Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00119 ATGGGCGACATCTGCTGCGGTGTTTTTACTGACGGCGACAACTCCTCTCCCCGCGACTCCAGCTTTCGTTTGGCTAGGCGGCGGAGGATGGTGATCAGGAGGGTTAAGCTTGGGGTTGATGTACTGCCATCGGAGGCGGAGAGAGAGAGTCAACGTCCGAAGCTTGAGATTTGCGCCCGATCGTCGTCTAGGGACTGCCATCGCCCAGCGGAGAGCTGTGTTTTCGAAGATGGAGAGCGGAACAAATTGGTAGGCACTAGACGAATGGGAACTAAGGAGATCTCATGTTCTGGGGAGCCATCCGCCGTTCAGGTGCCGATGACGTGTCAATCTTGCTCTGAACTTCTTGGCCCAAAAAATCCCGATGACTCTCCAAAGTTCGGGACTGCTTCGGTGTGTGGAAGGCGGAGAGAAATGGAGGACGCTGTGGCTATTCATCCTTCCTTTTTCCAACGAAACCTCGAAAAGATATCTTCTTCGTTTCACTATTTTGGTGTATATGACGGCTATGGATGCTCACACGTTTCTACCAGGTGCCGAGAACGACTCCATGAGCTGGTGAAAGAAGAGCTGGAGAAAACGGAACCACCGGTAAAGGAGTGGAAAAATATCATGGAGAGGAGCTTCCGGAGAATGGATAAGGAGGTCGTGGTGTCAAATAATAGTTGTGCAGCTACGAAATGCAGCTGCGCGCTTCAGTCGCCGCAGTGCGATGCGGTCGGATCTACGGCTGTTGTTTCGATTCTTACTTCTGATAAGATCATTGTGGCGAACTGCGGCGACTCGAGAGCAGTGCTTTGTCGTAACGGACTACCCATACCTCTATCTTCCGATCACAAACCGAATCGTCCGGACGAACTGAGTCGAATCCGTGCCGCGGGTGGACGAGTAATCTATTGGGACGGTCCTCGAGTTCTCGGAGTTCTAGCCACGTCCAGGGCTATAGGTGAACTGGTGGATCATCATTCTAAAGCTCCCGATTTTTATGCTAGTGCAGGCGCTAACCACCTCAAGCCATACGTGATCTGCGAGCCAGAAGTAACGTCGACCGAACGGAAGGAGGACGACGAGTGTCTTATTCTAGGCAGCGACGGGCTGTGGGACGTGGTGTCGAACGAGACGGCGTGCAGGATGGTGCTCATGTGCTTGCGAGGGAAGAAGGACGAGAAGGCGGCGAGGGGGAGTGAAAAGAGCGACTGCGGGGGAGAGACGGCGGACGAGGCTTGTACGGAAGCATCCATGGTGCTTACGAAACTGGCTTTGGCGAGGGGAAGCTCGGACAATGTCAGCGTGGTGGTAGCGGATCTGAGGAGGGACACGTGGGATAAGAAGTACGTTTCTTGTCGCTGA 1350 53.78 MGDICCGVFTDGDNSSPRDSSFRLARRRRMVIRRVKLGVDVLPSEAERESQRPKLEICARSSSRDCHRPAESCVFEDGERNKLVGTRRMGTKEISCSGEPSAVQVPMTCQSCSELLGPKNPDDSPKFGTASVCGRRREMEDAVAIHPSFFQRNLEKISSSFHYFGVYDGYGCSHVSTRCRERLHELVKEELEKTEPPVKEWKNIMERSFRRMDKEVVVSNNSCAATKCSCALQSPQCDAVGSTAVVSILTSDKIIVANCGDSRAVLCRNGLPIPLSSDHKPNRPDELSRIRAAGGRVIYWDGPRVLGVLATSRAIGELVDHHSKAPDFYASAGANHLKPYVICEPEVTSTERKEDDECLILGSDGLWDVVSNETACRMVLMCLRGKKDEKAARGSEKSDCGGETADEACTEASMVLTKLALARGSSDNVSVVVADLRRDTWDKKYVSCR 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 688960 690672 - Bpe000117.1 Bpe01g00119 97367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00119 449 Gene3D - 119 444 IPR036457 -
Bpe01g00119 449 Pfam Protein phosphatase 2C 128 429 IPR001932 -
Bpe01g00119 449 PANTHER ALPHABET, ISOFORM E-RELATED 333 440 - -
Bpe01g00119 449 PANTHER ALPHABET, ISOFORM E-RELATED 118 317 - -
Bpe01g00119 449 SMART PP2C_4 114 434 IPR001932 -
Bpe01g00119 449 PANTHER PROTEIN PHOSPHATASE 2C 37 333 440 - -
Bpe01g00119 449 PANTHER PROTEIN PHOSPHATASE 2C 37 118 317 - -
Bpe01g00119 449 ProSiteProfiles PPM-type phosphatase domain profile. 126 436 IPR001932 -
Bpe01g00119 449 SUPERFAMILY PP2C-like 126 437 IPR036457 -
Bpe01g00119 449 CDD PP2Cc 126 436 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00119 Bpe11g00748 CCT
Bpe01g00119 Bpe08g00091 CCT
Bpe01g00119 Bpe11g00748 ECH
Bpe01g00119 Bpe08g00091 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00119 Bpe-Chr1:688960 Bpe14g00271 Bpe-Chr14:2768293 1.20E-69 dispersed
Bpe03g00318 Bpe-Chr3:4653698 Bpe01g00119 Bpe-Chr1:688960 9.22E-60 transposed
Bpe01g00119 Bpe-Chr1:688960 Bpe11g00748 Bpe-Chr11:5673131 1.81E-122 wgd
Bpe01g00119 Bpe-Chr1:688960 Bpe15g01272 Bpe-Chr15:21139929 5.92E-125 wgd
Bpe01g00119 Bpe-Chr1:688960 Bpe04g01718 Bpe-Chr4:23010274 1.54E-123 wgd
Bpe01g00119 Bpe-Chr1:688960 Bpe08g00091 Bpe-Chr8:499563 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00119 K14497 - tcc:18590620 469.929