Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g01111 ATGGGGAAGAAGCAGCACAGTAAAGATCGGATGTACATCACCAAAACTGAGTGGGCTACTGAATGGGGTGGCGCCAAAGCCAAAGATACGCAAGCCCCCTTTAAACGCCTTCCCTTCTACTGCTGCGCGCTGACATTCACGCCGTTCGAAGACCCAGCGTGTACTGCCGATGGCAGTGTCTTTGATGTCATGCACATAATCCCTTATATCCGTAAGTATGGCAAACATCCGGTTACCGGAGTGCCACTGAAGCAGGTGGATCTCATCCCCCTAACTTTCCACAAGAATTCCGAAGGAGAGTATCATTGTCCTGTACTAAACAAGGTTTTTACGGAATTTACGCACATAGTTGCCGTGAAGACCACAGGAAATGTCTTTTGCTATGAGGCAATCAAAGAATTAAATATTAAGACAAAGAACTGGAAGGAGCTCCTTACTGATGAATCATTCACTATGAAAGACCTTATCACAATTCAGAATCCTAATGCCCTTGAAAGCAAGGCCCTTCTGGGATTTGATCATGTAAAAAATAATCTGAAAGTTGACGATGAAGAACTGAAGAAAATGAGTATAGATCCTGCCTATAATATTAACGTTTCTGGAGATATCAAGCAGATGCTTGAGGAGCTTGGAACTGCTAAAGGAAAGGAAACTGCCCTTCACGGAGGAGGTGGTAACAAGGCACAGAAAGAAAGGGCTGCTGCACTTGCTTCCATTTTAGCTGCAAGATCAAATATTAAAGAGGATTTAAATTCAAATGGAGAGGTCAATGCCCGCCAATCATACAGTATTGTAGATGCTGCATCTGCTTCAGTTCAAGGTAGAAGTGCTGCTGCTGCTAAAGCAGCATCAAGTGATAAAACTGCTGCTAGGATAGCTATGCACATGGCAGGTGAAAGAGCTCCTGTTAATGCAAAGATGGTAAAAAGTCGCTATACAACTGGTGCTGCTTCACGGTCCTTTACTTCAACATCTTATGATCCTGTTACTAAGAACGACTTTGAATACATAAAAGTTGAGAAGAATCCAGAGAAGAAAGGATATGTACAGTTGCATACCACACATGGAGATTTGAATATCCAGTTGCACTGTGATATTTCACCTAGAGCTTGTGAGAACTTCATCACTCTTTGTGAGCGCGGTTATTATGATGGCGTAGCTTTTCATAGAAGCATCCGGAATTTCATGATTCAAGGTGGTGATCCAACTGGAAGTGGGAAAGGAGGAGAATCTATTTGGGGAAAACCATTTAAAGATGAATTCAACTCTAAGTTGGTTCACTCTGGACGAGGTGTAGTCAGCATGGCGAACAGTGGTCCCCACACGAATGGTTCTCAGTTCTTTATCCTTTACAAATCTGCAAATCACTTAAACTTCAAGCATACAGTATTTGGTGGAGTTGTAGGTAACTTGACTACTCTGGCAGCCATGGAAAAGGTTCCAGTCGATGATGATGACCGACCTATGGAGGAAATTAAAATAACAAGTGTCACAATTTTTGTCAATCCTTACACAGAACCCGACGAAGAAGAGGAAGAAAAGGCAAAAGAAGAGAAGAATGCTCTGGATGAAGATAATGATAAAGTTGGATCATGGTATAGTAATCCCGGCACGGGAGCAGCGGATACCCAAGCGGTAAGCAGTGGCGGTGGTGGTGTTGGGAAATACTTGAAAGCTAGAAATGGCAAAGCTGAATCTTCCAAAGTTGAGGCAAGTAGTAAAGTAGAAGCAAATACTACAACAAAAAAGAGAAAAGTTGGAGTCTCCACGGCAGAATTCAAAGACTTCTCTTCATGGTAA 1800 42.61 MGKKQHSKDRMYITKTEWATEWGGAKAKDTQAPFKRLPFYCCALTFTPFEDPACTADGSVFDVMHIIPYIRKYGKHPVTGVPLKQVDLIPLTFHKNSEGEYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWKELLTDESFTMKDLITIQNPNALESKALLGFDHVKNNLKVDDEELKKMSIDPAYNINVSGDIKQMLEELGTAKGKETALHGGGGNKAQKERAAALASILAARSNIKEDLNSNGEVNARQSYSIVDAASASVQGRSAAAAKAASSDKTAARIAMHMAGERAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNDFEYIKVEKNPEKKGYVQLHTTHGDLNIQLHCDISPRACENFITLCERGYYDGVAFHRSIRNFMIQGGDPTGSGKGGESIWGKPFKDEFNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGNLTTLAAMEKVPVDDDDRPMEEIKITSVTIFVNPYTEPDEEEEEKAKEEKNALDEDNDKVGSWYSNPGTGAADTQAVSSGGGGVGKYLKARNGKAESSKVEASSKVEANTTTKKRKVGVSTAEFKDFSSW 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 44081255 44093981 + Bma014435.1 Bma15g01111 97233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g01111 599 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 383 400 IPR020892 GO:0003755|GO:0006457
