Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00956 ATGGCGAATAATTCATTCGAGGGAGGGATTCCAGAAGAAATAAAAAAATGTAGCTCCCTGACTGTTGTTGATTTTGAAGGAAATCGCTTTGCTGGGGAGATTCCGGCGTTCTTTGGGGAAATGAGAGGCTTGAATGCGCTGATTCTGGGGAGAAACCAGTTTGTGGGAGCCATTCCAGAGAGCTTTCGCAATCTCTTGGAGCTTAAAAGCTTGGATTTGGGAGGAAATAGTTTGAGTGGGTGCTTTCCTCAGGTTTTAATGGGGTTGAAAAATCTGACCTTTATCGATCTCAGCAGGAACAATTTGAGCTGTGAAATTCCAACAGGCATTGGGAATCTAACTAGGCTGGTAAATCTGAATCTAAGTGCAAATGGCTTTTCCGGGGAGATTCCGGCCAGCTTGGGAAACCTTTTATTGTTAACTACTCTTGATTTGAGCAGACAGAAATTTTCGGGTAAGTTGCCATCCGAGATTTTCGGTCTGCCAAATGCGCAGGTAATAGCTCTCCAGGAGAACATGTTATCTGGCGATGTTCCTGAAGGATTCAGTAGTTTGATGAGTCTGTGCAGTTTGAATCTCAGTTCAAATCACTTTTCTGGTCCCATTCCCGCTTATTATGGGTTTCTCCCATCACTGACCGTTCTCTCGTTATCCGGCAATAACATAACGGGGACTATTCCACCGGAGCTCGGCAACTGCTCAAGCCTCCAAGTTTTTGAGGCTCGATTCAACTCGTTGACCGGAAACATTCCGGAGAATCTCTCGCAGCTATTTCGTTTAAAGGAGCTTGATTTGGGTCATAATAATTTGACAGGGGAAATTCCAGAGGAAATTTCCAGTTGCTTGTCATTAAACACTCTGCTGCTGGACTCAAATGATCTATCAGGTACCATTCCAAGCTCCTTGTCCAAGCTTTCAAACCTCACAACGTTAGACCTCTCTTTTAACAATTTGAGTGGGGAAATTCCCGCTAATATTAGCTCCATTAGTGGATTGGTGAACTTTAATGTCGCAAATAACGATCTTGAAGGCGAGATTCCCGCGCCTTTAGGTTCTCGATTTGATAATTCATTATTATTTGCGGGAAATTCAAAGTTATGCGGGAAGCCATTGGACCAAAAATGTGATAAAAAGGATAGAAGAAAGAAGCTCATTCTGTTAATTGCAGTGGCTGCTAGTGGAGCTATCCTACTGTCAGTGTGTTGTTGCTTTTACATTTTTAGTCTCTTAATTTGGTGGAAGAGGCTGAAAGAGGGGGTGTATGGGGAGAAGAAGAGGAGCCCTGGAAGGACCAGCATCGGAGCTAGTAGTGGGCGTGGAAGCACCGACAGTGATGGACCGAAAGTTCTCATGTTTGTTAACAAAATCACTCTCGCAGACACAATTGAAGCGACTCGGCATTTCGATGAAGAGAATGTTCTTAGTAGAACTCGATATGGGCTGGTTTTCAAAGCTAGCTACAACGATGGAATGGTGCTCTCGATTCGCCGCCTCCCAAATGGGTCTCTGAGCGAAAATGTGATCAGAAAAGAAGCCGAATTATTGGGTAAAGTGAAGCATCGAAATCTAACTGTTCTTCGCGGATACTATGCAGGGCCGGATTTGAAACTTCTCATATATGACTACATGCCGAATGGAAATCTTGCAACTCTTCTTCAAGAAGCCTCCCACCAAGATGGCCATGTTCTGAATTGGCCGATGCGACACCTTATTGCCCTCGGAATTGCTCGCGGTCTGGCTTTCCTCCACTCGTCCTCCATTGTCCATGGCGATGTTAAGCCACAAAACGTTCTGTTCGATGCTGATTTCGAGGCCCATTTGTCTGATTTTGGGCTAGATAGGCTAATGGTTGCAGCTCCGGCTGAAGCTTCTTCCTCCACCTCGGTTGGCACATTGGGCTATGTTTCTCCTGAATTAGCTCTTACAGGGGAACCCACAAAGGAATCAGATGTCTACAGCTTTGGAATCGTCTTGCTTGAGCTGTTGACAGGGAAAAGACCAGTGATGTTTGGAGAAGATGAAGATATCGTGAAGTGGGTGAAGAAACAACTGCAAAGTGGTCAGATCAATGAGCTTTTGGAGCCCGGGTTGCTTGAGCTAGACCCTGAATCATCAGAGTGGGAGGAGTTTTTGCTAGGCGTTAAAGTTGGGTTACTTTGTACTGCACCAGAGCCTCTTGATCGGCCGACCATGACCGATATAGTTTTCATGTTGGAAGGTTGCCGTGTCGGACCTGAAATTCCGTCCTCGACCTATCCAACCAATCAACCTTCTCCTACATGA 2283 45.34 MANNSFEGGIPEEIKKCSSLTVVDFEGNRFAGEIPAFFGEMRGLNALILGRNQFVGAIPESFRNLLELKSLDLGGNSLSGCFPQVLMGLKNLTFIDLSRNNLSCEIPTGIGNLTRLVNLNLSANGFSGEIPASLGNLLLLTTLDLSRQKFSGKLPSEIFGLPNAQVIALQENMLSGDVPEGFSSLMSLCSLNLSSNHFSGPIPAYYGFLPSLTVLSLSGNNITGTIPPELGNCSSLQVFEARFNSLTGNIPENLSQLFRLKELDLGHNNLTGEIPEEISSCLSLNTLLLDSNDLSGTIPSSLSKLSNLTTLDLSFNNLSGEIPANISSISGLVNFNVANNDLEGEIPAPLGSRFDNSLLFAGNSKLCGKPLDQKCDKKDRRKKLILLIAVAASGAILLSVCCCFYIFSLLIWWKRLKEGVYGEKKRSPGRTSIGASSGRGSTDSDGPKVLMFVNKITLADTIEATRHFDEENVLSRTRYGLVFKASYNDGMVLSIRRLPNGSLSENVIRKEAELLGKVKHRNLTVLRGYYAGPDLKLLIYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIVHGDVKPQNVLFDADFEAHLSDFGLDRLMVAAPAEASSSTSVGTLGYVSPELALTGEPTKESDVYSFGIVLLELLTGKRPVMFGEDEDIVKWVKKQLQSGQINELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPEPLDRPTMTDIVFMLEGCRVGPEIPSSTYPTNQPSPT 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 36137684 36139966 - Bma014216.1 Bma15g00956 97078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00956 760 Gene3D Transferase(Phosphotransferase) domain 1 543 746 - -
