Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g00973 ATGGCTGGGTTTTTCTCGCTAGGCGGAGGAAGAGGATCAACAAGTAACCAGAATCAACAACAAACAAACCCTACGAACGAAATTAATCCAGAGAGTTTGTTTTGGTACAGAAACAGCGATGATGTACCATCTTACAGAAGCTTCGAGCTATGGCAAAATCAGAATCTCTACTCTTTGGGAGTGGGTCCAAGCCGGAGCGTTCTGAACACCTCCGATGCGTATCCGGCGAGATCGTCGCTCCTGATGACGATGTCGTCCGACGGAGGTTCGATGAGTTGCCAAGATTGCGGGAATCGGGCCAAAAAGGATTGCGTCCACATGCGATGTAGAACATGTTGTCAAAGCCGAGGACTCGACTGCCAAACCCACCTCAAAAGCACTTGGGTTCCGGCCGCTAAGCGCCGCGAGCGGCAAGCTCAGCTGGTGGCCAACTTGCAAAATCAAGGCCAGGGAGCGAATTCGAAGCGGTTCAGAGAGAATCCATCGTCTTCTTCCTCGCTAGCCTGCACTCGTATACCCTCTAACGCATCTGGTAAATCCTCATCGGGGGGAGCTTTTCCGGCGGAAGTGACCTCGTCGGCGGTTTTTCGGTGCGTTCGAGTGAGCTCAATGGAACATCCGGACGAGCAGTACGCGTATCAGACAGCTGTGAACATCGGCGGCCATGTTTTCAAAGGCATTCTCTACGACCAAGGGCCGGAGATCGTAAACTACATTCCCAGAGAGAGCTCCTCCGGCGGAAGTGGACTCCAACCGCTAAACTTCATCCCCGCAGGAGCCACAACCACCGCCTCTGCAACCAGTACGAGTGGAGTTGCCGGTGCTTTGTTGGATCCTACTCTATACCCTACTCATCTCAGTACTTACATTTCTGGTACGCAATTCTTCCTTCCCCCAAGACCTTGA 906 52.65 MAGFFSLGGGRGSTSNQNQQQTNPTNEINPESLFWYRNSDDVPSYRSFELWQNQNLYSLGVGPSRSVLNTSDAYPARSSLLMTMSSDGGSMSCQDCGNRAKKDCVHMRCRTCCQSRGLDCQTHLKSTWVPAAKRRERQAQLVANLQNQGQGANSKRFRENPSSSSSLACTRIPSNASGKSSSGGAFPAEVTSSAVFRCVRVSSMEHPDEQYAYQTAVNIGGHVFKGILYDQGPEIVNYIPRESSSGGSGLQPLNFIPAGATTTASATSTSGVAGALLDPTLYPTHLSTYISGTQFFLPPRP 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 37616023 37617305 + Bma014248.1 Bma15g00973 97095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g00973 301 PANTHER PROTEIN SHORT INTERNODES 1 297 - -
Bma15g00973 301 MobiDBLite consensus disorder prediction 1 30 - -
Bma15g00973 301 Pfam Domain of unknown function (DUF702) 90 234 - -
Bma15g00973 301 MobiDBLite consensus disorder prediction 9 30 - -
Bma15g00973 301 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 297 IPR007818 GO:0003700|GO:0006355
Bma15g00973 301 MobiDBLite consensus disorder prediction 145 187 - -
Bma15g00973 301 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 185 233 IPR006511 -
Bma15g00973 301 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 92 134 IPR006510 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00977 Bma15g00973 CCT
Bma03g00977 Bma15g00973 ECH
Bma09g00096 Bma15g00973 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00741 Bma-Chr1:6793248 Bma15g00973 Bma-Chr15:37616023 1.76E-82 dispersed
Bma03g00977 Bma-Chr3:10398751 Bma15g00973 Bma-Chr15:37616023 1.86E-86 dispersed
Bma04g00224 Bma-Chr4:1914050 Bma15g00973 Bma-Chr15:37616023 3.28E-84 dispersed
Bma05g00149 Bma-Chr5:4476375 Bma15g00973 Bma-Chr15:37616023 1.94E-75 dispersed
Bma14g00754 Bma-Chr14:8388277 Bma15g00973 Bma-Chr15:37616023 4.76E-46 dispersed
Bma01g02345 Bma-Chr1:81040150 Bma15g00973 Bma-Chr15:37616023 4.43E-78 wgd
Bma15g00973 Bma-Chr15:37616023 Bma09g00096 Bma-Chr9:2564937 3.00E-136 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58518 PF05142 DUF702 4.00E-61 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g00973 - - jre:108993505 320.472