Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g01003 AGATCGGAAATGGTTTCTTCTCCTGAGACTGCTCCGTCGCCCGACTCCTCTTCTTCGCAGGAATCTCCTCCGCCGCCGCCTAGTGAGTCTGCCGAATCACCCCCTCCTCAATCTTCTACGCCTCCGCCACCTTCAGCCAAATCGCCTCCTCCACCGCCCCAAAATGACTCCGACTACTCTTCTCCGCCTGCACCACCGCCGCCTCCTCCTCCTCAATCTTCTTCGTCATCTTCTTCCTCCAAATCATTATCTCCTCCCCCTCCACCATCTGCGTCATCTACATCAAGTCAATCATCGTCTTCAAATCAAAACCTACCAGTTATAATTGGTGTAGCAGCTGGAGTGGGTCTTTTGGTCATCGCAATGCTTATAATCTGCGTAATGTGTTCGAGGAAAAAAAGAAAGCAAGATAAAATGCAATATTACAGAGACTCCGGCGAAGGTGGCAAGAATGGCGATTATTACAACAATTCAATGCAACAAAACTGGCACGGAAGCGACCATTTCGCGAGGCTTACGTCTCCGCCTGGTGCGAGCGGGTCATTGGGAGGCCCGTGGCCAGCACCTCCCCCGCCTCCGCCCATGGGATTTAGCGGCGAAACCAGCTCAAATTACTCAGGCCCGAGGCAAATGCCTCTCCCGCCACCGTCTCCGAACCTCGCGCTAGGGTTCAACAAGAGCACGTTCACCTACGACGAGCTGGCGGCGGCGACCGGTGGATTTGCGCAGGTAAATCTGCTTGGGCAAGGTGGATTTGGGTTTGTTCATAAGGGTGTTCTTCCCAATGGGAAAGAAATCGCTGTGAAGAGCCTGAAATCTGGGAGTGGACAAGGGGAGAGAGAATTTCAGGCGGAAGTTGAAATCATTAGCAGAGTTCATCATCGTCATCTTGTTTCTCTTGTTGGGTATTGCATTGCCGGTGAACAGCGGATGCTGGTTTACGAATTTGTGCCCAACAAGACCTTAGAACATCACCTCCATGCAAAGAATCTTGCCACCATGGACTTGCCCACCAGGCTTCGTGTTGCCATTGGATCTGCCAAAGGGCTTGCCTATCTTCACGAAGACTGCCATCCTCGGATTATACATCGTGACATAAAATCTGCAAATATTCTCCTCGACTACAACTTTGAAGCCATGGTGGCTGATTTCGGATTGGCTAAGCTTTCTTCCGATAATTACACTCACGTGTCTACAAGAATCATGGGCACATTCGGGTATCTGGCTCCGGAATATGCGTCGAGTGGGAAATTGACAGAGAAATCTGATGTTTTCTCATTTGGGATCATGCTGTTGGAGCTCATAACTGGAAAAAGACCAGTAGATCCAACTAATGCAATGGAGGATAGCTTAGTTGACTGGGCTCGACCTCTTTTGAGCCGGGCACTCGAGGAAGGGAACTTTGCCGAGCTGGTCGATATTCGCTTAGAAAATAACTTCAACCCTCAAGAGATGGCCAGAATGGTTGCTTGTGCTGCAGCTAGCATTCGCCATTCTGCCCGAAAGCGCCCACGAATGTGCCAGATCGTAAGAGCATTAGAAGGAGATGTGTCATTGGACGACTTGAAAGACGGTGGCGGGAGGCTAGGAGAGAGCTCGACATTCACCTCAAACATAAGCTCATCGGAGTACGACACAAGGACGTATAACACGGACATGGCAAAGTTTAGGCAGATGGCGCTGTCAAGCCAGGAGTTTGGGAGCAGTGAGCTTGGGACTTCCAGCAGTGACTCAGGCAACCAAAAACAGTACTATTGA 1758 50.51 RSEMVSSPETAPSPDSSSSQESPPPPPSESAESPPPQSSTPPPPSAKSPPPPPQNDSDYSSPPAPPPPPPPQSSSSSSSSKSLSPPPPPSASSTSSQSSSSNQNLPVIIGVAAGVGLLVIAMLIICVMCSRKKRKQDKMQYYRDSGEGGKNGDYYNNSMQQNWHGSDHFARLTSPPGASGSLGGPWPAPPPPPPMGFSGETSSNYSGPRQMPLPPPSPNLALGFNKSTFTYDELAAATGGFAQVNLLGQGGFGFVHKGVLPNGKEIAVKSLKSGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGEQRMLVYEFVPNKTLEHHLHAKNLATMDLPTRLRVAIGSAKGLAYLHEDCHPRIIHRDIKSANILLDYNFEAMVADFGLAKLSSDNYTHVSTRIMGTFGYLAPEYASSGKLTEKSDVFSFGIMLLELITGKRPVDPTNAMEDSLVDWARPLLSRALEEGNFAELVDIRLENNFNPQEMARMVACAAASIRHSARKRPRMCQIVRALEGDVSLDDLKDGGGRLGESSTFTSNISSSEYDTRTYNTDMAKFRQMALSSQEFGSSELGTSSSDSGNQKQYY 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 38971692 38974282 + Bma014286.1 Bma15g01003 97125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g01003 585 Gene3D Phosphorylase Kinase; domain 1 219 316 - -
Bma15g01003 585 ProSitePatterns Protein kinases ATP-binding region signature. 247 269 IPR017441 GO:0005524
Bma15g01003 585 MobiDBLite consensus disorder prediction 1 102 - -
Bma15g01003 585 Pfam Protein tyrosine and serine/threonine kinase 245 512 IPR001245 GO:0004672|GO:0006468
Bma15g01003 585 Gene3D Transferase(Phosphotransferase) domain 1 317 523 - -
Bma15g01003 585 ProSiteProfiles Protein kinase domain profile. 241 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g01003 585 MobiDBLite consensus disorder prediction 1 17 - -
Bma15g01003 585 MobiDBLite consensus disorder prediction 182 197 - -
Bma15g01003 585 MobiDBLite consensus disorder prediction 18 74 - -
Bma15g01003 585 SUPERFAMILY Protein kinase-like (PK-like) 216 513 IPR011009 -
Bma15g01003 585 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 6 572 - -
Bma15g01003 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Bma15g01003 585 MobiDBLite consensus disorder prediction 565 585 - -
Bma15g01003 585 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 6 572 - -
Bma15g01003 585 SMART serkin_6 241 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g01003 585 MobiDBLite consensus disorder prediction 170 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00474 Bma-Chr5:17633591 Bma15g01003 Bma-Chr15:38971692 0 dispersed
Bma11g00518 Bma-Chr11:6483183 Bma15g01003 Bma-Chr15:38971692 0 dispersed
Bma15g00184 Bma-Chr15:1925429 Bma15g01003 Bma-Chr15:38971692 3.11E-156 dispersed
Bma15g01003 Bma-Chr15:38971692 Bma03g00549 Bma-Chr3:4513517 1.14E-93 dispersed
Bma15g01003 Bma-Chr15:38971692 Bma09g00074 Bma-Chr9:1824425 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66965 PF07714 PK_Tyr_Ser-Thr 6.60E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g01003 - - rcu:8273399 711.064