Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g01025 ATGTCAGCCATGGAGACCTGTCCAGTAGAAGTTCATGATGTTGAGATGAAAACTAGCCATGCTGAAAGGGCTGAATGGGTAATGAATCCACCCGAGCCTCCAGGTCTCTGCTGCGAGCTGATGAATTCCCTGCGGGAAACCATTTTACCCCATCCGAACAAGCTCTCTTTTCGATCACGGACTGGAAAAAGATCTGCCGGCTCTGCGCTCGGAGAAATATTTCCCATTCTCTGCTGCTGCCAAAATTACAATTTGGCAAAATTCAAGAAGGATTTGCTGGCAGGTTTAACTCTTGCAAGCCTTTGTATTCCACAGAGTATTGGGTATGCATCATTAGCAAAGCTTGATCCTCAATATGGCCTGTACACAAGTGTCGTCCCACCACTTATTTACGCTATCATGGGGACTTCGGGGGAAATATCGATCGGTCCGGTTGCTGTTGTTTCTCTACTTTTAGCCTCCATGACCCAGAATTTACAAGACCCTTTGGCTGATCCACTTGCTTATAGAAAGCTTATTTTGACAGCAACATTCTTTGCTGGTGTCTTTCAAGCAACCTTTGGACTCTTCAGGTTGGGATTTCTGGTGGATTTTCTCTCCCATGCAGCCATAGTAGGATTCATGGCAGGTGCAGCCATTATCATTGGTCTTCAACAGCTCAAAGGGCTGCTTGGAATTGCTCATTTTTCCAACAAAACTAACGTCATATCCGTCCTTGAAGCTGTTTGGGAGTCTTTCCACCACCCTGTAATTGCTTTGAATTTACAGTGGAATCCTTACAATTTCATCCTCGGCTGTGCGTTCTTCTGCTTTATCCAGATCGCTAGATTTCTGGGTACCAAATACAAGAAATTCCTCTGGTTGCAAGCCCTTTCTCCTCTGTTATCTGTAATTTTGTCCACCATCATTGTTTTCCTGACAAGGGCAGATAAGTATGGAGTTACAATTGTGAGACACATACCAAAAGGCTTGAATCCAGTTTCAGTTCATCAGTTAGAGCTTAACAGTCCTTACAGTGGAGAGATTGCCAAGATAGGATTCATTTCTGCCATAGTTGCCCTCACCGAAGCAATTGCAGTAGGAAGATCATTTGCTTCCATAAAAGGATATCACCTTGATGCAAACAAAGAACTGGTTGCTGCAGGCTTCATGAACATTGCAGGATCTTTTACTTCTTGCTATGTAGCAACTGGGTCTTTTTCAAGAACTGCAGTAAATTTCAGTGCTGGGTGTGAAACAGTGGTATCAAACATAGTGATGGCCATAGCAGTGCTCATATCATTGGAACTATTCACTCAACTCTTGTACTTTACTCCAACTGCAATTCTAGCTTCCATTATCCTCTCTGCTCTTCCTGGCCTCGTCAACCTTCATGAAGCTCATCACATATGGAAGGTTGATAAGCTAGACTTCTTTGCCTGCATGGGGGCTTTCCTAGGAGTCTTGCTTGTATCAGTAGAGATTGGCTTACTAACCTCAGTGATGATATCTTTTCTGAAGATAATACTTATATCCATTCAATCCGGAACAGAAACTCTTGGAAGAATCAATGGAACCGATATGTTCTGTGACGTTAATCAATATCCTATGGCAGTAAGGACACCAGGAGTTCTTGTAATCCGTCCAAAGTCTTCCTTCATTTGCTTTGCTAATGCTAATTCCTTCAGAGAAAAAATTCTAAGATGGGTGACGGAAGCAGAAGAGTCTTGCAGCAAGGGAGGACCCATAACAACAAGGAATATAAATCAAGTAGTAGTGGACATGTCCAACTTGATGAACATCGATACATCAGGGGTTGCTTCATTGGAGGAATTGCACAAGAAACTGGCCTCCCTCGGCACTGAGCTAGCCTTTGCCAATCCTAAGTGGCAGGTGATACACAAGCTTAAGGTAGCCAACAAATTTGGAGGAATAATTTTCTTCACCGTCGGAGAAGCCATGGACGCACACCTACGCACTAAAATTGCTACCATCTAA 1977 43.45 MSAMETCPVEVHDVEMKTSHAERAEWVMNPPEPPGLCCELMNSLRETILPHPNKLSFRSRTGKRSAGSALGEIFPILCCCQNYNLAKFKKDLLAGLTLASLCIPQSIGYASLAKLDPQYGLYTSVVPPLIYAIMGTSGEISIGPVAVVSLLLASMTQNLQDPLADPLAYRKLILTATFFAGVFQATFGLFRLGFLVDFLSHAAIVGFMAGAAIIIGLQQLKGLLGIAHFSNKTNVISVLEAVWESFHHPVIALNLQWNPYNFILGCAFFCFIQIARFLGTKYKKFLWLQALSPLLSVILSTIIVFLTRADKYGVTIVRHIPKGLNPVSVHQLELNSPYSGEIAKIGFISAIVALTEAIAVGRSFASIKGYHLDANKELVAAGFMNIAGSFTSCYVATGSFSRTAVNFSAGCETVVSNIVMAIAVLISLELFTQLLYFTPTAILASIILSALPGLVNLHEAHHIWKVDKLDFFACMGAFLGVLLVSVEIGLLTSVMISFLKIILISIQSGTETLGRINGTDMFCDVNQYPMAVRTPGVLVIRPKSSFICFANANSFREKILRWVTEAEESCSKGGPITTRNINQVVVDMSNLMNIDTSGVASLEELHKKLASLGTELAFANPKWQVIHKLKVANKFGGIIFFTVGEAMDAHLRTKIATI 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 40744562 40748356 - Bma014320.1 Bma15g01025 97147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g01025 658 ProSiteProfiles STAS domain profile. 547 633 IPR002645 -
Bma15g01025 658 CDD STAS_SulP_like_sulfate_transporter 528 639 - -
Bma15g01025 658 TIGRFAM sulP: sulfate permease 75 636 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma15g01025 658 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 13 656 - -
Bma15g01025 658 Pfam STAS domain 528 646 IPR002645 -
Bma15g01025 658 PANTHER SULFATE TRANSPORTER 13 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma15g01025 658 Gene3D STAS domain 509 653 IPR036513 -
Bma15g01025 658 Pfam Sulfate permease family 88 475 IPR011547 GO:0016021
Bma15g01025 658 SUPERFAMILY SpoIIaa-like 532 649 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00847 Bma-Chr1:8011357 Bma15g01025 Bma-Chr15:40744562 0 dispersed
Bma01g00871 Bma-Chr1:8168212 Bma15g01025 Bma-Chr15:40744562 8.58E-107 dispersed
Bma15g01025 Bma-Chr15:40744562 Bma15g00623 Bma-Chr15:7974865 0 dispersed
Bma15g01025 Bma-Chr15:40744562 Bma01g02625 Bma-Chr1:83812419 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g01025 K17469 - qsu:112024949 884.019