Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00128 ATGGCGGTCTTTGTAGCATCCCTAGCCTGCCTTGTATCATTAATGTGGGTAGCTGAAGGAAGAATTCCTGGCGTTTACAATGGTGGCGCATGGGAGAGCGCTCATGCTACATTCTATGGAGGTTCTGATGCTTCTGGTACAATGGGAGGAGCTTGTGGGTACGGAAATCTGTACAGCCAGGGCTACGGAGTGAACACGGCGGCGCTTAGCACAGCGCTGTTCAACAGTGGCCTGAGCTGCGGCGCATGCTTCGAGATAAAGTGCGCAAACGATCGACAGTGGTGTCATTCCGGAAGCCCATCCATCTTCATTACCGCTACTAACTTTTGTCCACCCAACTTCGCTCTTCCAAATGACAATGGCGGCTGGTGCAACCCCCCTCGCCCTCACTTCGACCTCGCCATGCCTATGTTCCTCAAGATCGCCGAATACCGCGCCGGAATCGTCCCCGTCGCTTACCGCCGAGTCCCATGCCGAAAACAGGGAGGGATGAGATTTACGATAGTCGGATTCCGGTACTTCAACTTGATTCTGATCTCGAACGTCGCGGGTGCAGGGGATTTAGTGAGGGTGAGCGTGAAAGGGACGAAGACTGGTTGGATGAGCATGAGCAGAAACTGGGGTCAAAACTGGCAGTCAAACGCAGATCTGGTAGGGCAGTCATTGTCATTCAGGGTGACAAGCAGCGACAGAAGAACCTCCACCTCCTGGAACATCGTCCCATCCCATTGGCAGTTCGGTCAAACTTTCACCGGCAAGAACTTCAGAGTCTGA 774 53.62 MAVFVASLACLVSLMWVAEGRIPGVYNGGAWESAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSIFITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGMRFTIVGFRYFNLILISNVAGAGDLVRVSVKGTKTGWMSMSRNWGQNWQSNADLVGQSLSFRVTSSDRRTSTSWNIVPSHWQFGQTFTGKNFRV 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 758960 759967 + Bpe000126.1 Bpe01g00128 97376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00128 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Bpe01g00128 257 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Bpe01g00128 257 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Bpe01g00128 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Bpe01g00128 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Bpe01g00128 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Bpe01g00128 257 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Bpe01g00128 257 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Bpe01g00128 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Bpe01g00128 257 PANTHER EXPANSIN 5 256 - -
Bpe01g00128 257 Pfam Lytic transglycolase 66 153 IPR009009 -
Bpe01g00128 257 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Bpe01g00128 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 163 IPR007112 -
Bpe01g00128 257 SUPERFAMILY Barwin-like endoglucanases 10 181 IPR036908 -
Bpe01g00128 257 SMART dpbb_1 66 153 IPR007112 -
Bpe01g00128 257 Gene3D - 167 255 IPR036749 -
Bpe01g00128 257 PANTHER EXPANSIN-A15 5 256 IPR002963 GO:0009664
Bpe01g00128 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Bpe01g00128 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Bpe01g00128 257 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Bpe01g00128 257 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Bpe01g00128 257 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Bpe01g00128 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Bpe01g00128 257 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Bpe01g00128 257 SUPERFAMILY PHL pollen allergen 160 252 IPR036749 -
Bpe01g00128 257 Gene3D - 17 159 IPR036908 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00128 Bpe08g00100 CCT
Bpe01g00128 Bpe08g00100 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00128 Bpe-Chr1:758960 Bpe10g00880 Bpe-Chr10:14579466 1.70E-124 dispersed
Bpe04g00680 Bpe-Chr4:4313941 Bpe01g00128 Bpe-Chr1:758960 9.66E-112 dispersed
Bpe01g00128 Bpe-Chr1:758960 Bpe03g01037 Bpe-Chr3:29712682 1.06E-165 wgd
Bpe01g00128 Bpe-Chr1:758960 Bpe04g01834 Bpe-Chr4:23631699 8.13E-163 wgd
Bpe01g00128 Bpe-Chr1:758960 Bpe04g01713 Bpe-Chr4:22972599 3.80E-153 wgd
Bpe01g00128 Bpe-Chr1:758960 Bpe04g00743 Bpe-Chr4:4754375 3.51E-159 wgd
Bpe01g00128 Bpe-Chr1:758960 Bpe08g00100 Bpe-Chr8:548069 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00128 - - qsu:112016081 485.337