Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00927 ATGAGTCTCAATGGCCTCCCTTCTGCTCTTTCCTCTGACGAAGCCTCGCCGGAGTGGCTTAGCAAAGCAGACAATGCGTGGCAACTTACAGCAACCACCATGGTCGGCCTCCAAAGCGTACCGGGGCTTGTCATTCTGTACGGAAGTATGGTGAAGAAAAAATGGGCCGTCAACTCCTCTTTCATGGCGCTTTACGCCTTCGCTGCAGTTCTCGTCTGCTGGGTTCTTTGGGCGCACAACATGGCCTTTGGGGACAAACTGATCCTCATTGTTGGTAAGCCCAATGTCGCCTTCTCAGAAAACCGTCTTCTCCGACAAACCCAGCTGAAGTTTGCGAATTATAAGGTGCCAATGGCTGACTATGTGTTTTTCCAATTTGCTTTCGCCGCCATTACCGTCATATTGCTAGCCGGCTCGTTGTTGGGGAGGATGAAGTTTCTTGCGTGGATGATGTTTGTCCCTCTTTGGCTCACCTTTTGTTATACAGTCGGCGCCTTCAGCATCTGGGGAAATGGTTTTGGAGAGAAAATCATCATTGATTATGCTGGCGGATATGTCATTCATCTCTCTTCAGGAGTTGCAGGTTTCACCGCTGCTTACTGGGTGGGTCCGAGAAGCGTAGACGACAGGCAGCACTTCCCACCAAACAACATAGTTCATGTGCTTGGAGGCGCCGGATTCTTATGGCTGGGTTGGACTGGTTTCAATGGAGGATCCCCGTTTGCTGCGAGTACCCTCACATCTTTAGCCGTTTGTAACACACATCTCTGCACTGCTACCAGTATCTTGATATGGATGTCTTTGGACATGATCGTCTACAAGAAAATCTCTGTGATTGGAGCGGTTCAAGGGATGATCACCGGCCTCGTTTGCATCACCCCCGGCGCTGGACTGGTGGATCCTGCTGCGGCGGCGGTAATGGGGGTTATATCAGGTTCGGTGCCGTGGTACACGATGATGATTTTACACAGAAGATTGGACTTCTTCCAGAGCGTAGACGACACTTTAGGGGTTTTCCACACTCATGCAGTGGCCGGAGCTTTGGGAGGACTACTCACCGGCTGCTTGGCCAGACCTAATCTTCTCCATCTGATGTACGGCGATAACGAATACGGTCCAGGAATCGTGTACGCCATGTTTGACGGACAGTTCAGAAAAGGTTTGAAACAGTTTGGGTTCCAGGTGAGCGGATTATTGTTCATCGCGATCTGGAACGTCATTGGAACGAGCTTGATCTGTATTTTGATAAGACGGGTCGTGACTCTGAGGATGGAGGAAGAAGAGCTCAAGATAGGGGACGACGCTGTTCATGGAGAAGAAGCTTACGCTGTGTGGGGAGACGGGGACAGAATATCGTCCACCATTCGTCTTCGCGCTTCACGAGTACCTTCTGTAAGCCGCGGAGATGATTGA 1413 50.74 MSLNGLPSALSSDEASPEWLSKADNAWQLTATTMVGLQSVPGLVILYGSMVKKKWAVNSSFMALYAFAAVLVCWVLWAHNMAFGDKLILIVGKPNVAFSENRLLRQTQLKFANYKVPMADYVFFQFAFAAITVILLAGSLLGRMKFLAWMMFVPLWLTFCYTVGAFSIWGNGFGEKIIIDYAGGYVIHLSSGVAGFTAAYWVGPRSVDDRQHFPPNNIVHVLGGAGFLWLGWTGFNGGSPFAASTLTSLAVCNTHLCTATSILIWMSLDMIVYKKISVIGAVQGMITGLVCITPGAGLVDPAAAAVMGVISGSVPWYTMMILHRRLDFFQSVDDTLGVFHTHAVAGALGGLLTGCLARPNLLHLMYGDNEYGPGIVYAMFDGQFRKGLKQFGFQVSGLLFIAIWNVIGTSLICILIRRVVTLRMEEEELKIGDDAVHGEEAYAVWGDGDRISSTIRLRASRVPSVSRGDD 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 33383012 33384637 + Bma014157.1 Bma15g00927 97049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00927 470 PANTHER AMMONIUM TRANSPORTER MEP2 5 467 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bma15g00927 470 Pfam Ammonium Transporter Family 26 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bma15g00927 470 Gene3D Ammonium transporter AmtB like domains 8 460 IPR029020 -
Bma15g00927 470 TIGRFAM amt: ammonium transporter 24 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bma15g00927 470 PANTHER AMMONIUM TRANSPORTER 5 467 - -
Bma15g00927 470 PRINTS Rhesus blood group protein signature 125 141 IPR002229 GO:0005887
Bma15g00927 470 PRINTS Rhesus blood group protein signature 219 237 IPR002229 GO:0005887
Bma15g00927 470 PRINTS Rhesus blood group protein signature 250 272 IPR002229 GO:0005887
Bma15g00927 470 SUPERFAMILY Ammonium transporter 19 424 - -
Bma15g00927 470 ProSitePatterns Ammonium transporters signature. 180 205 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00340 Bma-Chr10:3212655 Bma15g00927 Bma-Chr15:33383012 6.91E-180 dispersed
Bma15g00616 Bma-Chr15:7829645 Bma15g00927 Bma-Chr15:33383012 0 dispersed
Bma15g00927 Bma-Chr15:33383012 Bma02g00930 Bma-Chr2:49092498 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00927 K03320 - zju:107406851 701.434