Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g01079 ATGCCACCAGCAGTATCTGCAGCAGGTAGCCATGAACAGCCAGAGAAAGCTTATGGATGGGCTGCAAGAGATTTCTCCGGAATTCTTTCCCCTTTCCAGTTCCAACGAAGGGCTAATGGCGAAAATGATATCACCATCAACATACTCTACTGTGGAATTTGTTATTCCGATCTTTTTTTCGCCAAGGATAAAGCAAAAATGACCCCCTATCCTTTTGTTCCTGGGCATGAAATAGTAGGAGAAGTGACAAAAGTAGGAAACCAGGTGAGAAAATTCAAAGTGGGAGACAAAGCAGGGGTCGGATGCTTCGTCGGATCTTGCAGAAAATGCGAGAATTGCGCGCACGATTTGGAAAACTACTGCCCTGAATCCATTTGGACGATCGTCGGAGTTGATAAAGACGGTCAGAAAAGCTATGGAGGATTCTGCGACAAGATTGTCGTCGACGAGCATTTCGCAGTGACAATTCCAGACGGGGTTTCTTTACCTGGAGCTGCTCCATTGCTTTGCGCAGGAATCACAGTCTATAGCCCCATGAAATTTTACGGTCTGTGTTAA 558 45.88 MPPAVSAAGSHEQPEKAYGWAARDFSGILSPFQFQRRANGENDITINILYCGICYSDLFFAKDKAKMTPYPFVPGHEIVGEVTKVGNQVRKFKVGDKAGVGCFVGSCRKCENCAHDLENYCPESIWTIVGVDKDGQKSYGGFCDKIVVDEHFAVTIPDGVSLPGAAPLLCAGITVYSPMKFYGLC 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 43134402 43135140 - Bma014395.1 Bma15g01079 97201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g01079 185 PANTHER ALDEHYDE REDUCTASE 8 184 - -
Bma15g01079 185 Gene3D - 171 183 - -
Bma15g01079 185 Pfam Alcohol dehydrogenase GroES-like domain 42 155 IPR013154 -
Bma15g01079 185 Gene3D - 37 170 - -
Bma15g01079 185 PANTHER - 8 184 - -
Bma15g01079 185 SUPERFAMILY GroES-like 24 180 IPR011032 -
Bma15g01079 185 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01051 Bma-Chr7:42237598 Bma15g01079 Bma-Chr15:43134402 1.19E-45 dispersed
Bma14g00086 Bma-Chr14:1203837 Bma15g01079 Bma-Chr15:43134402 1.41E-51 dispersed
Bma15g01079 Bma-Chr15:43134402 Bma03g01194 Bma-Chr3:17950504 2.81E-77 wgd
Bma15g01079 Bma-Chr15:43134402 Bma06g00315 Bma-Chr6:5280906 6.92E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g01079 - K23232 pavi:110772154 262.692