Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g01097 ATGGACTCTGATGATAATTGCTGTAAAGGCCTTTTTCTAGCCTTAGGATTGGTCGGTGAAAAGGAAACCACTTCGAAAATCGCGAACCAAGCCCCGGGTTTGAAATCGAGCTTGAGTTTTATAGGCTCTAATGGCGGTTCTGAGCCGTCTTTGAGGTTGGGTCTTTCTGGTGATGGTTTGTGTAGGCAGGCTTCTCCCCTAAGTCCCGTTTCTTCTTTCTGTAGCGGTAGGGCTAAGAGAGACAGGGAATTTAGCAGTGAGGATGTGGAGGCGGAGAAAGTTTCTTCAAGAGTTAGTGATGAAGACGAAGATGGCTCTAATTACAGAAAGAAACTTCGCTTAACTAAAGAACAGTCTACTCTTTTAGAAGACAGCTTCAAAAAGCATAGCACTCTTAACCTAAAGCAAAAGCAAGCTTTAGCAAGAGAGCTAAATCTTCGACCTCGACAAGTTGAAGTTTGGTTTCAGAATAGAAGAGCCAGGACGAAGGTGAAGCAAACTGAGGTAGACTGTGAGTTATTGAAGAAATGCTGCGAGAATCTGGCGGAAGAAAACAGGAGACTGCAAAAGGAAGTAGAAGAGCTAAAAGCTGTGAAACGAGCTCCCCCATTTTACGTGCAAATTCCTGCAACTGCAGCGACGCTAAGTCTCTGCCCTTCTTGCGAAAGGGTCGGTAGAGACGGCCATGGAAGATCTGCAGCTAGTTCGTCTGAGCTACCATTTTCAGTGGCTTCTTCTTCTTCTAACCCTCATTTTTTTAACCCTTTCACCAACTCCTCTGCAGCCTGTTAA 792 45.08 MDSDDNCCKGLFLALGLVGEKETTSKIANQAPGLKSSLSFIGSNGGSEPSLRLGLSGDGLCRQASPLSPVSSFCSGRAKRDREFSSEDVEAEKVSSRVSDEDEDGSNYRKKLRLTKEQSTLLEDSFKKHSTLNLKQKQALARELNLRPRQVEVWFQNRRARTKVKQTEVDCELLKKCCENLAEENRRLQKEVEELKAVKRAPPFYVQIPATAATLSLCPSCERVGRDGHGRSAASSSELPFSVASSSSNPHFFNPFTNSSAAC 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 43737466 43738512 - Bma014417.1 Bma15g01097 97219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g01097 263 Pfam Homeodomain 109 163 IPR001356 GO:0003677
Bma15g01097 263 ProSitePatterns 'Homeobox' domain signature. 140 163 IPR017970 GO:0000981|GO:0006355
Bma15g01097 263 Pfam Homeobox associated leucine zipper 165 198 IPR003106 GO:0006355|GO:0043565
Bma15g01097 263 Coils Coil 171 201 - -
Bma15g01097 263 CDD homeodomain 109 166 IPR001356 GO:0003677
Bma15g01097 263 SUPERFAMILY Homeodomain-like 98 166 IPR009057 -
Bma15g01097 263 SMART halz 165 208 IPR003106 GO:0006355|GO:0043565
Bma15g01097 263 ProSiteProfiles 'Homeobox' domain profile. 105 165 IPR001356 GO:0003677
Bma15g01097 263 MobiDBLite consensus disorder prediction 85 106 - -
Bma15g01097 263 PANTHER - 6 263 - -
Bma15g01097 263 Gene3D - 102 170 - -
Bma15g01097 263 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT22-LIKE 6 263 - -
Bma15g01097 263 SMART HOX_1 107 169 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma15g00444 Bma-Chr15:4823091 Bma15g01097 Bma-Chr15:43737466 3.41E-57 dispersed
Bma11g00651 Bma-Chr11:11580372 Bma15g01097 Bma-Chr15:43737466 1.68E-32 transposed
Bma15g01097 Bma-Chr15:43737466 Bma03g01175 Bma-Chr3:17104644 1.44E-83 wgd
Bma15g01097 Bma-Chr15:43737466 Bma06g00325 Bma-Chr6:6236831 1.09E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58528 PF00046 Homeodomain 6.30E-16 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g01097 K09338 - tcc:18611354 308.531