Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00023 CTGGACCAGGGATGGCTAACTCTTCCTGATTCTGAATCCATCTCCCTCCCTCTCCCCAAACCACTCTCTGCTGCTTCCTTTCACTGCCCCCTGGCCGACTCCTCTACAATGTTTGGCGACTTCCACTTTCCTATTAAACTCCGTCTCCCACGCGAACACCCTCACCCGCCTTCGGATGATAATCGGATGGTTGTCGATGAGCTCGACTTCTTCTCCGTTAAGACAAGCGTTTCTGAACACCACGAACCACGTGGTAATTCTTGCAAACCCACCGGAGTTACCGTGAAAAGAGAACAGTGCAACTTTGAGCCGCCGCCGCCCGACTTGGCTGTAAATACTGGATTGCACCTGCTAATCACCAACACTGGAAGCAATCAGTCAGCGGTGGACGATGGGATCTCATCGGAAGGCAGTCGTGTCCACAAGCAAGATAAGAGTGAGCTGCTTCAATTGCAAGGGGAACTTGGTCGAATGAATGCGGAGAATTATAAATTGAGAGAAATGCTCACCCAGCTCAACAACGACTACAATGCTCTGCAGATGCATCTTTTGGCCGTAAAACAACAGCAACAACCCAATCACCCATCTGAAATTACTCAACTACAGATTGTTGAAGGAGAATCTGGCCTGAAAAATCAAGTTCTGGTGGGAAGAGGGATGGTGCAAAAGCAGTTCATGGATCTTGGACCCAGTGCGGTGGATGATCAAATATCCCAGTCTTCATCTGATGAAAGAACGGTTTCTGGGTCGTCTTTGAATCAAGCAGACGGTGGCGGGTTAAAGAGAACCATAAATGATATTAATTCATTAGATAAGGAACAATCTAATGTGAGGGCAGAGAAAAGAAGGGAAGACAGCCCTGACTTAGATGGTCATGGTCCTAGTAAATCGAACTCTGTCAAACCTCTGGACCACCCGACGACGACGGAGGGCACCATGAGGAAAGCCCGCGTCTCTGTTCGAGCTCGATCAGAAGCGCCAATGATAAACGACGGATGCCAATGGAGGAAGTATGGGCAAAAGATGGCCAAAGGAAACCCATGCCCTCGGGCTTATTATAGATGCACCATGGCAGTTGGATGTCCAGTTCGAAAACAAGTTCAACGATGCGCTGAAGATCGAACAATTTTGATAACTACGTATGAAGGGAAACATAATCACCCTCTCCCGCCAGCTGCTGTCGCTTTGGCTTCCACCACAACTGCTGCTGCTACCATGCTATTATCTGGGTCGATGCCAAGCGCAGATGGCTTAATGAACCAGAATTTGCTGGCAAGGGCCATTCTTCCTTGCTCATCAAACATGGCAACAATTTCAGCTTCTGCTCCATTTCCGACAGTCACCTTGGACCTCACTCACACACCAAACAACCCATTGCATGAATTCGAAAGACCTCCCACCACCCAGATCCATCTCCCATTTCCGGGTCATCCCCATCAGCTTCCTCCCCAGTTTTTTTGTCAAACGCTGTATAATCAATCAAAGCTCTCGGGTCTTCAACTCTCCGGCCATGGAAGCTGTTCTTCTCATTTATTCCAGCAAGCTCTACCGCCTTTATTGCACCAGGACCCCCCACCTTCTTCGTTTCTCGACTCATTGAGTGCTGCCACTGCTGCCATCGCCTCTGATCCTAACTTCACGGCTGCTCTTGCTGCGGCCATAAGCTCCATCATCGGCAGCGGTCCGGCGAACACTGAAAACGCCAACGTCTCTGCAAGCAACAACAACAACATCAACGAAGTGAATAGTTAG 1752 49.26 LDQGWLTLPDSESISLPLPKPLSAASFHCPLADSSTMFGDFHFPIKLRLPREHPHPPSDDNRMVVDELDFFSVKTSVSEHHEPRGNSCKPTGVTVKREQCNFEPPPPDLAVNTGLHLLITNTGSNQSAVDDGISSEGSRVHKQDKSELLQLQGELGRMNAENYKLREMLTQLNNDYNALQMHLLAVKQQQQPNHPSEITQLQIVEGESGLKNQVLVGRGMVQKQFMDLGPSAVDDQISQSSSDERTVSGSSLNQADGGGLKRTINDINSLDKEQSNVRAEKRREDSPDLDGHGPSKSNSVKPLDHPTTTEGTMRKARVSVRARSEAPMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGKHNHPLPPAAVALASTTTAAATMLLSGSMPSADGLMNQNLLARAILPCSSNMATISASAPFPTVTLDLTHTPNNPLHEFERPPTTQIHLPFPGHPHQLPPQFFCQTLYNQSKLSGLQLSGHGSCSSHLFQQALPPLLHQDPPPSSFLDSLSAATAAIASDPNFTAALAAAISSIIGSGPANTENANVSASNNNNINEVNS 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 211497 213675 + Bpe000024.3 Bpe01g00023 97271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00023 583 ProSiteProfiles WRKY domain profile. 324 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe01g00023 583 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 39 569 IPR044810 GO:0003700
Bpe01g00023 583 SUPERFAMILY WRKY DNA-binding domain 322 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe01g00023 583 PANTHER WRKY TRANSCRIPTION FACTOR 6 39 569 - -
Bpe01g00023 583 SMART WRKY_cls 329 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe01g00023 583 Gene3D WRKY domain 314 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe01g00023 583 MobiDBLite consensus disorder prediction 233 258 - -
Bpe01g00023 583 Pfam WRKY DNA -binding domain 330 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe01g00023 583 Coils Coil 169 189 - -
Bpe01g00023 583 MobiDBLite consensus disorder prediction 232 324 - -
Bpe01g00023 583 MobiDBLite consensus disorder prediction 273 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00023 Bpe-Chr1:211497 Bpe15g00723 Bpe-Chr15:17745681 3.16E-152 dispersed
Bpe01g00023 Bpe-Chr1:211497 Bpe08g00012 Bpe-Chr8:79830 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20745 PF03106 WRKY 5.50E-24 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00023 - - mcha:111012275 511.531