Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma15g01111 | ATGGGGAAGAAGCAGCACAGTAAAGATCGGATGTACATCACCAAAACTGAGTGGGCTACTGAATGGGGTGGCGCCAAAGCCAAAGATACGCAAGCCCCCTTTAAACGCCTTCCCTTCTACTGCTGCGCGCTGACATTCACGCCGTTCGAAGACCCAGCGTGTACTGCCGATGGCAGTGTCTTTGATGTCATGCACATAATCCCTTATATCCGTAAGTATGGCAAACATCCGGTTACCGGAGTGCCACTGAAGCAGGTGGATCTCATCCCCCTAACTTTCCACAAGAATTCCGAAGGAGAGTATCATTGTCCTGTACTAAACAAGGTTTTTACGGAATTTACGCACATAGTTGCCGTGAAGACCACAGGAAATGTCTTTTGCTATGAGGCAATCAAAGAATTAAATATTAAGACAAAGAACTGGAAGGAGCTCCTTACTGATGAATCATTCACTATGAAAGACCTTATCACAATTCAGAATCCTAATGCCCTTGAAAGCAAGGCCCTTCTGGGATTTGATCATGTAAAAAATAATCTGAAAGTTGACGATGAAGAACTGAAGAAAATGAGTATAGATCCTGCCTATAATATTAACGTTTCTGGAGATATCAAGCAGATGCTTGAGGAGCTTGGAACTGCTAAAGGAAAGGAAACTGCCCTTCACGGAGGAGGTGGTAACAAGGCACAGAAAGAAAGGGCTGCTGCACTTGCTTCCATTTTAGCTGCAAGATCAAATATTAAAGAGGATTTAAATTCAAATGGAGAGGTCAATGCCCGCCAATCATACAGTATTGTAGATGCTGCATCTGCTTCAGTTCAAGGTAGAAGTGCTGCTGCTGCTAAAGCAGCATCAAGTGATAAAACTGCTGCTAGGATAGCTATGCACATGGCAGGTGAAAGAGCTCCTGTTAATGCAAAGATGGTAAAAAGTCGCTATACAACTGGTGCTGCTTCACGGTCCTTTACTTCAACATCTTATGATCCTGTTACTAAGAACGACTTTGAATACATAAAAGTTGAGAAGAATCCAGAGAAGAAAGGATATGTACAGTTGCATACCACACATGGAGATTTGAATATCCAGTTGCACTGTGATATTTCACCTAGAGCTTGTGAGAACTTCATCACTCTTTGTGAGCGCGGTTATTATGATGGCGTAGCTTTTCATAGAAGCATCCGGAATTTCATGATTCAAGGTGGTGATCCAACTGGAAGTGGGAAAGGAGGAGAATCTATTTGGGGAAAACCATTTAAAGATGAATTCAACTCTAAGTTGGTTCACTCTGGACGAGGTGTAGTCAGCATGGCGAACAGTGGTCCCCACACGAATGGTTCTCAGTTCTTTATCCTTTACAAATCTGCAAATCACTTAAACTTCAAGCATACAGTATTTGGTGGAGTTGTAGGTAACTTGACTACTCTGGCAGCCATGGAAAAGGTTCCAGTCGATGATGATGACCGACCTATGGAGGAAATTAAAATAACAAGTGTCACAATTTTTGTCAATCCTTACACAGAACCCGACGAAGAAGAGGAAGAAAAGGCAAAAGAAGAGAAGAATGCTCTGGATGAAGATAATGATAAAGTTGGATCATGGTATAGTAATCCCGGCACGGGAGCAGCGGATACCCAAGCGGTAAGCAGTGGCGGTGGTGGTGTTGGGAAATACTTGAAAGCTAGAAATGGCAAAGCTGAATCTTCCAAAGTTGAGGCAAGTAGTAAAGTAGAAGCAAATACTACAACAAAAAAGAGAAAAGTTGGAGTCTCCACGGCAGAATTCAAAGACTTCTCTTCATGGTAA | 1800 | 42.61 | MGKKQHSKDRMYITKTEWATEWGGAKAKDTQAPFKRLPFYCCALTFTPFEDPACTADGSVFDVMHIIPYIRKYGKHPVTGVPLKQVDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLTDESFTMKDLITIQNPNALESKALLGFDHVKNNLKVDDEELKKMSIDPAYNINVSGDIKQMLEELGTAKGKETALHGGGGNKAQKERAAALASILAARSNIKEDLNSNGEVNARQSYSIVDAASASVQGRSAAAAKAASSDKTAARIAMHMAGERAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNDFEYIKVEKNPEKKGYVQLHTTHGDLNIQLHCDISPRACENFITLCERGYYDGVAFHRSIRNFMIQGGDPTGSGKGGESIWGKPFKDEFNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGNLTTLAAMEKVPVDDDDRPMEEIKITSVTIFVNPYTEPDEEEEEKAKEEKNALDEDNDKVGSWYSNPGTGAADTQAVSSGGGGVGKYLKARNGKAESSKVEASSKVEANTTTKKRKVGVSTAEFKDFSSW | 599 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 44081255 | 44093981 | + | Bma014435.1 | Bma15g01111 | 97233 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma15g01111 | 599 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 383 | 400 | IPR020892 | GO:0003755|GO:0006457 | |
