Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00096 ATGCCTTCCATTGCTGGAGTCCACCTCTCTATGATTGAGAATGAAGCTACATTTGATGAGATTGGAGATTTCAAATCGGTGGAAGCCGCGGAGGTGCCTAGATCCACTGGCGACGTCACACCTCAGAAGCGGAAATTGAGATCGAATTCTGAGCGGGCTAGGAAGAGCCCCGTATCTCTGTCAATGAAATGGAAGCCCCCCCGTCCATCCACAGATACTACACCTGATCGTCCATCAAACCATGCGGATGATAGCCTTCCTAATGTGCGCAAATCACCTGTAAAATGCCTGGCTAAGAGTTTCAGTACTAAACCAAATTGGAATCCCAGAGACCGGGAGCAAATAAAGGTAGTGAAGGAAGCATTGCATGTGTCTACAGCGCCATCTAGTGTTGTATGCCGTGAAGATGAGCAAACGAGAATATTGAACTTCTGTAAGGATTCTGTAGAGAAAGGGAAACCGGGAAGTTTATATGTTTGTGGGTGTCCAGGGACTGGAAAATCATTGTCCATGGAAAAAGTGAAGCATCGTCTTGTTGATTGGGCAACAGAGGCCGGTCTTCAGCTGCCGGATATCTTGGCTGTAAACTGCACTTCTCTATCAAATACATCTGACATATTTACCAAGATACTCGGTGAAAAGAAACAAAACAAGAAAAAGACTGGTTCAATCTCACCACTGCAATATCTTCAGAGCTTTTACTCGCAACAACCAAAATCATCTTCCATGAAAATGACACTGCTGATTGCAGATGAGTTGGATTACTTAATTACCAAGGATAAAGCAGTACTTAATGATCTTTTCATGCTTACAACTCTGCCCTTCTCCAGGTGTATTCTGATAGGTATTGCTAATGCCATTGACCTAGCAGATCGTTTTCTTCCTCACCTTCACTCATTAAATTGTAAGCCTCTGGTTATAACATTTAAGGCCTACTCTAAAGATCAGATTATCAAGATTCTTCAAGAAAGGCTTATTTCGCTTCCTTTTTCTGTCTTTCAGCCACAAGCTCTGGAACTTTGTGCAAGAAAAATTTCTGCCATGTCGGGTGATATGAGACAAGCACTTTGTGTCTGCAGAAGTGCCACTGAACTGATAGAAGCTGAGGTATGTCAAACCGTAAATCTATCTGCAGATCAAGCTTCGAGCAAGGAACATGAAACTTCAGTACCGCGAGAATCTGATATTGTGAGAGTCGATCATATGGCTGCTGTACTGTCAAAGTCTTATAAATCATCAGCAGTGGACACTATAAAATCTCTTCCTCAACATCAGCAGATTATCCTTTGCTCCCTTGTGAAGCTTTTTCGAGGAGGAAGGAAGGATTCAACGGTTTGGGAGCTGAATAAATCCTACATAGATTCTTGCAAATCGACACTGATACCACCAGTTGGAACCTTAGAACTGTCAAACATGTATAGAGGTCTTAATGATCAGGGTCTTCTCAAACTAGGCCAATCTCGAGACGAAAGATTAAAAAGAGTGACATTAACAGTTGAAGAAGCAGATATCACCTTTGCGTTACAGGTGTGTTATGCATTTTTTTTTTGTTACTCAGAATGA 1563 42.16 MPSIAGVHLSMIENEATFDEIGDFKSVEAAEVPRSTGDVTPQKRKLRSNSERARKSPVSLSMKWKPPRPSTDTTPDRPSNHADDSLPNVRKSPVKCLAKSFSTKPNWNPRDREQIKVVKEALHVSTAPSSVVCREDEQTRILNFCKDSVEKGKPGSLYVCGCPGTGKSLSMEKVKHRLVDWATEAGLQLPDILAVNCTSLSNTSDIFTKILGEKKQNKKKTGSISPLQYLQSFYSQQPKSSSMKMTLLIADELDYLITKDKAVLNDLFMLTTLPFSRCILIGIANAIDLADRFLPHLHSLNCKPLVITFKAYSKDQIIKILQERLISLPFSVFQPQALELCARKISAMSGDMRQALCVCRSATELIEAEVCQTVNLSADQASSKEHETSVPRESDIVRVDHMAAVLSKSYKSSAVDTIKSLPQHQQIILCSLVKLFRGGRKDSTVWELNKSYIDSCKSTLIPPVGTLELSNMYRGLNDQGLLKLGQSRDERLKRVTLTVEEADITFALQVCYAFFFCYSE 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 592992 598676 - Bpe000095.1 Bpe01g00096 97344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00096 520 Pfam AAA domain 153 271 IPR003593 -
Bpe01g00096 520 CDD AAA 137 298 - -
Bpe01g00096 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 375 IPR027417 -
Bpe01g00096 520 Gene3D - 111 302 IPR027417 -
Bpe01g00096 520 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 30 509 - -
Bpe01g00096 520 SMART Cdc6_C_2 429 508 IPR015163 -
Bpe01g00096 520 MobiDBLite consensus disorder prediction 26 89 - -
Bpe01g00096 520 Pfam CDC6, C terminal winged helix domain 429 507 IPR015163 -
Bpe01g00096 520 PIRSF Cdc6 10 514 IPR016314 GO:0006270|GO:0051301
Bpe01g00096 520 Gene3D - 419 507 IPR036388 -
Bpe01g00096 520 Gene3D - 303 418 - -
Bpe01g00096 520 SUPERFAMILY Winged helix DNA-binding domain 415 509 IPR036390 -
Bpe01g00096 520 Pfam AAA lid domain 334 376 IPR041083 -
Bpe01g00096 520 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 30 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00096 Bpe-Chr1:592992 Bpe11g00926 Bpe-Chr11:6841468 9.55E-32 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00096 K02213 - mnt:21404873 627.861