Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g01096 ATGAATCCTCTCAAATGGGAAAAATCCATCCTTCTGTTTGTTTTCTTCTTCTTCTTCCAGCTTCTAGCTATGGTGGTTTCTCTGGGCAACGACTACGAGATTCTCCTGCGGGTCAAGAATTCTCTGCTGGACGATCCCACCGGCAGTCTTCAGGATTGGGTTCCGAACGCTGAGAAGAATCCCTGCAGTTGGAGCGGCGTTGGCTGCGATTCTCCCAATAGTTCTGTTGTTTCAATCGATCTATCCAGTCTTGCCATCGGCGGTGGGATTCCGTTTGATTTCTGCCGGATTTTGACCTTGCAGAATCTGTCTCTCGCCGACAATAACATCAATGGCTCGCTGTTGTCCCACTCTCTCACTCTCTGTTCAAACCTGCGTCTATTGAACCTCACCAGTAACCTTCTCGTCGGCGAATTGCCGGAGTTTTCGCCGGGATTTGGTGAACTGCTGATTCTGGATCTCTCCAGCAACAACTTCACCGGAGATATTCCGGCCAGTTTCGGCCGATTTCCGGAGCTACGTGGTCTATTTCTCGCCCAGAACTTGATCAATGGCTCCTTTCCTTCGTTCTTATGCAATCTCACCAAGTTAACTCGGCTAGAGCTCTCGTACAATCCTTACATGGCCGGTCCTTTACCTTTGGACATCGGGAATCTCACCATGCTTGAAAATCTGTTTGTACAGGTGACTAATCTCGTCGGAACTATCCCGGACTCGATCGGAAATCTTGTGTTGCTCCAGAAACTTGATCTATCCCAAAATTCTCTCTCCGGAGCAATTCCTTTTTCGATTGGCGGATTACTGAATGTGGTTCAGATGGAACTGTTCGAGAACCAACTCTCCGGTGAACTGCCGGCGAGCTTGGGGAATTTGTCTAACCTCCTTAGAATTGACCTCTCGCAAAACAATCTCACCGGAAAGTTGCCAGCCAACCTTGCTGGATTGCCGCTTGAGTCTTTGAATCTAAACGACAATTTTCTCATCGGTGAAATCCCATTTAGCTTAGCCTCTAGTCCTAATCTAGTACAACTGAAGCTTTTTAATAACAGCTTCTCCGGGGAATTACCGGAGTACCTCGGCCGGAATTCCGAACTGGAAGATTTCGATGTCTCCACCAACAGTTTCTCCGGTGGGTTACCGAAGTACCTCTGTTACAGGAAAAAGCTTCGACGCTTAGTCACTTTTAGCAACGGCTTCTCCGGAAGCTTGCCGGAATCTTATGGCGACTGCAGCGCTCTCTATTATGTGAGAATCGAGAACAACCAACTTTCTGGAGAAATTCCGGCCAGTTTCTGGAGCTTTCGTGGCCTCCAACACCTTCAGCTGGAAAATAATCGATTTGAAGGCCCTCTCTCACCTTCGATTTCTGGCGCTCGCGAACTCACCGCTTTTCTGATATCCGGTAACAACTTCTCCCGCGAATTGCCTCCAGAAATTTGCCAATTGGGTAAACTCGCACGTTTAGACGTGAGCAGAAACAGATTTTCCGGCGAAATTCCGTCGTGTATAACCGAACTGAAGAAACTGCAGACGCTTGATATGCAGGAGAACATGTTCGCCGGGGAGATACCGAAAACAGTAGTTTCTTGGCAAGAGTTGGCGGAGTTAAATCTTTCAAAAAATCGCTTGACCGGAGAGATTCCTTCCCAACTAGGAGATTTGCCGTCCTTAACGTACTTAGATCTGTCAGAAAATTTACTCACAGGGGAAATCCCATCGGAGTTGACGAAGCTGAATCTTAACCAGTTCAACTTATCGGGAAACAGACTATCCGGCGAAGTTCCTTCCGGTTTCATCAACGAACTGTATCTTCCGAGCCTAATGGGCAACCCGGATCTATGTAGCCCCGACTTGAACCCGCTACCTCTTTGCCCGAAGTCCAAACCCGCTTCTTTCTATATAGTAATTGTATTATCTATACTCGCTTTCCTCCTCGTCGGATCTCTCATGTGGGTCATCAAATCCAAGTGGCGGGTCTTCGCCGACAGATCAAAAAGCTCCTGGAAGGTCACCATTTTTCAGCGGCTCGGGTTCAACGAGGAAGACATTATTCGTAATCTAACAGCTCAGAACTTGATCGGAGAAGGAGGGTCTGGCCGTGTCTACAAAGTGAAGCTCAAAACCGGTCAGACGGTAGCTGTGAAAAGATTATGGGGAGGAAATAAAGAAGCCGACAATGAATCTGTCTTCAAATCGGAGCTGGAGACTTTGGGCCGGATCCGCCATGGGAACATCGTGAAGCTTCTCCTCGGCTGCAGCTCCGTTGACGGAGATCGCATCCTGGTTTTCGAATACATGGAGAACGGAAGCTTAGGCGACGCATTGCATGGCGAAAAAGGAGGGGCTTTTCTGGATTGGCCGACGCGGTCAAGTATAGCAGTCGGTGCGGCTCAGGGATTGGCTTATCTGCATCATGACTGTGATCCGCCGATCGTTCATCGGGACGTGAAGAGCAATAACATACTTTTGGACGAGGAGTTTGTCCCCCGGGTGGCTGATTTCGGACTAGCCAAGACCTTGCAGCGGAAGGTGGGTGACGGCGGCGGCGATGGTCCAATGTCTCGAGTTGCAGGGTCGTACGGCTACATTGCTCCCGAGTATGGTTACACGATGAAAGTGAACGAGAAGAGCGACGTGTACAGCTTTGGAGTTCTGTTAATGGAGTTAGTGACCGGAAAGAGGCCGAACGACGGGTTGTTCGGGGAGAGCAAGGACATGGTGAAGTGGGTTGCAGAGGCAGCTTCGTCATCATCCTCGTCATCTTCATCGTCATTTTCAGAAGAAGAAGAAGAAGGGCGGCATGGAAGAAACTTGAATCAAATAATAGATCCAAAGCTGGGCCAGTCCAGCTGCAATTATGAAGAGATTGAGAAGGTCATAAATGTAGCTCTTCTCTGTACCTCTGCATTGCCCATCAACAGGCCGTCCATGAGAAAAGTGGTGGAGATGCTTAAAGACAAGAAGAGAAACCTCGTACCAAGTGATGAGCTTAAATGTTAA 3000 48.67 MNPLKWEKSILLFVFFFFFQLLAMVVSLGNDYEILLRVKNSLLDDPTGSLQDWVPNAEKNPCSWSGVGCDSPNSSVVSIDLSSLAIGGGIPFDFCRILTLQNLSLADNNINGSLLSHSLTLCSNLRLLNLTSNLLVGELPEFSPGFGELLILDLSSNNFTGDIPASFGRFPELRGLFLAQNLINGSFPSFLCNLTKLTRLELSYNPYMAGPLPLDIGNLTMLENLFVQVTNLVGTIPDSIGNLVLLQKLDLSQNSLSGAIPFSIGGLLNVVQMELFENQLSGELPASLGNLSNLLRIDLSQNNLTGKLPANLAGLPLESLNLNDNFLIGEIPFSLASSPNLVQLKLFNNSFSGELPEYLGRNSELEDFDVSTNSFSGGLPKYLCYRKKLRRLVTFSNGFSGSLPESYGDCSALYYVRIENNQLSGEIPASFWSFRGLQHLQLENNRFEGPLSPSISGARELTAFLISGNNFSRELPPEICQLGKLARLDVSRNRFSGEIPSCITELKKLQTLDMQENMFAGEIPKTVVSWQELAELNLSKNRLTGEIPSQLGDLPSLTYLDLSENLLTGEIPSELTKLNLNQFNLSGNRLSGEVPSGFINELYLPSLMGNPDLCSPDLNPLPLCPKSKPASFYIVIVLSILAFLLVGSLMWVIKSKWRVFADRSKSSWKVTIFQRLGFNEEDIIRNLTAQNLIGEGGSGRVYKVKLKTGQTVAVKRLWGGNKEADNESVFKSELETLGRIRHGNIVKLLLGCSSVDGDRILVFEYMENGSLGDALHGEKGGAFLDWPTRSSIAVGAAQGLAYLHHDCDPPIVHRDVKSNNILLDEEFVPRVADFGLAKTLQRKVGDGGGDGPMSRVAGSYGYIAPEYGYTMKVNEKSDVYSFGVLLMELVTGKRPNDGLFGESKDMVKWVAEAASSSSSSSSSSFSEEEEEGRHGRNLNQIIDPKLGQSSCNYEEIEKVINVALLCTSALPINRPSMRKVVEMLKDKKRNLVPSDELKC 999
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 43629790 43632865 + Bma014416.1 Bma15g01096 97218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g01096 999 ProSiteProfiles Protein kinase domain profile. 687 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g01096 999 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Bma15g01096 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Bma15g01096 999 Gene3D Ribonuclease Inhibitor 316 631 IPR032675 -
