Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma15g01117 ATGAGTTGCAATGGCTGCCGTGTTCTTCGAAAGGGTTGCAGTGAGACCTGTATTCTTCGCCCTTGTTTGCAGTGGATTCCGACTCCCGACGCTCAGGGCCACGCCACTGTCTTCGTTGCCAAGTTCTTCGGTCGCGCTGGTCTCATCTCTTTCATCTCCGCCGTCCCCGAGTCTCAGCGACCTTCGCTGTTTCAGTCTTTGTTGTTCGAGGCGTGTGGACGGACGGTTAATCCTGTGAGCGGAGCTGTGGGGCTCCTCTGGACTGGAAACTGGAACGTCTGCCAGACGGCTGTCGAGACTGTCCTAGGAGGCGGAACGTTGCGCACCATCCCTGATCTGGTCTACGGTGGGTCTCCTGCTCCGCCTTCGGACGAGGATTCCGAGGCCGAAGTGGCCTGTACAGACATGTGGAAGCTACAAGACTGGAAACCGAATTCCAGGTTTTCCAATTCACGCTCCAGGCCCTTGATCAAACGCAAACGTACGGATGAAGTGGCGAAGCTTCCACTGACGGATCTAGATCTTCGCCTCACGTCAGGTATACCGGCGAAAATGTCATGTGAACTCCAGCGGCCGGAGACTCCGTCTAGGAATTCGGAGGAGTCCGTAACCACTTCGTGCATCGACTTGGATTTATGCGACCGGAAGGGTGATGTGGGAAATGAAAAGCTTCTGAATTTGTTCATCTGA 690 54.93 MSCNGCRVLRKGCSETCILRPCLQWIPTPDAQGHATVFVAKFFGRAGLISFISAVPESQRPSLFQSLLFEACGRTVNPVSGAVGLLWTGNWNVCQTAVETVLGGGTLRTIPDLVYGGSPAPPSDEDSEAEVACTDMWKLQDWKPNSRFSNSRSRPLIKRKRTDEVAKLPLTDLDLRLTSGIPAKMSCELQRPETPSRNSEESVTTSCIDLDLCDRKGDVGNEKLLNLFI 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 44210380 44211155 + Bma014441.1 Bma15g01117 97239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma15g01117 229 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Bma15g01117 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 229 - -
Bma15g01117 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 229 - -
Bma15g01117 229 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g00353 Bma15g01117 CCT
Bma06g00353 Bma15g01117 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00677 Bma-Chr1:6170564 Bma15g01117 Bma-Chr15:44210380 2.06E-54 dispersed
Bma01g01122 Bma-Chr1:11853301 Bma15g01117 Bma-Chr15:44210380 1.29E-51 dispersed
Bma01g02251 Bma-Chr1:79682963 Bma15g01117 Bma-Chr15:44210380 5.92E-52 dispersed
Bma02g00477 Bma-Chr2:7683650 Bma15g01117 Bma-Chr15:44210380 6.07E-51 dispersed
Bma15g01117 Bma-Chr15:44210380 Bma03g00230 Bma-Chr3:1749341 2.50E-11 dispersed
Bma15g01117 Bma-Chr15:44210380 Bma06g00353 Bma-Chr6:8119625 1.29E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58534 PF03195 LOB 1.90E-25 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma15g01117 - - zju:107424931 327.405