Bma15g01111 599 MobiDBLite consensus disorder prediction 531 545 - -
Bma15g01111 599 SUPERFAMILY Cyclophilin-like 348 509 IPR029000 -
Bma15g01111 599 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Bma15g01111 599 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 597 IPR044666 -
Bma15g01111 599 Gene3D - 328 513 IPR029000 -
Bma15g01111 599 SUPERFAMILY RING/U-box 37 104 - -
Bma15g01111 599 Coils Coil 508 528 - -
Bma15g01111 599 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
Bma15g01111 599 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 348 498 IPR002130 GO:0000413|GO:0003755
Bma15g01111 599 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 352 499 IPR002130 GO:0000413|GO:0003755
Bma15g01111 599 PANTHER RING-TYPE E3 UBIQUITIN-PROTEIN LIGASE PPIL2 2 597 - -
Bma15g01111 599 MobiDBLite consensus disorder prediction 504 588 - -
Bma15g01111 599 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842|GO:0016567
Bma15g01111 599 MobiDBLite consensus disorder prediction 571 586 - -
Bma15g01111 599 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 362 377 IPR002130 GO:0000413|GO:0003755
Bma15g01111 599 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 446 458 IPR002130 GO:0000413|GO:0003755
Bma15g01111 599 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 431 446 IPR002130 GO:0000413|GO:0003755
Bma15g01111 599 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 459 474 IPR002130 GO:0000413|GO:0003755
Bma15g01111 599 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 388 400 IPR002130 GO:0000413|GO:0003755
Bma15g01111 599 CDD cyclophilin_RING 348 506 - -
Bma15g01111 599 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02208 Bma-Chr1:78992186 Bma15g01111 Bma-Chr15:44081255 8.95E-47 dispersed
Bma04g01568 Bma-Chr4:51666081 Bma15g01111 Bma-Chr15:44081255 1.05E-48 dispersed
Bma06g01227 Bma-Chr6:49371933 Bma15g01111 Bma-Chr15:44081255 3.47E-38 dispersed
Bma08g00813 Bma-Chr8:45746917 Bma15g01111 Bma-Chr15:44081255 5.41E-33 dispersed
Bma14g00417 Bma-Chr14:4932265 Bma15g01111 Bma-Chr15:44081255 1.14E-35 dispersed
Bma15g01111 Bma-Chr15:44081255 Bma04g00830 Bma-Chr4:10384455 3.62E-33 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g01111 K10598 - rcu:8283368 978.008