Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe01g00159 ATGGATGTCAAGGGACTGAATATGGAGGATGAAATTTCCAAGGATGGAAAAGTTAAAGGAAACCGAGCTCAGACATTTTCATTCTTAGAGCTCACCGCTGCAACTGGAAATTTTCGGTCCAATTGTTTTCTTGGAGAAGGAGGATTTGGCAAAGTCTACAAGGGGTACATTGAGGGAGTAAACCAGGTTGTAGCTATCAAACAATTAGACCGAAATGGTCATCAAGGAATTCGAGAATTTGTTGTTGAAATCCTAACATTAAGTATGGCTGACCACCCAAATCTCGTAAAATTATTGGGTTTTTGTGCTGAGGAGGATCAAAGGCTACTGGTTTATGAATACATGCCACTGGGATCGTTAGAGAATCATTTGCACGATATTCCACCTGGTGGAAAAGTACTCGATTGGCAGACAAGAATGAAAATAGCTGCTGGAGCAGCTAGAGGTCTTGAGTATTTGCATGAAAAAATGAAGCCCCCGGTTATATACCGTGATCTAAAATGTTCGAACATTTTGCTTGGCGAGGAATATTATCCTAAGCTATCTGATTTTGGATTGGCTAAAGTTGGCCCTAGTGGAGATAATACTCATGTTTCTACTAGAGTAATGGGAACTTATGGGTATTGTGCTCCTGATTATGCAATGACAGGTCAACTTACATTCAAATCAGATATTTACAGCTTTGGAGTCGTTCTTTTGGAACTCATAACTGGCAGGAAAGCAATTGATCAAACAAAGCCTCCAAAAGAACAAAACTTGGTAGCATGGGCACGGCCATTGTTTAGAGACAGAAAGAAGTTCTCACTAATGGTAGATCCAAAACTTGAAGGGCAATATCCTGTGAGAGGATTGTACCAAGCACTGGCTATTGCTGCAATGTGCGTTCAAGAACAGCCTAATATGCGGCCTGTCGTGAGAGATGTGGTTACTGCTCTAAATTACCTTGCTTCACAGAAATACGATCCCAGCGTCGATTCACTCAAAAGTCCCTGTTCGCCGAGACTAAAAAGAGACAGTGATAGAGGCAGTATTGCAGCTGAATAG 1044 41.48 MDVKGLNMEDEISKDGKVKGNRAQTFSFLELTAATGNFRSNCFLGEGGFGKVYKGYIEGVNQVVAIKQLDRNGHQGIREFVVEILTLSMADHPNLVKLLGFCAEEDQRLLVYEYMPLGSLENHLHDIPPGGKVLDWQTRMKIAAGAARGLEYLHEKMKPPVIYRDLKCSNILLGEEYYPKLSDFGLAKVGPSGDNTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDQTKPPKEQNLVAWARPLFRDRKKFSLMVDPKLEGQYPVRGLYQALAIAAMCVQEQPNMRPVVRDVVTALNYLASQKYDPSVDSLKSPCSPRLKRDSDRGSIAAE 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 924750 926437 - Bpe000157.1 Bpe01g00159 97407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe01g00159 347 SMART serkin_6 38 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00159 347 CDD STKc_IRAK 44 313 - -
Bpe01g00159 347 PIRSF ILK 2 322 - -
Bpe01g00159 347 MobiDBLite consensus disorder prediction 322 347 - -
Bpe01g00159 347 PANTHER OS07G0668900 PROTEIN 4 328 - -
Bpe01g00159 347 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 4 328 - -
Bpe01g00159 347 SUPERFAMILY Protein kinase-like (PK-like) 24 333 IPR011009 -
Bpe01g00159 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bpe01g00159 347 MobiDBLite consensus disorder prediction 331 347 - -
Bpe01g00159 347 Gene3D Phosphorylase Kinase; domain 1 8 114 - -
Bpe01g00159 347 Gene3D Transferase(Phosphotransferase) domain 1 115 329 - -
Bpe01g00159 347 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Bpe01g00159 347 ProSiteProfiles Protein kinase domain profile. 38 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe01g00159 347 Pfam Protein kinase domain 43 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00159 Bpe08g01344 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00159 Bpe-Chr1:924750 Bpe04g01126 Bpe-Chr4:9758205 4.84E-170 dispersed
Bpe01g00159 Bpe-Chr1:924750 Bpe15g01082 Bpe-Chr15:20012053 0 wgd
Bpe01g00159 Bpe-Chr1:924750 Bpe02g00809 Bpe-Chr2:5954976 2.51E-178 wgd
Bpe01g00159 Bpe-Chr1:924750 Bpe08g01344 Bpe-Chr8:14594817 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63102 PF00069 Pkinase 1.10E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe01g00159 - - bhj:120083806 581.252