Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00093 ATGGAGGTCTCATGGGAGGAAAGCGTCACAGATTCAATAAACACGGTATACCTTCTCTTCTCTGCGTATCTCGTGTTTGTAATGCAGCTTGGGTTCGCGATGCTCTGTGCTGGCTCTGTTCGAGCCAAGAACGCCATGAACATAATGCTCACCAACGTGGTTGACGCCGTTGTTGGTAGCATCTCCTACTATCTGTTCGGTTTTGCTTTTGCGTTTGGCGATGGTTCTAGCTCCAATCCTTTCATTGGGTCAACCTATTTTGCTCTCGCAGACATCCCCAGTAGCTCCTATGATTACAGCTTCTTTCTTTATCAATGGGCCTTCGCCATAGCTGTCGCCGGTATAACCAGCGGCTCCATAGCTGAGCGAACTCAGTTCCCTTCCTACCTTATTTTCTCCTTTTTCCTCACTGGGTTTGTGTATCCTATCGTGGTTCACTGGATTTGGTCCTCCAGCGGCTGGCTCAGTCCGAATTCCAGCAATTTGCTGTTTGATTCCGGAGCAATTGACTTCGCCGGGAGTGGCGTGGTGCATTTAGTGGGTGGGATTGCCGGTCTTTGGGGCGCTTTGATTGAAGGGCCACGGGTCGGGAGGTTTGATGCATTTGGAAAGCCGGTGCCGATGAGAGGGCACAATGCGACGCTGGTGGTTCTTGGTACATTCTTGCTGTGGTTTGGGTGGTTTGGATTCAATCCAGGTTCGTTTGATAAGATTCTGGTGTCCTACCCAGGCACAACGAACGAGGGTAATTGGACTGGAGTTGGTCGGACTGCAGTTAACACTACATTAGCTGGGTCCGCCGCCGGATTGACAACTCTTTTCGGCCGACGATTACTCATCGGCCACTGGGACGCCTTGGACGTCTGCAATGGGTTGCTTGGTGGGTTTGTCGCCATCACGTCAGGCTGTTCTGTAGTCGAACCATGGGCAGCGATCGTGTGTGGGTTTGTAGCCGCTTGGGTACTGATTGGGCTAAACATTTTGGCACTCAAACTGCGTTTTGACGACCCACTGGAGGCCACCCAATTGCACGGCGGCTGCGGTATGTGGGGGGTGATATTCACTGGCTTATTTGCCAAAGAGGAATTTGTCATTGATGCCTACAATGCCGGAGACACCAGCGTGGTCCGACCATATGGGCTCTTACTCGGCGGAGGGTGGAAGCTATTTGGAGCTCAAGTGATCGAAGTTTTAGTGATTGTGGGTTGGGTTAGCTTGACGATGGGTCCCCTATTTTTTGGCCTTCACAAGCTTAGAATTTTGAGGATCACAGCTGAAGAAGAAGTTGCAGGTCTCGACATATCCAGTCATGGTGGATATGCATACAGTCATTCGGAGGATAATCAACCTCGATTTTACGCTGATTACCTCCGCTTGCAACCTCGGCAATCTTGA 1395 50.82 MEVSWEESVTDSINTVYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYLFGFAFAFGDGSSSNPFIGSTYFALADIPSSSYDYSFFLYQWAFAIAVAGITSGSIAERTQFPSYLIFSFFLTGFVYPIVVHWIWSSSGWLSPNSSNLLFDSGAIDFAGSGVVHLVGGIAGLWGALIEGPRVGRFDAFGKPVPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVSYPGTTNEGNWTGVGRTAVNTTLAGSAAGLTTLFGRRLLIGHWDALDVCNGLLGGFVAITSGCSVVEPWAAIVCGFVAAWVLIGLNILALKLRFDDPLEATQLHGGCGMWGVIFTGLFAKEEFVIDAYNAGDTSVVRPYGLLLGGGWKLFGAQVIEVLVIVGWVSLTMGPLFFGLHKLRILRITAEEEVAGLDISSHGGYAYSHSEDNQPRFYADYLRLQPRQS 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 578981 580375 - Bpe000092.1 Bpe01g00093 97341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00093 464 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bpe01g00093 464 TIGRFAM amt: ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe01g00093 464 Pfam Ammonium Transporter Family 17 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bpe01g00093 464 PANTHER AMMONIUM TRANSPORTER 1 461 - -
Bpe01g00093 464 SUPERFAMILY Ammonium transporter 10 423 - -
Bpe01g00093 464 Gene3D Ammonium transporter AmtB like domains 3 458 IPR029020 -
Bpe01g00093 464 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 461 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00093 Bpe08g00077 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00093 Bpe-Chr1:578981 Bpe11g01296 Bpe-Chr11:9691859 0 dispersed
Bpe01g00093 Bpe-Chr1:578981 Bpe03g00991 Bpe-Chr3:29438718 3.51E-19 wgd
Bpe01g00093 Bpe-Chr1:578981 Bpe08g00077 Bpe-Chr8:420065 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00093 K03320 - csin:114302781 801.971