Bma15g00956 760 Pfam Leucine rich repeat 140 198 IPR001611 GO:0005515
Bma15g00956 760 Pfam Leucine rich repeat 42 102 IPR001611 GO:0005515
Bma15g00956 760 Pfam Leucine Rich Repeat 259 281 IPR001611 GO:0005515
Bma15g00956 760 SMART LRR_sd22_2 65 91 - -
Bma15g00956 760 SMART LRR_sd22_2 257 280 - -
Bma15g00956 760 SMART LRR_sd22_2 305 334 - -
Bma15g00956 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Bma15g00956 760 ProSiteProfiles Leucine-rich repeat profile. 259 281 IPR001611 GO:0005515
Bma15g00956 760 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 1 756 - -
Bma15g00956 760 SMART serkin_6 468 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00956 760 Pfam Protein kinase domain 478 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00956 760 PRINTS Leucine-rich repeat signature 305 318 - -
Bma15g00956 760 PRINTS Leucine-rich repeat signature 260 273 - -
Bma15g00956 760 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 756 - -
Bma15g00956 760 Gene3D Phosphorylase Kinase; domain 1 441 542 - -
Bma15g00956 760 MobiDBLite consensus disorder prediction 424 443 - -
Bma15g00956 760 Gene3D Ribonuclease Inhibitor 1 379 IPR032675 -
Bma15g00956 760 SMART LRR_typ_2 305 329 IPR003591 -
Bma15g00956 760 SMART LRR_typ_2 257 281 IPR003591 -
Bma15g00956 760 SMART LRR_typ_2 65 88 IPR003591 -
Bma15g00956 760 SMART LRR_typ_2 209 233 IPR003591 -
Bma15g00956 760 SMART LRR_typ_2 89 113 IPR003591 -
Bma15g00956 760 SUPERFAMILY RNI-like 2 353 - -
Bma15g00956 760 Pfam Leucine Rich repeat 305 321 IPR001611 GO:0005515
Bma15g00956 760 Pfam Leucine Rich repeat 210 224 IPR001611 GO:0005515
Bma15g00956 760 ProSiteProfiles Protein kinase domain profile. 468 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g00956 760 SUPERFAMILY Protein kinase-like (PK-like) 448 751 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00969 Bma15g00956 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00737 Bma-Chr1:6741667 Bma15g00956 Bma-Chr15:36137684 9.08E-08 dispersed
Bma03g00969 Bma-Chr3:10281854 Bma15g00956 Bma-Chr15:36137684 9.40E-36 dispersed
Bma15g00956 Bma-Chr15:36137684 Bma15g00826 Bma-Chr15:20290663 1.30E-25 dispersed
Bma07g01340 Bma-Chr7:48930728 Bma15g00956 Bma-Chr15:36137684 1.22E-20 transposed
Bma13g00657 Bma-Chr13:16227782 Bma15g00956 Bma-Chr15:36137684 6.02E-06 transposed
Bma15g00956 Bma-Chr15:36137684 Bma09g00155 Bma-Chr9:5397708 5.45E-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66964 PF00069 Pkinase 6.00E-35 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00956 - - qsu:111996684 1071.61