAAAGCACAAAAAGGTTGACATGAAGGCAGTGAAGGGATGGGCAAGACAGATTTTGATGGGTTTGAACTACCTTCATAGTCATAACCCACCAATTATACACAGAGATCTGAAGTGTGATAACATATTTATCAACGGTAATCAAGGAGAAGTAAAGATTGGAGATCTTGGGTTTGCAACTATTATGCAGCAATCAACTGCTAAAAGTGTAATTGGTACTCCCGAGTTCATGGCTCCGGAACTTTATGATGAAAATTACGATGAATTAGCTGATATATATTCTTTTGGGATGTGCATGCTCGAGATGGTGACTTTTGAATATCCTTACAGTGAGTGTAGGAACTCCGCTCAAATTTACAAGAAGGTCACTTCGGGTATAAAGCCTGCTGCTCTCTGTAAAGTGAAAGATCCAGATATGAAGCAATTTATAGAAAAGTGTTTAGTTCCTGCGACTGAAAGATTTTCTGCGAAAGAACTTCTAATGGATCCTTTTCTCCAAGCGAATGGATCAGCAAAGTATCGTCCTCTGCCACTCCCAGATATTGTTTTTCCTAAATTTGGAACGTTTGGAGATCGTTGTTTGATGTCAGAAGGACCTGCCAGTGCACGAAATGCACCAACTTCCATGGACGTAAATAACGAGGGTGAGCCACCCATTATCACTTCTTTTGATACTTCAGTTGATGGGGAGTCCCATTCTCTGTATGTGGAGGTTAAAAGAACACAGAGGGGGAGTGTCTTCTTATTGAAAGGCGAGCAAAATGATGAGAATTCTCTTTCTCTGATACTTCAGATAGCAGATCAAAATGGTCGTGCTAGGAATATCCATTTTATATTCTACCTCGAAAGTGATACAGCTCTCTCTCTTTCAAGCGAAATGGTGGAACAACTGGAACTACCTGACCAAAATGTTATGCTCATAGCAGAATTGATTGACTTGTTGCTTGTAAACTTAGTTCCCAGCTGGAAACCTTGTGTTCGTATAGAGCATTTGATGGCTGCAAATGGAACGAGAATTCCTATTGGTCATAAAAAAGATGTGCCGTTGCCAAAACAAAATGAAGAAAATATGTTGAGATCTCGACAAAAGGCTTATGAGCCGTCGAATCCTTCATCGTCACAAGTTCTCCCTAATTCTTCCTCATTGGACTCATTAAATCAGCTAATGCAGGAAAGGTCCGATAATCCCAAACCAGACGACATTAGATACTGTTGTTTACCAAGTTTAACCACAACAGACAATAGATTTTCTGGAATGTCTTATGTTTCTGCAACCTCTAATGAGTTTAACGATAGGAACTGGTCCATTAATTCATACATGTCGGTCGAGTCTGGATCGATGGACTCCAGTCAATATGGATCTCGAAGAGCTTCTGGGGTCGTATCGCCATCTTTGACCGATATGTGTGGATCGCTCGAAATCAGGAACGGGGTTTTGGAAATTGGAAGGAATAGCTTGCTTTGCTTTCAGAGGTCGCCAACCGATGGTTCATGCTTGTGTGATCAGGTGGAAGAAGAAATGAAAAGTGAGCTCGAGGTAATCGAGCTGCAATTCCAGGAGGCAATGAGAGATATATGCAAGAAAAGACACGAAGCTATCATGGACACTAGAAGAAGGTTATCACAGAAAAATATAGACACGATTTGCTAG 1884 40.45 YKAFDEVNGLEVAWNQVQIDEVLQSPDDLERLYSEVHLLKSLKHNNIVRFYNSWIDDKNKTVNIITELFTSGSLRQYCKKHKKVDMKAVKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGFATIMQQSTAKSVIGTPEFMAPELYDENYDELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVTSGIKPAALCKVKDPDMKQFIEKCLVPATERFSAKELLMDPFLQANGSAKYRPLPLPDIVFPKFGTFGDRCLMSEGPASARNAPTSMDVNNEGEPPIITSFDTSVDGESHSLYVEVKRTQRGSVFLLKGEQNDENSLSLILQIADQNGRARNIHFIFYLESDTALSLSSEMVEQLELPDQNVMLIAELIDLLLVNLVPSWKPCVRIEHLMAANGTRIPIGHKKDVPLPKQNEENMLRSRQKAYEPSNPSSSQVLPNSSSLDSLNQLMQERSDNPKPDDIRYCCLPSLTTTDNRFSGMSYVSATSNEFNDRNWSINSYMSVESGSMDSSQYGSRRASGVVSPSLTDMCGSLEIRNGVLEIGRNSLLCFQRSPTDGSCLCDQVEEEMKSELEVIELQFQEAMRDICKKRHEAIMDTRRRLSQKNIDTIC 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19480611 19482988 + Bma013924.1 Bma15g00813 96935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00813 627 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00813 627 MobiDBLite consensus disorder prediction 440 458 - -
Bma15g00813 627 Gene3D Transferase(Phosphotransferase) domain 1 69 251 - -
Bma15g00813 627 Coils Coil 582 602 - -
Bma15g00813 627 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 1 624 - -
Bma15g00813 627 MobiDBLite consensus disorder prediction 438 458 - -
Bma15g00813 627 Pfam Protein kinase domain 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00813 627 SUPERFAMILY Protein kinase-like (PK-like) 1 302 IPR011009 -
Bma15g00813 627 Gene3D Phosphorylase Kinase; domain 1 1 67 - -
Bma15g00813 627 CDD STKc_WNK 1 243 - -
Bma15g00813 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Bma15g00813 627 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 624 - -
Bma15g00813 627 SMART serkin_6 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00052 Bma-Chr7:1400652 Bma15g00813 Bma-Chr15:19480611 8.96E-108 dispersed
Bma07g01270 Bma-Chr7:48260017 Bma15g00813 Bma-Chr15:19480611 5.40E-105 dispersed
Bma15g00813 Bma-Chr15:19480611 Bma09g00404 Bma-Chr9:34113175 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66960 PF00069 Pkinase 1.40E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00813 K08867 - vvi:100259251 775.393