Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00880 ATGATGAAAATTGCTGATAAACTGTTCTTTGTTTGGTTCCTGTCATATGGTTGTTTTGTCAGTTGTCAGCTTAATTATAAGTTCTATGACAAAACTTGCCCTAATCTAGTGAAGATCGTTCGCGCTGGAGTGCACTCGGCTGTAGCCAATGACACTCGAATGGCAGCTTCTCTCTTGCGCCTTCATTTCCACGATTGCTTGGTTAATAGGTGTGATGGTTCACTGCTGCTTGACGATACAAGTACATCTGGGGGTGAGAAAAATGCACTTCCAAACAGGAACTCAGCTCGAGGATTTGAAGTGATCGATTCAATCAAGGCTAATGTTGAGAAAGCTTGCCCATCTGTTGTTTCTTGTACAGATATTCTCACTTTGGCTGCAAGAGATGCTGTTTATCTTGCTGGAGGTCCTTTCTGGTTTGTTCAGCTGGGGAGGCGTGATGGAACAAGTGCAAGTGAGAGTGATGCTAACGAGCAGTTGCCATCACCCTTTGAGTCTTTGGAGAAAATCATTACAAAATTCACTTCGAAGGGTCTTGATGTTAAGGATGTCGTTGTCCTTTCTGGTGGACACACATTTGGGTTCGCCCAGTGCTTCACATTCAAGAACAGGCTCTTCAACTTCAATGGAACGGGCTCAGCCGACCCGACCCTCCACTCATCTTTACTGGAAACCTTACAAAGTACATGTCCAAATCAAGACAACTCAAACACGAACTTAGCCCCTTTGGATTCTGTAACAATCAACAAGTTTGACAACATCTATTACAAGAATCTGGTGAACAACTATGGGCTTCTTCAGTCAGACCAAGCTCTCATGCAAGACAGCAACACAGCTTCAATGGTCGTTTCGTATAGCAAGTACCCTTCTCTGTTTTTGAAGGATTTTGTTGTGTCAATGGTGAAAATGGCTAATATAGGTGTTCTTACTGGCCAAAATGGAGAAATCAGGAAGAATTGCAGGGTGGTCAACTAG 975 43.38 MMKIADKLFFVWFLSYGCFVSCQLNYKFYDKTCPNLVKIVRAGVHSAVANDTRMAASLLRLHFHDCLVNRCDGSLLLDDTSTSGGEKNALPNRNSARGFEVIDSIKANVEKACPSVVSCTDILTLAARDAVYLAGGPFWFVQLGRRDGTSASESDANEQLPSPFESLEKIITKFTSKGLDVKDVVVLSGGHTFGFAQCFTFKNRLFNFNGTGSADPTLHSSLLETLQSTCPNQDNSNTNLAPLDSVTINKFDNIYYKNLVNNYGLLQSDQALMQDSNTASMVVSYSKYPSLFLKDFVVSMVKMANIGVLTGQNGEIRKNCRVVN 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 29396588 29400418 + Bma014064.1 Bma15g00880 97002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00880 324 ProSiteProfiles Plant heme peroxidase family profile. 23 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 Pfam Peroxidase 40 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 Gene3D - 27 324 - -
Bma15g00880 324 Gene3D Peroxidase, domain 2 161 303 - -
Bma15g00880 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PANTHER PEROXIDASE 72-RELATED 10 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Bma15g00880 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Bma15g00880 324 CDD secretory_peroxidase 23 323 IPR033905 GO:0004601|GO:0042744
Bma15g00880 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma15g00880 324 PANTHER PEROXIDASE 10 323 - -
Bma15g00880 324 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Bma15g00880 324 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00489 Bma-Chr5:21388261 Bma15g00880 Bma-Chr15:29396588 6.22E-108 dispersed
Bma09g00308 Bma-Chr9:25691534 Bma15g00880 Bma-Chr15:29396588 3.19E-164 dispersed
Bma14g01739 Bma-Chr14:37375870 Bma15g00880 Bma-Chr15:29396588 1.51E-109 dispersed
Bma15g00880 Bma-Chr15:29396588 Bma03g01281 Bma-Chr3:22784571 1.84E-99 dispersed
Bma15g00880 Bma-Chr15:29396588 Bma08g01042 Bma-Chr8:49536459 2.19E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00880 K00430 - twl:120013130 474.937