Bma15g01096 999 SMART LRR_typ_2 291 315 IPR003591 -
Bma15g01096 999 SMART LRR_typ_2 482 506 IPR003591 -
Bma15g01096 999 SMART LRR_typ_2 554 578 IPR003591 -
Bma15g01096 999 SMART LRR_typ_2 243 267 IPR003591 -
Bma15g01096 999 SUPERFAMILY L domain-like 317 622 - -
Bma15g01096 999 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 989 - -
Bma15g01096 999 Gene3D Ribonuclease Inhibitor 208 314 IPR032675 -
Bma15g01096 999 Pfam Protein kinase domain 690 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g01096 999 SUPERFAMILY RNI-like 75 392 - -
Bma15g01096 999 Pfam Leucine rich repeat 150 206 IPR001611 GO:0005515
Bma15g01096 999 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Bma15g01096 999 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 10 989 - -
Bma15g01096 999 Gene3D Ribonuclease Inhibitor 30 144 IPR032675 -
Bma15g01096 999 Gene3D Ribonuclease Inhibitor 145 207 IPR032675 -
Bma15g01096 999 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524
Bma15g01096 999 SMART serkin_6 687 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma15g01096 999 Gene3D Phosphorylase Kinase; domain 1 663 765 - -
Bma15g01096 999 Gene3D Transferase(Phosphotransferase) domain 1 766 996 - -
Bma15g01096 999 SUPERFAMILY Protein kinase-like (PK-like) 679 984 IPR011009 -
Bma15g01096 999 PRINTS Leucine-rich repeat signature 246 259 - -
Bma15g01096 999 PRINTS Leucine-rich repeat signature 554 567 - -
Bma15g01096 999 MobiDBLite consensus disorder prediction 917 941 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g01096 Bma-Chr15:43629790 Bma14g01968 Bma-Chr14:42581795 0 dispersed
Bma15g01094 Bma-Chr15:43526502 Bma15g01096 Bma-Chr15:43629790 0 proximal
Bma01g00209 Bma-Chr1:1865398 Bma15g01096 Bma-Chr15:43629790 3.22E-26 transposed
Bma02g00197 Bma-Chr2:1885280 Bma15g01096 Bma-Chr15:43629790 2.07E-41 transposed
Bma07g00406 Bma-Chr7:4940273 Bma15g01096 Bma-Chr15:43629790 0 transposed
Bma10g00709 Bma-Chr10:10776543 Bma15g01096 Bma-Chr15:43629790 0 transposed
Bma15g00434 Bma-Chr15:4712114 Bma15g01096 Bma-Chr15:43629790 4.96E-103 transposed
Bma15g01096 Bma-Chr15:43629790 Bma02g00096 Bma-Chr2:841950 1.24E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66969 PF00069 Pkinase 2.10E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g01096 - - csv:101219140 1199.5