Bma15g01111 | 599 | MobiDBLite | consensus disorder prediction | 531 | 545 | - | - | |
Bma15g01111 | 599 | SUPERFAMILY | Cyclophilin-like | 348 | 509 | IPR029000 | - | |
Bma15g01111 | 599 | SMART | Ubox_2 | 39 | 101 | IPR003613 | GO:0004842|GO:0016567 | |
Bma15g01111 | 599 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 2 | 597 | IPR044666 | - | |
Bma15g01111 | 599 | Gene3D | - | 328 | 513 | IPR029000 | - | |
Bma15g01111 | 599 | SUPERFAMILY | RING/U-box | 37 | 104 | - | - | |
Bma15g01111 | 599 | Coils | Coil | 508 | 528 | - | - | |
Bma15g01111 | 599 | CDD | RING-Ubox_PPIL2 | 38 | 110 | IPR026951 | - | |
Bma15g01111 | 599 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 348 | 498 | IPR002130 | GO:0000413|GO:0003755 | |
Bma15g01111 | 599 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 352 | 499 | IPR002130 | GO:0000413|GO:0003755 | |
Bma15g01111 | 599 | PANTHER | RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 | 2 | 597 | - | - | |
Bma15g01111 | 599 | MobiDBLite | consensus disorder prediction | 504 | 588 | - | - | |
Bma15g01111 | 599 | ProSiteProfiles | U-box domain profile. | 35 | 108 | IPR003613 | GO:0004842|GO:0016567 | |
Bma15g01111 | 599 | MobiDBLite | consensus disorder prediction | 571 | 586 | - | - | |
Bma15g01111 | 599 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 362 | 377 | IPR002130 | GO:0000413|GO:0003755 | |
Bma15g01111 | 599 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 446 | 458 | IPR002130 | GO:0000413|GO:0003755 | |
Bma15g01111 | 599 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 431 | 446 | IPR002130 | GO:0000413|GO:0003755 | |
Bma15g01111 | 599 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 459 | 474 | IPR002130 | GO:0000413|GO:0003755 | |
Bma15g01111 | 599 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 388 | 400 | IPR002130 | GO:0000413|GO:0003755 | |
Bma15g01111 | 599 | CDD | cyclophilin_RING | 348 | 506 | - | - | |
Bma15g01111 | 599 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 40 | 96 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02208 | Bma-Chr1:78992186 | Bma15g01111 | Bma-Chr15:44081255 | 8.95E-47 | dispersed | |
Bma04g01568 | Bma-Chr4:51666081 | Bma15g01111 | Bma-Chr15:44081255 | 1.05E-48 | dispersed | |
Bma06g01227 | Bma-Chr6:49371933 | Bma15g01111 | Bma-Chr15:44081255 | 3.47E-38 | dispersed | |
Bma08g00813 | Bma-Chr8:45746917 | Bma15g01111 | Bma-Chr15:44081255 | 5.41E-33 | dispersed | |
Bma14g00417 | Bma-Chr14:4932265 | Bma15g01111 | Bma-Chr15:44081255 | 1.14E-35 | dispersed | |
Bma15g01111 | Bma-Chr15:44081255 | Bma04g00830 | Bma-Chr4:10384455 | 3.62E-33 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma15g01111 | K10598 | - | rcu:8283368 | 978.008 |